| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is 62185339
Identifier: 62185339
GI number: 62185339
Start: 838319
End: 839026
Strand: Direct
Name: 62185339
Synonym: CAB726
Alternate gene names: NA
Gene position: 838319-839026 (Clockwise)
Preceding gene: 62185338
Following gene: 62185342
Centisome position: 73.26
GC content: 38.98
Gene sequence:
>708_bases ATGAGGGTTATCTTTCCAGATAAACATAATAAAAACCCGTTTCTCACTCAGGTACTTAGACAGCTTCCTTCATTTATCTT AATAACCTCGTGTATATCTCCCCTACTTTCATACCTGATGAAAAGGTTATTCGGTATTCCAGGGATCATCGAAACTCTAG CCCTATCCAGAGCAGGAATTCATAAACACAATTTTTGGCAGTTTATTACCTATCCCCTCATTACAGCTGACTCCCTATGC ATCCATAAAGAAGGCTGCATGGACATCACACAACGTCTACTCGTGAGAAATGTATTAGGCTTCACCTTTTTCTATAAAAC AACTAACCACATTATTCGAAAACTAGGATCGATAACTTTTCTTATTCTTGTGACTAGCCAAATCCTAATAACAGGAGTAG TGGTGTGGGCATGTCTCAAATTATTTCATAGTTCGCAAGCCCTATTCGGACCAGAATGTTTAATTAGCACGCTTATGCTC ATTTGGGTTTTCCTAGATCCAGAAAAACGCCTTGGCCTTCACCCCTTCCCAATAACCATATCACGTAAATGGGGATTTGT CGTTTTGGCAGCCTTTTACTTCCTGATTCTACTATTTTCTGGAGCCTTTGCATTATTCTTCGGATCCATACTCTCATTAA TCCTGGGCGTTCTGTTTTGCTATAAAGAAAAAATTCCTAACCCTTACAGAATATCCCGAATCTTTTAA
Upstream 100 bases:
>100_bases CGACATCTCCGTCTGATTAATTATTTAATGACTTCTAATAAAACAATCCATAATCTAGTATAAGGCATTACTAAAAAGAA AAGAATCAGGTCAAACCTCT
Downstream 100 bases:
>100_bases GCTTCATCGGCAAATAAAGCTAAAATTGCTGCTCTAGCCTCACCTAATCCGGAAAGCACCCCCTCTTCAAAACGGAACAA AGGGTTTTCTTCCAATAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MRVIFPDKHNKNPFLTQVLRQLPSFILITSCISPLLSYLMKRLFGIPGIIETLALSRAGIHKHNFWQFITYPLITADSLC IHKEGCMDITQRLLVRNVLGFTFFYKTTNHIIRKLGSITFLILVTSQILITGVVVWACLKLFHSSQALFGPECLISTLML IWVFLDPEKRLGLHPFPITISRKWGFVVLAAFYFLILLFSGAFALFFGSILSLILGVLFCYKEKIPNPYRISRIF
Sequences:
>Translated_235_residues MRVIFPDKHNKNPFLTQVLRQLPSFILITSCISPLLSYLMKRLFGIPGIIETLALSRAGIHKHNFWQFITYPLITADSLC IHKEGCMDITQRLLVRNVLGFTFFYKTTNHIIRKLGSITFLILVTSQILITGVVVWACLKLFHSSQALFGPECLISTLML IWVFLDPEKRLGLHPFPITISRKWGFVVLAAFYFLILLFSGAFALFFGSILSLILGVLFCYKEKIPNPYRISRIF >Mature_235_residues MRVIFPDKHNKNPFLTQVLRQLPSFILITSCISPLLSYLMKRLFGIPGIIETLALSRAGIHKHNFWQFITYPLITADSLC IHKEGCMDITQRLLVRNVLGFTFFYKTTNHIIRKLGSITFLILVTSQILITGVVVWACLKLFHSSQALFGPECLISTLML IWVFLDPEKRLGLHPFPITISRKWGFVVLAAFYFLILLFSGAFALFFGSILSLILGVLFCYKEKIPNPYRISRIF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26947; Mature: 26947
Theoretical pI: Translated: 10.35; Mature: 10.35
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVIFPDKHNKNPFLTQVLRQLPSFILITSCISPLLSYLMKRLFGIPGIIETLALSRAGI CEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC HKHNFWQFITYPLITADSLCIHKEGCMDITQRLLVRNVLGFTFFYKTTNHIIRKLGSITF CHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LILVTSQILITGVVVWACLKLFHSSQALFGPECLISTLMLIWVFLDPEKRLGLHPFPITI HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCEEE SRKWGFVVLAAFYFLILLFSGAFALFFGSILSLILGVLFCYKEKIPNPYRISRIF ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCC >Mature Secondary Structure MRVIFPDKHNKNPFLTQVLRQLPSFILITSCISPLLSYLMKRLFGIPGIIETLALSRAGI CEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC HKHNFWQFITYPLITADSLCIHKEGCMDITQRLLVRNVLGFTFFYKTTNHIIRKLGSITF CHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LILVTSQILITGVVVWACLKLFHSSQALFGPECLISTLMLIWVFLDPEKRLGLHPFPITI HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCEEE SRKWGFVVLAAFYFLILLFSGAFALFFGSILSLILGVLFCYKEKIPNPYRISRIF ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA