The gene/protein map for NC_004556 is currently unavailable.
Definition Xylella fastidiosa Temecula1, complete genome.
Accession NC_004556
Length 2,519,802

Click here to switch to the map view.

The map label for this gene is 28199136

Identifier: 28199136

GI number: 28199136

Start: 1459289

End: 1459681

Strand: Reverse

Name: 28199136

Synonym: PD1250

Alternate gene names: NA

Gene position: 1459681-1459289 (Counterclockwise)

Preceding gene: 28199140

Following gene: 28199135

Centisome position: 57.93

GC content: 37.91

Gene sequence:

>393_bases
ATGTTAACGCAAGAACAAATAGATATTATTCGTGAGGGTCCAGACTATTTCTTGGAAAGTATTTGGTTTCGTATAGGACA
GCTGTATGGCCTTTCACCTGGGCAAATAGATCATGATTCATTTGAAGAAAGGAAAAATGATTTATTCTTTTTACTTGGAA
AATTACTTGATGAAGGACAGATCAAAATTGGTAACCATAAAGGGAACTTTATCTCTGGGCCTACCCCGGCACTGGTGGAG
ATGTTCAGAAGTTCTTTTCCTGATTCAGATGAAAAAGCGCAAGCGATTTGGTTTATTACAGAGTGTCCTGGTGGAATAGT
ATGGGTGTTAAAAGGACAAGGCGAAAAAGGTCAAGATGTTTACAAGTGGTGGCTTTTTAAGGATGAAAAATAG

Upstream 100 bases:

>100_bases
GCGTCCCCAAAGAGCGATACCTGTGGCAATATTAATTAGAGAAAATAATCGTATTTTATTCAAATTATTTTTATTTTTTA
AATTAAAACAAGGAGATTTT

Downstream 100 bases:

>100_bases
ATTATTGTATGTATAAAGATAAAAGTGACACAGTATGTGAATTTTCAGGAGAAAGTGATGAGTGATACTGCCAAAGTTAT
TGAATCACAAGAATTAACTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MLTQEQIDIIREGPDYFLESIWFRIGQLYGLSPGQIDHDSFEERKNDLFFLLGKLLDEGQIKIGNHKGNFISGPTPALVE
MFRSSFPDSDEKAQAIWFITECPGGIVWVLKGQGEKGQDVYKWWLFKDEK

Sequences:

>Translated_130_residues
MLTQEQIDIIREGPDYFLESIWFRIGQLYGLSPGQIDHDSFEERKNDLFFLLGKLLDEGQIKIGNHKGNFISGPTPALVE
MFRSSFPDSDEKAQAIWFITECPGGIVWVLKGQGEKGQDVYKWWLFKDEK
>Mature_130_residues
MLTQEQIDIIREGPDYFLESIWFRIGQLYGLSPGQIDHDSFEERKNDLFFLLGKLLDEGQIKIGNHKGNFISGPTPALVE
MFRSSFPDSDEKAQAIWFITECPGGIVWVLKGQGEKGQDVYKWWLFKDEK

Specific function: Unknown

COG id: COG3792

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15015; Mature: 15015

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTQEQIDIIREGPDYFLESIWFRIGQLYGLSPGQIDHDSFEERKNDLFFLLGKLLDEGQ
CCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
IKIGNHKGNFISGPTPALVEMFRSSFPDSDEKAQAIWFITECPGGIVWVLKGQGEKGQDV
EEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCE
YKWWLFKDEK
EEEEEEECCC
>Mature Secondary Structure
MLTQEQIDIIREGPDYFLESIWFRIGQLYGLSPGQIDHDSFEERKNDLFFLLGKLLDEGQ
CCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
IKIGNHKGNFISGPTPALVEMFRSSFPDSDEKAQAIWFITECPGGIVWVLKGQGEKGQDV
EEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCE
YKWWLFKDEK
EEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA