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The map label for this gene is 62185459

Identifier: 62185459

GI number: 62185459

Start: 1000985

End: 1001647

Strand: Direct

Name: 62185459

Synonym: CAB857

Alternate gene names: NA

Gene position: 1000985-1001647 (Clockwise)

Preceding gene: 62185458

Following gene: 62185463

Centisome position: 87.47

GC content: 41.03

Gene sequence:

>663_bases
ATGAAATTAGAAGATACTTCACACCCGACCCTATACATTTCTCTAGATCATCACTGGGAAAAGAGCACGTGCTACAGTAT
GGATAGAGCTTCGCAGTTACTGAATTTCAAATTTCTTCCCTTTCTTACTTTTGCAGATTGGAAAGTAGAAGAAAAAGTCC
GTCAGCTCTGCCATAAGGCTAAGAAAAAACAATTCATTTCTCCTTTAGCAAAATGGTTGGGACAGCTTCACAAGCAAGAT
CTAATCACGCCTCCTATGCCTCCCATAGCCATTTGTTGGATCAACTCCTATATAGGTTACGGAGTCTTTGCTCGAGAAAG
GATCCCGGCTTGGACATACATTGGAGAGTATACGGGGATATTACGTCGCCGTCAGGTCATTTGGTTGGATGAAAACGATT
ACTGTTTTCGTTATCCCTTATCCTTGTGGCTATGGCGTTATTTTACTATCGATAGTGGACATCAAGGAAATTTCACTCGC
TTTATTAATCATAGTGACAAGCCTAACGTAGAAGCTATTGGAGTATTCCAGGACGGACTATTTCATGTGATTATTAGAAC
GATTCAAGCAATTGAAGCGGGCGAAGAGTTATGTTACCACTATGGCCCGCTATATTGGAAGCATAGGAAAAAGCGTGAAG
AGTTTATTCCCGAAGAAGAGTAA

Upstream 100 bases:

>100_bases
CGGTATCTTCGGCCATAGAAAATATTACTTCCATTGATCCTGTCATTGTAGAAAGTCATGAAGTGACTGATCCTATTTAC
TTTAGTTCTTTAATTACCGT

Downstream 100 bases:

>100_bases
GTATTTAACTCTTTTCGTATGTTCCCATGAGCTCTGCGGTATCTATAACATGACTTTCCATGACTTCAAGCAGCTGATCT
CTGGTGACATTTTCCTCTAT

Product: hypothetical protein

Products: NA

Alternate protein names: Nuclear Protein SET; SET Domain Protein; SET Domain Containing Protein

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MKLEDTSHPTLYISLDHHWEKSTCYSMDRASQLLNFKFLPFLTFADWKVEEKVRQLCHKAKKKQFISPLAKWLGQLHKQD
LITPPMPPIAICWINSYIGYGVFARERIPAWTYIGEYTGILRRRQVIWLDENDYCFRYPLSLWLWRYFTIDSGHQGNFTR
FINHSDKPNVEAIGVFQDGLFHVIIRTIQAIEAGEELCYHYGPLYWKHRKKREEFIPEEE

Sequences:

>Translated_220_residues
MKLEDTSHPTLYISLDHHWEKSTCYSMDRASQLLNFKFLPFLTFADWKVEEKVRQLCHKAKKKQFISPLAKWLGQLHKQD
LITPPMPPIAICWINSYIGYGVFARERIPAWTYIGEYTGILRRRQVIWLDENDYCFRYPLSLWLWRYFTIDSGHQGNFTR
FINHSDKPNVEAIGVFQDGLFHVIIRTIQAIEAGEELCYHYGPLYWKHRKKREEFIPEEE
>Mature_220_residues
MKLEDTSHPTLYISLDHHWEKSTCYSMDRASQLLNFKFLPFLTFADWKVEEKVRQLCHKAKKKQFISPLAKWLGQLHKQD
LITPPMPPIAICWINSYIGYGVFARERIPAWTYIGEYTGILRRRQVIWLDENDYCFRYPLSLWLWRYFTIDSGHQGNFTR
FINHSDKPNVEAIGVFQDGLFHVIIRTIQAIEAGEELCYHYGPLYWKHRKKREEFIPEEE

Specific function: Unknown

COG id: COG2940

COG function: function code R; Proteins containing SET domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI71988186, Length=145, Percent_Identity=35.1724137931034, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI18543183, Length=124, Percent_Identity=36.2903225806452, Blast_Score=69, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26347; Mature: 26347

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: PS50280 SET

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLEDTSHPTLYISLDHHWEKSTCYSMDRASQLLNFKFLPFLTFADWKVEEKVRQLCHKA
CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCEEHHHHEEECCCCHHHHHHHHHHHH
KKKQFISPLAKWLGQLHKQDLITPPMPPIAICWINSYIGYGVFARERIPAWTYIGEYTGI
HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHEEHHHHHHCCHHHHCCCCHHHHHHHHHHH
LRRRQVIWLDENDYCFRYPLSLWLWRYFTIDSGHQGNFTRFINHSDKPNVEAIGVFQDGL
HHHCEEEEECCCCCEEECCHHHHHHHHHEECCCCCCCEEEECCCCCCCCCEEEEEHHHHH
FHVIIRTIQAIEAGEELCYHYGPLYWKHRKKREEFIPEEE
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKLEDTSHPTLYISLDHHWEKSTCYSMDRASQLLNFKFLPFLTFADWKVEEKVRQLCHKA
CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCEEHHHHEEECCCCHHHHHHHHHHHH
KKKQFISPLAKWLGQLHKQDLITPPMPPIAICWINSYIGYGVFARERIPAWTYIGEYTGI
HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHEEHHHHHHCCHHHHCCCCHHHHHHHHHHH
LRRRQVIWLDENDYCFRYPLSLWLWRYFTIDSGHQGNFTRFINHSDKPNVEAIGVFQDGL
HHHCEEEEECCCCCEEECCHHHHHHHHHEECCCCCCCEEEECCCCCCCCCEEEEEHHHHH
FHVIIRTIQAIEAGEELCYHYGPLYWKHRKKREEFIPEEE
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA