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The map label for this gene is W

Identifier: 28198990

GI number: 28198990

Start: 1297745

End: 1298068

Strand: Reverse

Name: W

Synonym: PD1098

Alternate gene names: NA

Gene position: 1298068-1297745 (Counterclockwise)

Preceding gene: 28198993

Following gene: 28198989

Centisome position: 51.51

GC content: 61.73

Gene sequence:

>324_bases
ATGCACACCGGAAAGCCGCTTGATGGCATCGACCACCTGCGCCAATCGGTACAGAACATCTTGAGCACCCCATTAGGGAG
CCGGATCATGCGCCGTGATTACGGCAGCCGACTACCACACCTGCTTGATGCCCCGATCACACGTGCCCTGACAATGGACC
TGTACGCGGCCACCGCACAAGCCCTTGCCGCACACGAGCCACGGATCACCCTGCGGCAAGTGACGGCCCGCGCCACCGCA
TCGGGCACGGTAACCCTTGTGTTGACTGCCCACTACCTTCCTGAGGGGAAAACCGTCACCCTAGACGGCATCCAGGTGCG
TTGA

Upstream 100 bases:

>100_bases
CACTCTGCGTCATTGCCAAGTGCATTGAGCCTTCGGAAAACCCGCCACAGGACACCGCCCAGTGAGTCCCCCCAAGCTGC
TGAGCATGCGCGGAATGAAC

Downstream 100 bases:

>100_bases
TGGACAACACTCTGACGGCGATTGACATCTCCAAGCTGCCCATGCCTGATGTCATCCGGCAAGTGGCCGCAGACGTGATC
TTGCAAGAGATGCTGGCTGA

Product: phage-related baseplate assembly protein

Products: NA

Alternate protein names: Baseplate Assembly Protein W; GPW/Gp; Phage Baseplate Assembly Protein; Baseplate Assembly Protein GpW; Pyocin R2_PP Baseplate Protein; Phage P2 Baseplate Assembly GpW-Like Protein; Phage Baseplate Assembly; Bacteriophage P2 Baseplate Assembly Protein GPW; Phage-Related Baseplate Assembly Protein; Bacteriophage Protein; Phage P2 Baseplate Assembly W Protein; Bacteriophage Baseplate Assembly Protein W; Phage Protein Gp; Prophage Baseplate Protein; Prophage LambdaW1 Baseplate Assembly Protein W

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MHTGKPLDGIDHLRQSVQNILSTPLGSRIMRRDYGSRLPHLLDAPITRALTMDLYAATAQALAAHEPRITLRQVTARATA
SGTVTLVLTAHYLPEGKTVTLDGIQVR

Sequences:

>Translated_107_residues
MHTGKPLDGIDHLRQSVQNILSTPLGSRIMRRDYGSRLPHLLDAPITRALTMDLYAATAQALAAHEPRITLRQVTARATA
SGTVTLVLTAHYLPEGKTVTLDGIQVR
>Mature_107_residues
MHTGKPLDGIDHLRQSVQNILSTPLGSRIMRRDYGSRLPHLLDAPITRALTMDLYAATAQALAAHEPRITLRQVTARATA
SGTVTLVLTAHYLPEGKTVTLDGIQVR

Specific function: Unknown

COG id: COG3628

COG function: function code R; Phage baseplate assembly protein W

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11665; Mature: 11665

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTGKPLDGIDHLRQSVQNILSTPLGSRIMRRDYGSRLPHLLDAPITRALTMDLYAATAQ
CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHHHH
ALAAHEPRITLRQVTARATASGTVTLVLTAHYLPEGKTVTLDGIQVR
HHHHCCCCHHHHHHHHHCCCCCEEEEEEEEEECCCCCEEEECCEEEC
>Mature Secondary Structure
MHTGKPLDGIDHLRQSVQNILSTPLGSRIMRRDYGSRLPHLLDAPITRALTMDLYAATAQ
CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHHHH
ALAAHEPRITLRQVTARATASGTVTLVLTAHYLPEGKTVTLDGIQVR
HHHHCCCCHHHHHHHHHCCCCCEEEEEEEEEECCCCCEEEECCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA