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The map label for this gene is B

Identifier: 28198999

GI number: 28198999

Start: 1302952

End: 1304478

Strand: Reverse

Name: B

Synonym: PD1107

Alternate gene names: NA

Gene position: 1304478-1302952 (Counterclockwise)

Preceding gene: 28199000

Following gene: 28198998

Centisome position: 51.77

GC content: 57.69

Gene sequence:

>1527_bases
ATGAACCTCTGGACATGGTGGACACAGCGCACAGCCCAGCCAGATCACCCCACCCCAGACACGGCAACACCCCAGCCAAA
CCACCCCCCGCGGCGCTGGTATCAGCGCATGCTGCCCTTAGGCGGCATGTTCAAAGCAGGGCAGGTGGATACCAATGACC
TGTGGAGCAGCATCCCCGTCTCCCCGGACGAATACATCACCCAACGTCTTCCAATCCTGGTCGCGCGCATGCGCGAACAA
TGGTCCAACAACGACCATGTCAAACGGTACATTGACCTATGCCGCCGTAACATTGTGGGCCCCCGCGGCATCGTCATGCA
GGCCCAAAGCAGAAAATCGCGCAGCGGTGCCCTGGACACCGCCATCAACGACGCCATTGAAACCTGGTGGCAAGACTGGG
GCCGCAAAGGCCAGTGTGAAGTCACCGGAAAATTATCATGGCGCGAAATCCAAACCCTCTGCGTAGAGACCTGCGCCCGT
GATGGAGAGTTTATTGCCCGAAAAATCTATGGCACACACGCCGGACCGCATGGCTTTTGCTTACAACTGATCGACCCACT
GCGCCTACCCGTGCGCTACCAAATGCTGAAAACAGACCAGACCGGCGGATTTGTCCGACAAGGCATCGAATTTAACCGAT
TCGGAAAACCGCTGGCCTACCACTTCAGCTCCATTGACGAACGTGACACCTACTACTACAGCATCAATGGACGAGGCTAC
ATCCGCGTCCCCGCCGAGGAAGTCATCCACATCTTCAAACCCGTGATGGTGGGACAACGCCGCGGCCTACCTTGGGCCGC
CACCTCCCTACTGCGTCTACACCATCTACAAGGCTTTGAAGAAGCCGCCGTACAAAACGCACGCGCCGCCGCTAGCAAAA
TGGGTTTTGTCTGCTACCCAGAGGGTGTTGGACCGCGAGCCGACGAACAGGAAAACGTTGCCCAAACCATCCAGATGAAC
GCTGGACCCTTAGCCATCCACGAACTCCCCCAAGGCGCAGAATTTCAAGACTGGAACCCCCAATACCCCTCAGGTGAATT
TGGCTTATTCACCAAAGCCGCCAAACAAAGCTTGGCTGCGGGCATGGATCTCTCCTACCACGCCCTTTCCGGCGATCTAG
CGGACGTCAACTACTCCAGCATCCGCCAAGGCACATTGGATGAACGCGAACGCTGGAAAGAAGACCAGCAATTTTTTATT
GAATCCCTCCACACCCCTGTTTTTGAAGCGGCCTTGAAAGTGGCCTTGCTGAGCGGACAGATTCGCGTGCATGGCAAACC
ACTGCCTGCCGAACACTACGACCGATACCGCCGCGTTTCCTGGCAAGGCCGCCGCTGGGCCTGGGTCGACCCCCGCACCG
ACGTTGAAAGCGCACTGACCTGCATCCGTGGCGGCCTGACCTCCACCAGCCAAGTCATCCTGGAACAAGGCCGCGACCCC
CAGGACGTCTTTCGCGAAATCGCCCAAGACCTGAAAGAAATGCAAGCCTCCGGCATCCCCAACGACTACCTCAAGTACCT
GCTGTAG

Upstream 100 bases:

>100_bases
TGCTGAAACTACGCACCTTCTACGCCGTAGCCGTACAACGCGAAACACCCACCGACACCCCCCGCAGCTGGGGGAACATC
GTTCCTGTGAGGTTTGTAGG

Downstream 100 bases:

>100_bases
GGCGCAGACCTCACTACCGCCAACACCACACCGACCCAGAAGGAACCCACCCCCCATGACCACAGCCACTGAGGTAGTAC
GGGACCTTCGCAAAGGCGGC

Product: phage-related portal protein

Products: NA

Alternate protein names: Lambda Family Phage Portal Protein; Phage Portal Protein; Phage Portal Protein Lambda; Bacteriophage Capsid Protein; Portal Protein Lambda Family; Portal Protein; Phage-Related Portal Protein; Phage Portal Protein Of Lambda Family; Portal Protein B; Portal Protein Putative Prophage; Bacteriophage-Related Protein; Prophage; Portal Protein GPB Of Phage Lambda; Head-Tail Preconnector Protein Phage Origin; Phage Protein Gp; Phage Portal Protein Lambda Family Protein

Number of amino acids: Translated: 508; Mature: 508

Protein sequence:

>508_residues
MNLWTWWTQRTAQPDHPTPDTATPQPNHPPRRWYQRMLPLGGMFKAGQVDTNDLWSSIPVSPDEYITQRLPILVARMREQ
WSNNDHVKRYIDLCRRNIVGPRGIVMQAQSRKSRSGALDTAINDAIETWWQDWGRKGQCEVTGKLSWREIQTLCVETCAR
DGEFIARKIYGTHAGPHGFCLQLIDPLRLPVRYQMLKTDQTGGFVRQGIEFNRFGKPLAYHFSSIDERDTYYYSINGRGY
IRVPAEEVIHIFKPVMVGQRRGLPWAATSLLRLHHLQGFEEAAVQNARAAASKMGFVCYPEGVGPRADEQENVAQTIQMN
AGPLAIHELPQGAEFQDWNPQYPSGEFGLFTKAAKQSLAAGMDLSYHALSGDLADVNYSSIRQGTLDERERWKEDQQFFI
ESLHTPVFEAALKVALLSGQIRVHGKPLPAEHYDRYRRVSWQGRRWAWVDPRTDVESALTCIRGGLTSTSQVILEQGRDP
QDVFREIAQDLKEMQASGIPNDYLKYLL

Sequences:

>Translated_508_residues
MNLWTWWTQRTAQPDHPTPDTATPQPNHPPRRWYQRMLPLGGMFKAGQVDTNDLWSSIPVSPDEYITQRLPILVARMREQ
WSNNDHVKRYIDLCRRNIVGPRGIVMQAQSRKSRSGALDTAINDAIETWWQDWGRKGQCEVTGKLSWREIQTLCVETCAR
DGEFIARKIYGTHAGPHGFCLQLIDPLRLPVRYQMLKTDQTGGFVRQGIEFNRFGKPLAYHFSSIDERDTYYYSINGRGY
IRVPAEEVIHIFKPVMVGQRRGLPWAATSLLRLHHLQGFEEAAVQNARAAASKMGFVCYPEGVGPRADEQENVAQTIQMN
AGPLAIHELPQGAEFQDWNPQYPSGEFGLFTKAAKQSLAAGMDLSYHALSGDLADVNYSSIRQGTLDERERWKEDQQFFI
ESLHTPVFEAALKVALLSGQIRVHGKPLPAEHYDRYRRVSWQGRRWAWVDPRTDVESALTCIRGGLTSTSQVILEQGRDP
QDVFREIAQDLKEMQASGIPNDYLKYLL
>Mature_508_residues
MNLWTWWTQRTAQPDHPTPDTATPQPNHPPRRWYQRMLPLGGMFKAGQVDTNDLWSSIPVSPDEYITQRLPILVARMREQ
WSNNDHVKRYIDLCRRNIVGPRGIVMQAQSRKSRSGALDTAINDAIETWWQDWGRKGQCEVTGKLSWREIQTLCVETCAR
DGEFIARKIYGTHAGPHGFCLQLIDPLRLPVRYQMLKTDQTGGFVRQGIEFNRFGKPLAYHFSSIDERDTYYYSINGRGY
IRVPAEEVIHIFKPVMVGQRRGLPWAATSLLRLHHLQGFEEAAVQNARAAASKMGFVCYPEGVGPRADEQENVAQTIQMN
AGPLAIHELPQGAEFQDWNPQYPSGEFGLFTKAAKQSLAAGMDLSYHALSGDLADVNYSSIRQGTLDERERWKEDQQFFI
ESLHTPVFEAALKVALLSGQIRVHGKPLPAEHYDRYRRVSWQGRRWAWVDPRTDVESALTCIRGGLTSTSQVILEQGRDP
QDVFREIAQDLKEMQASGIPNDYLKYLL

Specific function: Unknown

COG id: COG5511

COG function: function code R; Bacteriophage capsid protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58010; Mature: 58010

Theoretical pI: Translated: 7.86; Mature: 7.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLWTWWTQRTAQPDHPTPDTATPQPNHPPRRWYQRMLPLGGMFKAGQVDTNDLWSSIPV
CCCEECHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCC
SPDEYITQRLPILVARMREQWSNNDHVKRYIDLCRRNIVGPRGIVMQAQSRKSRSGALDT
CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEECHHCCCCCCCHHH
AINDAIETWWQDWGRKGQCEVTGKLSWREIQTLCVETCARDGEFIARKIYGTHAGPHGFC
HHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHH
LQLIDPLRLPVRYQMLKTDQTGGFVRQGIEFNRFGKPLAYHFSSIDERDTYYYSINGRGY
HHHHHHHCCCHHHHHHHCCCCCHHHHHCCCHHHCCCHHHHHHHCCCCCCCEEEEECCCEE
IRVPAEEVIHIFKPVMVGQRRGLPWAATSLLRLHHLQGFEEAAVQNARAAASKMGFVCYP
EECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEC
EGVGPRADEQENVAQTIQMNAGPLAIHELPQGAEFQDWNPQYPSGEFGLFTKAAKQSLAA
CCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
GMDLSYHALSGDLADVNYSSIRQGTLDERERWKEDQQFFIESLHTPVFEAALKVALLSGQ
CCCCEEHHCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCE
IRVHGKPLPAEHYDRYRRVSWQGRRWAWVDPRTDVESALTCIRGGLTSTSQVILEQGRDP
EEECCCCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCH
QDVFREIAQDLKEMQASGIPNDYLKYLL
HHHHHHHHHHHHHHHHCCCCHHHHHHHC
>Mature Secondary Structure
MNLWTWWTQRTAQPDHPTPDTATPQPNHPPRRWYQRMLPLGGMFKAGQVDTNDLWSSIPV
CCCEECHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCC
SPDEYITQRLPILVARMREQWSNNDHVKRYIDLCRRNIVGPRGIVMQAQSRKSRSGALDT
CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEECHHCCCCCCCHHH
AINDAIETWWQDWGRKGQCEVTGKLSWREIQTLCVETCARDGEFIARKIYGTHAGPHGFC
HHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHH
LQLIDPLRLPVRYQMLKTDQTGGFVRQGIEFNRFGKPLAYHFSSIDERDTYYYSINGRGY
HHHHHHHCCCHHHHHHHCCCCCHHHHHCCCHHHCCCHHHHHHHCCCCCCCEEEEECCCEE
IRVPAEEVIHIFKPVMVGQRRGLPWAATSLLRLHHLQGFEEAAVQNARAAASKMGFVCYP
EECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEC
EGVGPRADEQENVAQTIQMNAGPLAIHELPQGAEFQDWNPQYPSGEFGLFTKAAKQSLAA
CCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
GMDLSYHALSGDLADVNYSSIRQGTLDERERWKEDQQFFIESLHTPVFEAALKVALLSGQ
CCCCEEHHCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCE
IRVHGKPLPAEHYDRYRRVSWQGRRWAWVDPRTDVESALTCIRGGLTSTSQVILEQGRDP
EEECCCCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCH
QDVFREIAQDLKEMQASGIPNDYLKYLL
HHHHHHHHHHHHHHHHCCCCHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA