Definition | Xylella fastidiosa Temecula1, complete genome. |
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Accession | NC_004556 |
Length | 2,519,802 |
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The map label for this gene is 28199071
Identifier: 28199071
GI number: 28199071
Start: 1381948
End: 1382265
Strand: Reverse
Name: 28199071
Synonym: PD1181
Alternate gene names: NA
Gene position: 1382265-1381948 (Counterclockwise)
Preceding gene: 28199072
Following gene: 28199070
Centisome position: 54.86
GC content: 59.43
Gene sequence:
>318_bases ATGTGGCAGATTCCCGTGGATAGCAGCGCGTATCAGACCCAGTCGTTTCGCGTAGGTGCCGAGTCCCTACGCTTGATCCT GCGATGGAATCCGGTCCCGTGTTGCTGGTCGATGGACCTGTACACCGCGACCCTAGATCAGCCCGTGGCGCAAGGCGTCC CCCTGGTGGTGGGCGTCCCCCTGCTGTGGCGGCGTCCTGTGGATTACTTCTTTTGGCTGACAGATGAAAGCGGTTTAGAG ATGGACCCGATGCGCCACGATGACCTGGGCGAACGCTGCTTGCTGTTTGTTGGATTAAAAGAGCAGGTCCGCCCATGA
Upstream 100 bases:
>100_bases CCCAAGGCGCGGCGCAACGCCACAGCGGCCAGACCCACCCTAAGCCGGTGGACACCGAGAAGAACCGCTCCTTACTGCGT CAGATGTCTGGACTGTTCTG
Downstream 100 bases:
>100_bases AACAGTTTGGCCGCCAGTATCGCCTGGAGCTGGGGTCCAGCCACGATGGGATTGCCATCGACACCCTGCGCATCGCCTTT GACATCCGTAAAACCAGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 105; Mature: 105
Protein sequence:
>105_residues MWQIPVDSSAYQTQSFRVGAESLRLILRWNPVPCCWSMDLYTATLDQPVAQGVPLVVGVPLLWRRPVDYFFWLTDESGLE MDPMRHDDLGERCLLFVGLKEQVRP
Sequences:
>Translated_105_residues MWQIPVDSSAYQTQSFRVGAESLRLILRWNPVPCCWSMDLYTATLDQPVAQGVPLVVGVPLLWRRPVDYFFWLTDESGLE MDPMRHDDLGERCLLFVGLKEQVRP >Mature_105_residues MWQIPVDSSAYQTQSFRVGAESLRLILRWNPVPCCWSMDLYTATLDQPVAQGVPLVVGVPLLWRRPVDYFFWLTDESGLE MDPMRHDDLGERCLLFVGLKEQVRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12154; Mature: 12154
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWQIPVDSSAYQTQSFRVGAESLRLILRWNPVPCCWSMDLYTATLDQPVAQGVPLVVGVP CCCCCCCCCCCCCCEEEECHHHEEEEEEECCCCEEEECCEEEECCCCHHHCCCCEEECCC LLWRRPVDYFFWLTDESGLEMDPMRHDDLGERCLLFVGLKEQVRP CHHCCCCCEEEEEECCCCCEECCCCCCCCCCEEEEEEECHHHCCC >Mature Secondary Structure MWQIPVDSSAYQTQSFRVGAESLRLILRWNPVPCCWSMDLYTATLDQPVAQGVPLVVGVP CCCCCCCCCCCCCCEEEECHHHEEEEEEECCCCEEEECCEEEECCCCHHHCCCCEEECCC LLWRRPVDYFFWLTDESGLEMDPMRHDDLGERCLLFVGLKEQVRP CHHCCCCCEEEEEECCCCCEECCCCCCCCCCEEEEEEECHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA