Definition | Xylella fastidiosa Temecula1, complete genome. |
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Accession | NC_004556 |
Length | 2,519,802 |
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The map label for this gene is I
Identifier: 28198988
GI number: 28198988
Start: 1296302
End: 1296859
Strand: Reverse
Name: I
Synonym: PD1096
Alternate gene names: NA
Gene position: 1296859-1296302 (Counterclockwise)
Preceding gene: 28198989
Following gene: 77747678
Centisome position: 51.47
GC content: 60.04
Gene sequence:
>558_bases ATGAATGAACCCCTGCACAGCCTGCTTCCCCCCACGGCAACACCGCTCATGCGCACCCTGGAGCAAGTGATGGCACGCAT GGCTGACATCCCGATCCCATTCAAACAACTATGGGACCCGCACACCTGCCCCGAGCCATTACTCCCCTGGCTGGCCTGGT CATTGTCCGTGGACACCTGGCGCAGCACGTGGCCCGTGCATATCAAACGCGCGCGTATTGCAGCAGCCATCGAGATTCAG CGTTGCAAAGGCAGCGTTAAAAGTGTGCGCGATGTGGTGCGCAGCTTTGGCGGAGACGTCCTCATCACCGAATGGTGGCA ACAAAACCCACCGGCTGCACCGCACACCTTCACACTGCTGCTCACCTTATCCGGGCAAGGCGGCAGCCAGAGCACCGCCG AATTTGTCGCAGATGTCATTACAGAAGTCATCCGCACCAAACCCGTTCGCAGCCATTTCACCTTTACCCAGGGCGTGCAC ACCATCGGACAGATTGGCCTGCTGGGTGGCGCACAGATCACCGCGTACCGACGCCTACACCTCACCCAGGCCGCATGA
Upstream 100 bases:
>100_bases ATCCAACGCGTAGAACTCATCACACCACAACAGGGACTGACGATGGACCGTACCCAGGCGGCCCGCTGCACCAACATCAC CGTCGTGCATGGTGGCGTGG
Downstream 100 bases:
>100_bases GGATGTTATGACCCCACTCCAAATCACCATCACCCCCCAGGGCCGCGCCGCCCTAGTGAACGCCCAACATCATGGCACCG TCCCCGTGCGGCTGGCCTCT
Product: phage-related tail protein
Products: NA
Alternate protein names: Tail Protein I; Phage Tail Protein; Phage-Related Tail Protein; Bacteriophage P2-Related Tail Formation Protein; Tail Protein I Prophage; Phage P2 Baseplate Assembly GpI-Like Protein; Prophage Tail Protein; Bacteriophage Protein; Bacteriophage Tail Protein I; Tail Formation-Like Protein; Bacteriophage P2 Baseplate Assembly Protein GPI; Bacteriophage P2-Related Tail Formation Protein GpI; Bacteriophage Tail Formation Protein I; Pyocin R2_PP Tail Formation Protein GpI
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MNEPLHSLLPPTATPLMRTLEQVMARMADIPIPFKQLWDPHTCPEPLLPWLAWSLSVDTWRSTWPVHIKRARIAAAIEIQ RCKGSVKSVRDVVRSFGGDVLITEWWQQNPPAAPHTFTLLLTLSGQGGSQSTAEFVADVITEVIRTKPVRSHFTFTQGVH TIGQIGLLGGAQITAYRRLHLTQAA
Sequences:
>Translated_185_residues MNEPLHSLLPPTATPLMRTLEQVMARMADIPIPFKQLWDPHTCPEPLLPWLAWSLSVDTWRSTWPVHIKRARIAAAIEIQ RCKGSVKSVRDVVRSFGGDVLITEWWQQNPPAAPHTFTLLLTLSGQGGSQSTAEFVADVITEVIRTKPVRSHFTFTQGVH TIGQIGLLGGAQITAYRRLHLTQAA >Mature_185_residues MNEPLHSLLPPTATPLMRTLEQVMARMADIPIPFKQLWDPHTCPEPLLPWLAWSLSVDTWRSTWPVHIKRARIAAAIEIQ RCKGSVKSVRDVVRSFGGDVLITEWWQQNPPAAPHTFTLLLTLSGQGGSQSTAEFVADVITEVIRTKPVRSHFTFTQGVH TIGQIGLLGGAQITAYRRLHLTQAA
Specific function: Unknown
COG id: COG4385
COG function: function code R; Bacteriophage P2-related tail formation protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20602; Mature: 20602
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEPLHSLLPPTATPLMRTLEQVMARMADIPIPFKQLWDPHTCPEPLLPWLAWSLSVDTW CCCCCHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCC RSTWPVHIKRARIAAAIEIQRCKGSVKSVRDVVRSFGGDVLITEWWQQNPPAAPHTFTLL CCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEHHHCCCCCCCCCEEEEE LTLSGQGGSQSTAEFVADVITEVIRTKPVRSHFTFTQGVHTIGQIGLLGGAQITAYRRLH EEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH LTQAA HHCCC >Mature Secondary Structure MNEPLHSLLPPTATPLMRTLEQVMARMADIPIPFKQLWDPHTCPEPLLPWLAWSLSVDTW CCCCCHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCC RSTWPVHIKRARIAAAIEIQRCKGSVKSVRDVVRSFGGDVLITEWWQQNPPAAPHTFTLL CCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEHHHCCCCCCCCCEEEEE LTLSGQGGSQSTAEFVADVITEVIRTKPVRSHFTFTQGVHTIGQIGLLGGAQITAYRRLH EEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH LTQAA HHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA