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The map label for this gene is 28198899

Identifier: 28198899

GI number: 28198899

Start: 1203700

End: 1204488

Strand: Reverse

Name: 28198899

Synonym: PD1001

Alternate gene names: NA

Gene position: 1204488-1203700 (Counterclockwise)

Preceding gene: 28198900

Following gene: 28198898

Centisome position: 47.8

GC content: 55.51

Gene sequence:

>789_bases
ATGAACAACAACAGCAACGAACCAGGAGCTGGTATGAATGCAATGACACCTTTCCAGTTTGAATCTCATGCCGTGCGCAC
CGTGGTCGATGATCACGGCGAAGTGTGGTTTGTCGGCACAGACGTTGCTACGGTATTAGGCTACGCCAATCCCCATAAAG
CGTTGGATGCCCACTGCAAGGGGTGTGCGAAACGCACACCCCTTCAGACACCAGGCGGGATTCAAGAAATCCGGATCATC
TCCGAGCCTGACATGCTCCGCTTGATTGTGAGCAGCAAACTCCCTGCCGCAGAGCGGTTCGAGCGTTGGGTGTTTGAGGA
AGTTCTGCCCACCCTGCGCAAGACAGGCACCTACTCCACACCAGGAGCACTGCCCACCTTGCCTGGGCCGACACAGGATC
GCGTTGCCGCACTCCTGTTAATCGGCCAATTCGTTTCCAAAGTGACTGGCGTAAAACCAGGAATTGCTGCCGCCGCGACA
TTGGCCTGTATCAAAAGCAATACGAATTTAACGACCGAAGAGATACGCCGCGCATTGCCTGCGTTGCAGGAACCGCTTTG
CCTGCTCAACGCCACGCAACTAGGCAAGCGGCTGCATTGCTCGGCCAAGGCGGTGAACCAATTATTAGCCTCCAGAGGCT
TTCAGTTCCGTAATGAACGCGACGAATGGGAATTAACCGAAGCCGGTCGCGTGTGGTGTGAAGCCATTCCGTACTCGCGC
AACGGGCACAGCAGTTATCAACTCTTGTGGAATCCAGACGTCATCGCGTGTCTGAGGGAGGCGGCATGA

Upstream 100 bases:

>100_bases
ATGGCATGGATGGAGGTGTTCTCAGAATAGAAAAAGCCCTCGGCCCACACATGGAACAGGCCGCCCAAAAGGTCATGGGC
AATGCAAGGAGACATATCCA

Downstream 100 bases:

>100_bases
ATTATTACGAACGCCACATTGGCGATTACGCCCGTGACACGGGGTACCTCTCGGTGCTCGAACATGGCATTTACTGCCTG
CTGTTAGATCGCTACTACGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MNNNSNEPGAGMNAMTPFQFESHAVRTVVDDHGEVWFVGTDVATVLGYANPHKALDAHCKGCAKRTPLQTPGGIQEIRII
SEPDMLRLIVSSKLPAAERFERWVFEEVLPTLRKTGTYSTPGALPTLPGPTQDRVAALLLIGQFVSKVTGVKPGIAAAAT
LACIKSNTNLTTEEIRRALPALQEPLCLLNATQLGKRLHCSAKAVNQLLASRGFQFRNERDEWELTEAGRVWCEAIPYSR
NGHSSYQLLWNPDVIACLREAA

Sequences:

>Translated_262_residues
MNNNSNEPGAGMNAMTPFQFESHAVRTVVDDHGEVWFVGTDVATVLGYANPHKALDAHCKGCAKRTPLQTPGGIQEIRII
SEPDMLRLIVSSKLPAAERFERWVFEEVLPTLRKTGTYSTPGALPTLPGPTQDRVAALLLIGQFVSKVTGVKPGIAAAAT
LACIKSNTNLTTEEIRRALPALQEPLCLLNATQLGKRLHCSAKAVNQLLASRGFQFRNERDEWELTEAGRVWCEAIPYSR
NGHSSYQLLWNPDVIACLREAA
>Mature_262_residues
MNNNSNEPGAGMNAMTPFQFESHAVRTVVDDHGEVWFVGTDVATVLGYANPHKALDAHCKGCAKRTPLQTPGGIQEIRII
SEPDMLRLIVSSKLPAAERFERWVFEEVLPTLRKTGTYSTPGALPTLPGPTQDRVAALLLIGQFVSKVTGVKPGIAAAAT
LACIKSNTNLTTEEIRRALPALQEPLCLLNATQLGKRLHCSAKAVNQLLASRGFQFRNERDEWELTEAGRVWCEAIPYSR
NGHSSYQLLWNPDVIACLREAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Bro-N domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003497
- InterPro:   IPR018876 [H]

Pfam domain/function: PF02498 Bro-N; PF10548 P22_AR_C [H]

EC number: NA

Molecular weight: Translated: 28686; Mature: 28686

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNNSNEPGAGMNAMTPFQFESHAVRTVVDDHGEVWFVGTDVATVLGYANPHKALDAHCK
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECHHHHHHCCCCCHHHHHHHHH
GCAKRTPLQTPGGIQEIRIISEPDMLRLIVSSKLPAAERFERWVFEEVLPTLRKTGTYST
HHHHCCCCCCCCCHHEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
PGALPTLPGPTQDRVAALLLIGQFVSKVTGVKPGIAAAATLACIKSNTNLTTEEIRRALP
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH
ALQEPLCLLNATQLGKRLHCSAKAVNQLLASRGFQFRNERDEWELTEAGRVWCEAIPYSR
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
NGHSSYQLLWNPDVIACLREAA
CCCCCEEEEECCHHHHHHHHCC
>Mature Secondary Structure
MNNNSNEPGAGMNAMTPFQFESHAVRTVVDDHGEVWFVGTDVATVLGYANPHKALDAHCK
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECHHHHHHCCCCCHHHHHHHHH
GCAKRTPLQTPGGIQEIRIISEPDMLRLIVSSKLPAAERFERWVFEEVLPTLRKTGTYST
HHHHCCCCCCCCCHHEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
PGALPTLPGPTQDRVAALLLIGQFVSKVTGVKPGIAAAATLACIKSNTNLTTEEIRRALP
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH
ALQEPLCLLNATQLGKRLHCSAKAVNQLLASRGFQFRNERDEWELTEAGRVWCEAIPYSR
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
NGHSSYQLLWNPDVIACLREAA
CCCCCEEEEECCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]