| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is aroM [H]
Identifier: 62185304
GI number: 62185304
Start: 801682
End: 802203
Strand: Direct
Name: aroM [H]
Synonym: CAB691
Alternate gene names: 62185304
Gene position: 801682-802203 (Clockwise)
Preceding gene: 62185303
Following gene: 62185305
Centisome position: 70.05
GC content: 40.8
Gene sequence:
>522_bases ATGAACATATTTCTCTGCGGCCTGCCGACAGTAGGCAAGACGTTGTTTGGCAAGGCTCTCGCTAAATATCTTTCGGTGCC TTTCTTTGATGTCGATGATTTAATCGTAAGTAACTACGGCAATAAGCTATATCCCTCGGCCTGCGAAATATTCCAGGCTA TTGGAGAACAAGAGTTTACAAAATTAGAAATTGCAGCTCTCCGTTCTCCCTGCCTAGATCATAGTGTTACAGCTTTAGGT GGAGGCACTATCATGCATCAAGAAGCATGTGATATAATTAAACATCGAGGAACGCTAGTTTATCTATCCCTGCCTATGGC TCAGATTCGTGAAAGACTCTTAAAACGTGGTCTCCCTGAAAGATTAAAACGCGCTCCAAATATGGAAGAAATCTTACAAC AACGTATAGAGCGTATGCAACGCATCTGTGACTATCACTTCCCTCTTGATGAGGTAAATCTTTTAGATGAACGTTCATTA TTCTCTGCGTGTGAATCTTTTACTACTTTACTAAATCAATGA
Upstream 100 bases:
>100_bases TCTGGGGATAGCATTATCTATGATACCGATTGCGTAAAAAAAACTTTCCCGAATTTCATCCAGATTCTAAATTCCTTGCA TACGAATATCCAGGAACATT
Downstream 100 bases:
>100_bases GAAATCGCTTTGGTTCTTTATTTTCTCTAACGACATGGGGAGAATCTCATGGACCTTGTCTTGGGGTTGTTATCGACGGG TGCCCTGCAGGGCTACAACT
Product: shikimate kinase
Products: NA
Alternate protein names: SK [H]
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MNIFLCGLPTVGKTLFGKALAKYLSVPFFDVDDLIVSNYGNKLYPSACEIFQAIGEQEFTKLEIAALRSPCLDHSVTALG GGTIMHQEACDIIKHRGTLVYLSLPMAQIRERLLKRGLPERLKRAPNMEEILQQRIERMQRICDYHFPLDEVNLLDERSL FSACESFTTLLNQ
Sequences:
>Translated_173_residues MNIFLCGLPTVGKTLFGKALAKYLSVPFFDVDDLIVSNYGNKLYPSACEIFQAIGEQEFTKLEIAALRSPCLDHSVTALG GGTIMHQEACDIIKHRGTLVYLSLPMAQIRERLLKRGLPERLKRAPNMEEILQQRIERMQRICDYHFPLDEVNLLDERSL FSACESFTTLLNQ >Mature_173_residues MNIFLCGLPTVGKTLFGKALAKYLSVPFFDVDDLIVSNYGNKLYPSACEIFQAIGEQEFTKLEIAALRSPCLDHSVTALG GGTIMHQEACDIIKHRGTLVYLSLPMAQIRERLLKRGLPERLKRAPNMEEILQQRIERMQRICDYHFPLDEVNLLDERSL FSACESFTTLLNQ
Specific function: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate [H]
COG id: COG0703
COG function: function code E; Shikimate kinase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate kinase family [H]
Homologues:
None
Paralogues:
None
Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000623 [H]
Pfam domain/function: PF01202 SKI [H]
EC number: =2.7.1.71 [H]
Molecular weight: Translated: 19637; Mature: 19637
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIFLCGLPTVGKTLFGKALAKYLSVPFFDVDDLIVSNYGNKLYPSACEIFQAIGEQEFT CCEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCHHHHH KLEIAALRSPCLDHSVTALGGGTIMHQEACDIIKHRGTLVYLSLPMAQIRERLLKRGLPE HHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCHH RLKRAPNMEEILQQRIERMQRICDYHFPLDEVNLLDERSLFSACESFTTLLNQ HHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNIFLCGLPTVGKTLFGKALAKYLSVPFFDVDDLIVSNYGNKLYPSACEIFQAIGEQEFT CCEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCHHHHH KLEIAALRSPCLDHSVTALGGGTIMHQEACDIIKHRGTLVYLSLPMAQIRERLLKRGLPE HHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCHH RLKRAPNMEEILQQRIERMQRICDYHFPLDEVNLLDERSLFSACESFTTLLNQ HHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362 [H]