Click here to switch to the map view.

The map label for this gene is ygfA [C]

Identifier: 62185563

GI number: 62185563

Start: 1126133

End: 1126675

Strand: Direct

Name: ygfA [C]

Synonym: CAB964

Alternate gene names: 62185563

Gene position: 1126133-1126675 (Clockwise)

Preceding gene: 62185562

Following gene: 62185564

Centisome position: 98.41

GC content: 42.54

Gene sequence:

>543_bases
ATGGACACTTCCGTAACTACTGATAAGAAAAAACAACGAGAATTTTTTTCTTCACTACGACAATCTATACAAGAACCTCG
GTTATCACAAGCCTCTCAGGCCATAGCTTCTTTTGTTCGTCTTCTCCCCAAAAGCAGTTGTGTTCTTTCCTTTGTTCCTT
TTCGATCAGAAGTGAACATCAATTTGGCCAATCAGATTCTGATTGAACACTTCTCACTAGCACTACCTAAAATAGACAAT
CATGAACTGACGCCCGTCCAGGTGCCTTCGCTAAACGACCTTACAAAAATCGTGCACCCCCTGCGTCTCGCTGAGTTCGA
TTTACCCCATATCTCACCACAAGAGATCACCCATGTTCTTGTTCCTGCCTTAGCTTTTGATGAGGATAACTACCGCCTGG
GTTATGGCGGTGGTTGTTATGATCGTTGGTTAGCAAAATACCCCCACCTTATCTCCATAGGCGTAGGATTTAAAGAACAA
AAAACCGCTAGTCTTCCTAGAGAATCTCATGACATGCCCTTATCTCAAGTATTTTTAGCTTAA

Upstream 100 bases:

>100_bases
AGATAGATAAAGGTTATGGCACAGCAGTATTTTTCACATCTTCAGGAACGATAACTAAAAAAATCCCTTATCAAGATGGC
AAACCGTTAGTGAATTAGCT

Downstream 100 bases:

>100_bases
TATTTTTCTCAGAAAGGTCTTCATAAATATTTCCGAGTCATTTTTTACTTCTTTATTCCCTATACCTTTGTCTTCTCATT
GAAAAATCTGTGAATTGTCA

Product: formyltetrahydrofolate cycloligase

Products: ADP; phosphate; 5,10-methenyltetrahydrofolate

Alternate protein names: Formyltetrahydrofolate Cycloligase; Formyltetrahydrofolate Synthetase

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MDTSVTTDKKKQREFFSSLRQSIQEPRLSQASQAIASFVRLLPKSSCVLSFVPFRSEVNINLANQILIEHFSLALPKIDN
HELTPVQVPSLNDLTKIVHPLRLAEFDLPHISPQEITHVLVPALAFDEDNYRLGYGGGCYDRWLAKYPHLISIGVGFKEQ
KTASLPRESHDMPLSQVFLA

Sequences:

>Translated_180_residues
MDTSVTTDKKKQREFFSSLRQSIQEPRLSQASQAIASFVRLLPKSSCVLSFVPFRSEVNINLANQILIEHFSLALPKIDN
HELTPVQVPSLNDLTKIVHPLRLAEFDLPHISPQEITHVLVPALAFDEDNYRLGYGGGCYDRWLAKYPHLISIGVGFKEQ
KTASLPRESHDMPLSQVFLA
>Mature_180_residues
MDTSVTTDKKKQREFFSSLRQSIQEPRLSQASQAIASFVRLLPKSSCVLSFVPFRSEVNINLANQILIEHFSLALPKIDN
HELTPVQVPSLNDLTKIVHPLRLAEFDLPHISPQEITHVLVPALAFDEDNYRLGYGGGCYDRWLAKYPHLISIGVGFKEQ
KTASLPRESHDMPLSQVFLA

Specific function: Unknown

COG id: COG0212

COG function: function code H; 5-formyltetrahydrofolate cyclo-ligase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 6.3.3.2

Molecular weight: Translated: 20309; Mature: 20309

Theoretical pI: Translated: 7.21; Mature: 7.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTSVTTDKKKQREFFSSLRQSIQEPRLSQASQAIASFVRLLPKSSCVLSFVPFRSEVNI
CCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC
NLANQILIEHFSLALPKIDNHELTPVQVPSLNDLTKIVHPLRLAEFDLPHISPQEITHVL
HHHHHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
VPALAFDEDNYRLGYGGGCYDRWLAKYPHLISIGVGFKEQKTASLPRESHDMPLSQVFLA
HHHHHCCCCCEEEECCCCHHHHHHHHCCCEEEECCCCCCHHHHCCCCCCCCCCHHHHHCC
>Mature Secondary Structure
MDTSVTTDKKKQREFFSSLRQSIQEPRLSQASQAIASFVRLLPKSSCVLSFVPFRSEVNI
CCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC
NLANQILIEHFSLALPKIDNHELTPVQVPSLNDLTKIVHPLRLAEFDLPHISPQEITHVL
HHHHHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
VPALAFDEDNYRLGYGGGCYDRWLAKYPHLISIGVGFKEQKTASLPRESHDMPLSQVFLA
HHHHHCCCCCEEEECCCCHHHHHHHHCCCEEEECCCCCCHHHHCCCCCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; 5-formyltetrahydrofolate

Specific reaction: ATP + 5-formyltetrahydrofolate = ADP + phosphate + 5,10-methenyltetrahydrofolate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA