Definition | Xylella fastidiosa Temecula1, complete genome. |
---|---|
Accession | NC_004556 |
Length | 2,519,802 |
Click here to switch to the map view.
The map label for this gene is X
Identifier: 28198981
GI number: 28198981
Start: 1289620
End: 1289838
Strand: Reverse
Name: X
Synonym: PD1089
Alternate gene names: NA
Gene position: 1289838-1289620 (Counterclockwise)
Preceding gene: 28198982
Following gene: 28198980
Centisome position: 51.19
GC content: 59.82
Gene sequence:
>219_bases GTGAGCCTGCACACCTATCTCACACGCCACGGTGACACCGTCGACTGGCTCGCATGGAAGTATTACGCACGCACCGATGC CACCATCATCTCGGCGATTTATGAAGCAAACCACGGCTTAGCCGCATGGGGGCCCGTGCTGCCGGAAGGCATCGCGATCA CCTTGCCAGACCCTGTGGCCACACCGCGCACCATTCCAGGAGTCACATTGTGGGAGTAA
Upstream 100 bases:
>100_bases AACGCCAAAGCGACCATCACCCCAACGGCACACCACGGCGCATTGAATTCACACTCGCCTTACAACGCGTCAACGATGAC CACGCCGTAGAGGCCACCCC
Downstream 100 bases:
>100_bases CGCCCTGCTACCGGCTCATCGCCAACGACAACGATATTACCGCCCTCATCACCGAACGCATGGCAAGCCTACAGCTTTCC GATGAGTCCGGAAGCCATGC
Product: phage-related tail protein
Products: NA
Alternate protein names: Phage Tail Protein
Number of amino acids: Translated: 72; Mature: 71
Protein sequence:
>72_residues MSLHTYLTRHGDTVDWLAWKYYARTDATIISAIYEANHGLAAWGPVLPEGIAITLPDPVATPRTIPGVTLWE
Sequences:
>Translated_72_residues MSLHTYLTRHGDTVDWLAWKYYARTDATIISAIYEANHGLAAWGPVLPEGIAITLPDPVATPRTIPGVTLWE >Mature_71_residues SLHTYLTRHGDTVDWLAWKYYARTDATIISAIYEANHGLAAWGPVLPEGIAITLPDPVATPRTIPGVTLWE
Specific function: Unknown
COG id: COG5004
COG function: function code R; P2-like prophage tail protein X
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7976; Mature: 7845
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLHTYLTRHGDTVDWLAWKYYARTDATIISAIYEANHGLAAWGPVLPEGIAITLPDPVA CCCCCCEECCCCEECCEEEEEECCCCHHHHHHHHHCCCCCEECCCCCCCCEEEECCCCCC TPRTIPGVTLWE CCCCCCCEEECC >Mature Secondary Structure SLHTYLTRHGDTVDWLAWKYYARTDATIISAIYEANHGLAAWGPVLPEGIAITLPDPVA CCCCCEECCCCEECCEEEEEECCCCHHHHHHHHHCCCCCEECCCCCCCCEEEECCCCCC TPRTIPGVTLWE CCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA