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The map label for this gene is FII

Identifier: 28198985

GI number: 28198985

Start: 1292950

End: 1293459

Strand: Reverse

Name: FII

Synonym: PD1093

Alternate gene names: NA

Gene position: 1293459-1292950 (Counterclockwise)

Preceding gene: 28198986

Following gene: 28198984

Centisome position: 51.33

GC content: 52.16

Gene sequence:

>510_bases
ATGTCCGCACCGCGTCATATCCTCAAACACCTCAACCTGTTTATTGATGGCAAAGGCTATGCAGGGCAGGTCGAAGACAT
CAACCTGCCAAAATTGACCTTAAAAACCGAAGAGTTTCGGGGTGGCGGCATGCTGGCCCCTGTAGAACTCACGATGGGCA
TGGAGAAGCTAGAAACCGATGTCAGCTTGATTTGCTACAGCAGCGACGCACTCCTGCTGTTCGGCGTTACCGAAGGAAAG
CAGGTGAACTGCACCGTGCGTGGCTTTCTGGAATCCTTCGATGGGACGACAACATCCCTTGCGATCCATCTGCGCGGCAA
AGTCAAAGAAATCGATCGCGGCACCTGGAAACCGCCGGACAAATCCAGCCTAAAACTGGCCTTGGCACTGAGCTACTACA
AAGAAGTGCATAACGCCACCGTCATTCATGAAATCGACATAGAAAACATGATCTTCCAGCAAAACGGCATTGATCTGCTC
GCCCCCGCTCGCAACGCACTAGGACTCTAA

Upstream 100 bases:

>100_bases
GACACGTCTATTTTAATTTTGACTTCACCCCGGCCTATCCGGCCGAACACATCACCTTCCGTAGTCGGCTCACCAGTGAT
TATCTTGTGGAGGTGTTCTA

Downstream 100 bases:

>100_bases
CCATGACCGGACCGACCACTGATAAACCGTACATCCGCGAAGCAGAAGGCGGCGTACGCATCACCTTAGCCTCACCCGTC
AGCATCAATGGCACCACCGT

Product: hypothetical protein

Products: NA

Alternate protein names: Tail Tube Protein; Phage Tail Tube Protein FII; Contractile Tail Tube Protein; Tail Fiber Component Of Prophage; Phage Tail Tube Protein; Tail Tube Protein FII; Pyocin R2_PP Tail Tube Protein GpFII; Phage-Related Tail Protein; Prophage Tail Tube Protein; Phage P2 FII-Like Protein; Phage-Related Tail Tube Protein; Bacteriophage Tail Tube Protein FII; Bacteriophage-Related Tail Tube FII Protein; Bacteriophage P2 Tail Sheath Protein GPFII; Phage Tail Protein; Phage Tail Tube-Like Protein; Pyocin R2_PP Tail Tube Protein

Number of amino acids: Translated: 169; Mature: 168

Protein sequence:

>169_residues
MSAPRHILKHLNLFIDGKGYAGQVEDINLPKLTLKTEEFRGGGMLAPVELTMGMEKLETDVSLICYSSDALLLFGVTEGK
QVNCTVRGFLESFDGTTTSLAIHLRGKVKEIDRGTWKPPDKSSLKLALALSYYKEVHNATVIHEIDIENMIFQQNGIDLL
APARNALGL

Sequences:

>Translated_169_residues
MSAPRHILKHLNLFIDGKGYAGQVEDINLPKLTLKTEEFRGGGMLAPVELTMGMEKLETDVSLICYSSDALLLFGVTEGK
QVNCTVRGFLESFDGTTTSLAIHLRGKVKEIDRGTWKPPDKSSLKLALALSYYKEVHNATVIHEIDIENMIFQQNGIDLL
APARNALGL
>Mature_168_residues
SAPRHILKHLNLFIDGKGYAGQVEDINLPKLTLKTEEFRGGGMLAPVELTMGMEKLETDVSLICYSSDALLLFGVTEGKQ
VNCTVRGFLESFDGTTTSLAIHLRGKVKEIDRGTWKPPDKSSLKLALALSYYKEVHNATVIHEIDIENMIFQQNGIDLLA
PARNALGL

Specific function: Unknown

COG id: COG3498

COG function: function code R; Phage tail tube protein FII

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18629; Mature: 18498

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAPRHILKHLNLFIDGKGYAGQVEDINLPKLTLKTEEFRGGGMLAPVELTMGMEKLETD
CCCHHHHHHHCEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEHHHCCHHHHCCC
VSLICYSSDALLLFGVTEGKQVNCTVRGFLESFDGTTTSLAIHLRGKVKEIDRGTWKPPD
EEEEEECCCEEEEEEECCCCEEEEEHEEHHHHCCCCEEEEEEEECCCEEECCCCCCCCCC
KSSLKLALALSYYKEVHNATVIHEIDIENMIFQQNGIDLLAPARNALGL
CCCEEEEEHHHHHHHHHCCEEEEEECCCCEEEECCCCEEEECCHHHCCC
>Mature Secondary Structure 
SAPRHILKHLNLFIDGKGYAGQVEDINLPKLTLKTEEFRGGGMLAPVELTMGMEKLETD
CCHHHHHHHCEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEHHHCCHHHHCCC
VSLICYSSDALLLFGVTEGKQVNCTVRGFLESFDGTTTSLAIHLRGKVKEIDRGTWKPPD
EEEEEECCCEEEEEEECCCCEEEEEHEEHHHHCCCCEEEEEEEECCCEEECCCCCCCCCC
KSSLKLALALSYYKEVHNATVIHEIDIENMIFQQNGIDLLAPARNALGL
CCCEEEEEHHHHHHHHHCCEEEEEECCCCEEEECCCCEEEECCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA