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The map label for this gene is 62185521

Identifier: 62185521

GI number: 62185521

Start: 1075699

End: 1076382

Strand: Direct

Name: 62185521

Synonym: CAB921

Alternate gene names: NA

Gene position: 1075699-1076382 (Clockwise)

Preceding gene: 62185509

Following gene: 62185522

Centisome position: 94.0

GC content: 40.06

Gene sequence:

>684_bases
ATGAGCAAGCCTACTTCAAATAATTCTAAAAAGCCATCAGCCTCGTTTAATAAAAAAACACGTAGCCGACTCGCTGAGCT
TGCTGCACAAAAAAAAGCTAAGGCTAATGATTTAGAACAGAAATATCCTGTCCCTACAGAAGAAGAAACAAAACAAGCGT
TAACAGGGATTTTACAGGGACTTGATGCCGGATTAACTCTCCAACAAATCCTAGGGCTATCCGACGTTTTATTAGAAGAG
ATCTATACCATAGCCTACAGCTTTTATTCCCAAGGGAAATACAATGAAGCCATTGGCCTTTTCCAGATCCTTACAGCCTC
AAAGCCCCAGTGCTACAAGTATATCCTAGGCTTAAGCTCATGTTACCATCAACTCAAAATGTACAATGAAGCGGCCTTTG
GCTTCTTCCTTGCTTTTGATGCGGAGCCCAATAACCCGATCCCTCCCTATTACATAGCTGACAGCTTGATGAAGATCGAT
CAAACCGAAGAATCGAAAGATTTCTTAGACATCACTATTGATATCTGCGCTAACAAACCCGAGTACAGAATTTTAAAAGA
ACGCTGCAACATCATGAAAGATTCTCTTAAAGGGAAGAGCGCAGACACAACTCCAAAAAAGAAAAAAACTACCTCTGCTA
AATCAAAAACACCGGCCAAAAAAAACTCCGGAAAAAAAAATTAA

Upstream 100 bases:

>100_bases
AGACTTTAAATTATATCTAATTAATAACTTGTCTTTTCAAAAAAATTAATTTTAAAATTGATTTATGAATTAAATAATTT
TAATTTTAGGAATTATATTA

Downstream 100 bases:

>100_bases
CCTAGGGTTAGGAGAACTCCAATATGAATAAAAAAGTCAGAAAAACAAAAAAAACTACGACTACAGCGAAGAAGACGTCT
ACCCAACACACTCCCACCTC

Product: putative regulatory protein

Products: NA

Alternate protein names: Type III Secretion Chaperone SycD; Low Calcium Response Protein H; LcrH/SycD Chaperone Family Protein; Type III Secretion Chaperone Low Calcium Response Protein H; Type III Secretion Chaperone SycD/LcrH

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MSKPTSNNSKKPSASFNKKTRSRLAELAAQKKAKANDLEQKYPVPTEEETKQALTGILQGLDAGLTLQQILGLSDVLLEE
IYTIAYSFYSQGKYNEAIGLFQILTASKPQCYKYILGLSSCYHQLKMYNEAAFGFFLAFDAEPNNPIPPYYIADSLMKID
QTEESKDFLDITIDICANKPEYRILKERCNIMKDSLKGKSADTTPKKKKTTSAKSKTPAKKNSGKKN

Sequences:

>Translated_227_residues
MSKPTSNNSKKPSASFNKKTRSRLAELAAQKKAKANDLEQKYPVPTEEETKQALTGILQGLDAGLTLQQILGLSDVLLEE
IYTIAYSFYSQGKYNEAIGLFQILTASKPQCYKYILGLSSCYHQLKMYNEAAFGFFLAFDAEPNNPIPPYYIADSLMKID
QTEESKDFLDITIDICANKPEYRILKERCNIMKDSLKGKSADTTPKKKKTTSAKSKTPAKKNSGKKN
>Mature_226_residues
SKPTSNNSKKPSASFNKKTRSRLAELAAQKKAKANDLEQKYPVPTEEETKQALTGILQGLDAGLTLQQILGLSDVLLEEI
YTIAYSFYSQGKYNEAIGLFQILTASKPQCYKYILGLSSCYHQLKMYNEAAFGFFLAFDAEPNNPIPPYYIADSLMKIDQ
TEESKDFLDITIDICANKPEYRILKERCNIMKDSLKGKSADTTPKKKKTTSAKSKTPAKKNSGKKN

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25392; Mature: 25261

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKPTSNNSKKPSASFNKKTRSRLAELAAQKKAKANDLEQKYPVPTEEETKQALTGILQG
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
LDAGLTLQQILGLSDVLLEEIYTIAYSFYSQGKYNEAIGLFQILTASKPQCYKYILGLSS
HCCCCHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
CYHQLKMYNEAAFGFFLAFDAEPNNPIPPYYIADSLMKIDQTEESKDFLDITIDICANKP
HHHHHHHHHHHHEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCC
EYRILKERCNIMKDSLKGKSADTTPKKKKTTSAKSKTPAKKNSGKKN
HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SKPTSNNSKKPSASFNKKTRSRLAELAAQKKAKANDLEQKYPVPTEEETKQALTGILQG
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
LDAGLTLQQILGLSDVLLEEIYTIAYSFYSQGKYNEAIGLFQILTASKPQCYKYILGLSS
HCCCCHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
CYHQLKMYNEAAFGFFLAFDAEPNNPIPPYYIADSLMKIDQTEESKDFLDITIDICANKP
HHHHHHHHHHHHEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCC
EYRILKERCNIMKDSLKGKSADTTPKKKKTTSAKSKTPAKKNSGKKN
HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA