| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is 62185286
Identifier: 62185286
GI number: 62185286
Start: 782200
End: 783669
Strand: Direct
Name: 62185286
Synonym: CAB673
Alternate gene names: NA
Gene position: 782200-783669 (Clockwise)
Preceding gene: 62185284
Following gene: 62185294
Centisome position: 68.35
GC content: 42.52
Gene sequence:
>1470_bases ATGTTATCTTTAAGTTCAGTCTGTAATACATCACAATCGCAGACAACAGTTTCACAGCAAAATCAAAATAATTTAGATCC TAGCGCGCAAAAAGTTATTAAATTATCTCGCCGGCTCGAGGGCTTTTTAGAAAAGCATGCGCCTCCACCAAGCACAGGCT ATTTAACGCATCCTACAAGCTCCTCACGTGTTCGAAGTAGTGCTGATAATTTTTATCTTGACGTAGAGGAATACTCTCAA ATCCACGGTACCGCTTGTGCAGCTCTTTCTTTGTTAAAATCGGATGTGCGTGCCGCTGTAAAACGTTGCCTCCCCATAAT ACCAGGAGCAACAAAACAAAAAATGCAACGATTCTGCCCTACTTCAATAGAAGAGTCAGATAGACAAGCTTCTCGTGTTA GCAAAAGAACAAAAGACATGCTATTTATAGCGGAGAAGGTTCGCCTATACAATATTTTTGAAGATAGGTGTGGAGTAATT TTAGACCTTTGGCATGTAGCTCCGACAGATACAAACCCTAAGGATGCTCAAAAAATTTGGATAAAAACCCCAGACGGCCA TAAATCTCCATTTTGCTATGCAAAATGTTTGAATTACGCTAGAACAATCCGTTGTTACAGAACAAGCGACCCAAGTAAAG GAAGCTTTTTGCTCGACGAAAATCAAGCTAGCGTTCTTGCTTTAAGTGTAGCATATACCCTGGGAGCGACACTCAAACAT CGCCGTTTCAGAGATATTGATATTCTAATTGAAAAAGAGACTTTGAATAATGGTGAGGAAATCTACGTAACGGATAGTGT ATTATTACAAATCATTATCCTTATTTCCTTGGTCGCGAGGGATATGCACCCCTATACTAAAGACGTAAAACCAGAAGCTA TCTTTTCAGAAGACGAAAGGAACGTCATTATACTTACATCGAATATCTTCCGAGAACAAGTCTTAGGGAAAATAACATTA AACAAAGACGGGGACGGAGTTTCAGAAACCAAACCCATAGAATTCCCTAGAATCAGCAAAAACAGCGATCCATGGCGTCG ACCAAGGGTAGATCAACTAAGTTCATCTACTATTCAAGAAGAAAACTTCGATGCTTCTGTAAGAGAACAAGAGGAAGGGA TATCACCCTATACAGCTGCAAAGCTACTCGCCATATCTTCGGCTATTCTAAACCCCTCTCCCTTAAAAGAAGCTCCGCCA CGAACTCCGACAGCAGGCTTCTCCCCAGACTTCTTATCACCTTCCCCTTATGACGGTGAAAATAGCCGCACACTTGACGT GAACTCCGCTCCCTTAACAGATGCTCCCCCATTAACTCCCTCGCCAGGCGCCTCTCCACAACACTTATCTCCGCATGACG GTGAAAATAGCTATACATTTGGCATGACCTCCTCCCCCCTACCAGATGCTCCGCCATTAACTCCTTCGCCAACTCTTCGA CAAGAAAGTATTCACCGATGGTATCCGTAA
Upstream 100 bases:
>100_bases ATAGTCCAGAACATTTTTAAAAATTAACTATAAAAGCATTTTTATATAATTAAGAGACATTTTTAGGTGTCCTATTGGGT TTTCTTTGGGAGTAGTCTAT
Downstream 100 bases:
>100_bases TATTTACGCCGAGAGAAACTGCAGATTGTCTATTAGAAAGCTAGAGGACAGATTTACCTAACGACCTTTTTCTCTAATTG CATATTCTGTGGGTAGTGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 489; Mature: 489
Protein sequence:
>489_residues MLSLSSVCNTSQSQTTVSQQNQNNLDPSAQKVIKLSRRLEGFLEKHAPPPSTGYLTHPTSSSRVRSSADNFYLDVEEYSQ IHGTACAALSLLKSDVRAAVKRCLPIIPGATKQKMQRFCPTSIEESDRQASRVSKRTKDMLFIAEKVRLYNIFEDRCGVI LDLWHVAPTDTNPKDAQKIWIKTPDGHKSPFCYAKCLNYARTIRCYRTSDPSKGSFLLDENQASVLALSVAYTLGATLKH RRFRDIDILIEKETLNNGEEIYVTDSVLLQIIILISLVARDMHPYTKDVKPEAIFSEDERNVIILTSNIFREQVLGKITL NKDGDGVSETKPIEFPRISKNSDPWRRPRVDQLSSSTIQEENFDASVREQEEGISPYTAAKLLAISSAILNPSPLKEAPP RTPTAGFSPDFLSPSPYDGENSRTLDVNSAPLTDAPPLTPSPGASPQHLSPHDGENSYTFGMTSSPLPDAPPLTPSPTLR QESIHRWYP
Sequences:
>Translated_489_residues MLSLSSVCNTSQSQTTVSQQNQNNLDPSAQKVIKLSRRLEGFLEKHAPPPSTGYLTHPTSSSRVRSSADNFYLDVEEYSQ IHGTACAALSLLKSDVRAAVKRCLPIIPGATKQKMQRFCPTSIEESDRQASRVSKRTKDMLFIAEKVRLYNIFEDRCGVI LDLWHVAPTDTNPKDAQKIWIKTPDGHKSPFCYAKCLNYARTIRCYRTSDPSKGSFLLDENQASVLALSVAYTLGATLKH RRFRDIDILIEKETLNNGEEIYVTDSVLLQIIILISLVARDMHPYTKDVKPEAIFSEDERNVIILTSNIFREQVLGKITL NKDGDGVSETKPIEFPRISKNSDPWRRPRVDQLSSSTIQEENFDASVREQEEGISPYTAAKLLAISSAILNPSPLKEAPP RTPTAGFSPDFLSPSPYDGENSRTLDVNSAPLTDAPPLTPSPGASPQHLSPHDGENSYTFGMTSSPLPDAPPLTPSPTLR QESIHRWYP >Mature_489_residues MLSLSSVCNTSQSQTTVSQQNQNNLDPSAQKVIKLSRRLEGFLEKHAPPPSTGYLTHPTSSSRVRSSADNFYLDVEEYSQ IHGTACAALSLLKSDVRAAVKRCLPIIPGATKQKMQRFCPTSIEESDRQASRVSKRTKDMLFIAEKVRLYNIFEDRCGVI LDLWHVAPTDTNPKDAQKIWIKTPDGHKSPFCYAKCLNYARTIRCYRTSDPSKGSFLLDENQASVLALSVAYTLGATLKH RRFRDIDILIEKETLNNGEEIYVTDSVLLQIIILISLVARDMHPYTKDVKPEAIFSEDERNVIILTSNIFREQVLGKITL NKDGDGVSETKPIEFPRISKNSDPWRRPRVDQLSSSTIQEENFDASVREQEEGISPYTAAKLLAISSAILNPSPLKEAPP RTPTAGFSPDFLSPSPYDGENSRTLDVNSAPLTDAPPLTPSPGASPQHLSPHDGENSYTFGMTSSPLPDAPPLTPSPTLR QESIHRWYP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54398; Mature: 54398
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSLSSVCNTSQSQTTVSQQNQNNLDPSAQKVIKLSRRLEGFLEKHAPPPSTGYLTHPTS CCCHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCC SSRVRSSADNFYLDVEEYSQIHGTACAALSLLKSDVRAAVKRCLPIIPGATKQKMQRFCP HHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC TSIEESDRQASRVSKRTKDMLFIAEKVRLYNIFEDRCGVILDLWHVAPTDTNPKDAQKIW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCEEE IKTPDGHKSPFCYAKCLNYARTIRCYRTSDPSKGSFLLDENQASVLALSVAYTLGATLKH EECCCCCCCCHHHHHHHHHHHHEEEEECCCCCCCCEEEECCCCEEEEEHHHHHHHHHHHH RRFRDIDILIEKETLNNGEEIYVTDSVLLQIIILISLVARDMHPYTKDVKPEAIFSEDER CCCCCEEEEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCC NVIILTSNIFREQVLGKITLNKDGDGVSETKPIEFPRISKNSDPWRRPRVDQLSSSTIQE CEEEEEHHHHHHHHHCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH ENFDASVREQEEGISPYTAAKLLAISSAILNPSPLKEAPPRTPTAGFSPDFLSPSPYDGE CCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC NSRTLDVNSAPLTDAPPLTPSPGASPQHLSPHDGENSYTFGMTSSPLPDAPPLTPSPTLR CCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHH QESIHRWYP HHHHHCCCC >Mature Secondary Structure MLSLSSVCNTSQSQTTVSQQNQNNLDPSAQKVIKLSRRLEGFLEKHAPPPSTGYLTHPTS CCCHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCC SSRVRSSADNFYLDVEEYSQIHGTACAALSLLKSDVRAAVKRCLPIIPGATKQKMQRFCP HHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC TSIEESDRQASRVSKRTKDMLFIAEKVRLYNIFEDRCGVILDLWHVAPTDTNPKDAQKIW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCEEE IKTPDGHKSPFCYAKCLNYARTIRCYRTSDPSKGSFLLDENQASVLALSVAYTLGATLKH EECCCCCCCCHHHHHHHHHHHHEEEEECCCCCCCCEEEECCCCEEEEEHHHHHHHHHHHH RRFRDIDILIEKETLNNGEEIYVTDSVLLQIIILISLVARDMHPYTKDVKPEAIFSEDER CCCCCEEEEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCC NVIILTSNIFREQVLGKITLNKDGDGVSETKPIEFPRISKNSDPWRRPRVDQLSSSTIQE CEEEEEHHHHHHHHHCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH ENFDASVREQEEGISPYTAAKLLAISSAILNPSPLKEAPPRTPTAGFSPDFLSPSPYDGE CCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC NSRTLDVNSAPLTDAPPLTPSPGASPQHLSPHDGENSYTFGMTSSPLPDAPPLTPSPTLR CCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHH QESIHRWYP HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA