| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is 62185250
Identifier: 62185250
GI number: 62185250
Start: 732866
End: 733648
Strand: Direct
Name: 62185250
Synonym: CAB637
Alternate gene names: NA
Gene position: 732866-733648 (Clockwise)
Preceding gene: 62185248
Following gene: 62185251
Centisome position: 64.04
GC content: 39.72
Gene sequence:
>783_bases ATGACGTTAAGCAACGACAGTAGAGTTTACCCATTGGAGGTCGTCATGAAAGTGAAAATTAATGACCAATTGATTTGCAT CCCTCCCTATATTTCCGCACGATGGAATCAAATCGCTTTTATCGAATCACAAGAAGGAGAAGTTCAAGGTCGGCCTACCC TTAAGCTGCATTTAATTGACGGAAAAACCATTTCTATCCCTAACTTAGATCAGGCGATTATCGACATTGCTTTCCAAGAG CATCTTCTCCACTTAGAATCTTCCCAAACAATGCGCGATGAATCTAGCCGTGAAGACGACAAACTGGGGATATTAATCAA TACCCTACAACAGTTATCCAAGGATACCGATGTGCAGATATTTGCACATAAAAGTCTCATATCTCCTCTATTTTCTGGAA CGAGTCCAATGGAAATGATCTTACAACATACTCCAGAACATAAGGATCATCCGGACGCTCCTGCCGATATTTTAGAAAAA ATGGTTACGGTAATCCGTTCATTAGTAGGAAATAATCAAAACCTTTTTCCTAAAGCAGAGCCTCATTGTAATTGCATGCA CTGTCAGATTGCTAGAGTTCTTAGTGAAGAAGAAGAAGCTACTGTATCCGAACAAGATTTATCTTTTCGCACATGGGATA TCAGTCCGACAGGGAACAAACTGTATCTTGTTACCAATCCCTTAAATCCGAATGAGCAATTTAGTGTATACTTAGGCACA CCTATTGGATGTACGTGTGGGCAGGTAAATTGTGAACATATCAAAGCTGTTCTCTATACTTAA
Upstream 100 bases:
>100_bases AAGAAAAAACTGCCCACATCTTTAGGAAGTTAGGTCATGAATTAGCAATCAATAACACAAATTGCTAATTCGATTGTAAA AAAAACACAGCTTCCCTACA
Downstream 100 bases:
>100_bases AGTTCTACCTAATCTCGTTTGGTAAGATAATTGACTTTTTCACTGCAGTCGATATAATTCTTTTTTCTAGGGACTACTTC CCCTAAAGGACTAGGTCACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MTLSNDSRVYPLEVVMKVKINDQLICIPPYISARWNQIAFIESQEGEVQGRPTLKLHLIDGKTISIPNLDQAIIDIAFQE HLLHLESSQTMRDESSREDDKLGILINTLQQLSKDTDVQIFAHKSLISPLFSGTSPMEMILQHTPEHKDHPDAPADILEK MVTVIRSLVGNNQNLFPKAEPHCNCMHCQIARVLSEEEEATVSEQDLSFRTWDISPTGNKLYLVTNPLNPNEQFSVYLGT PIGCTCGQVNCEHIKAVLYT
Sequences:
>Translated_260_residues MTLSNDSRVYPLEVVMKVKINDQLICIPPYISARWNQIAFIESQEGEVQGRPTLKLHLIDGKTISIPNLDQAIIDIAFQE HLLHLESSQTMRDESSREDDKLGILINTLQQLSKDTDVQIFAHKSLISPLFSGTSPMEMILQHTPEHKDHPDAPADILEK MVTVIRSLVGNNQNLFPKAEPHCNCMHCQIARVLSEEEEATVSEQDLSFRTWDISPTGNKLYLVTNPLNPNEQFSVYLGT PIGCTCGQVNCEHIKAVLYT >Mature_259_residues TLSNDSRVYPLEVVMKVKINDQLICIPPYISARWNQIAFIESQEGEVQGRPTLKLHLIDGKTISIPNLDQAIIDIAFQEH LLHLESSQTMRDESSREDDKLGILINTLQQLSKDTDVQIFAHKSLISPLFSGTSPMEMILQHTPEHKDHPDAPADILEKM VTVIRSLVGNNQNLFPKAEPHCNCMHCQIARVLSEEEEATVSEQDLSFRTWDISPTGNKLYLVTNPLNPNEQFSVYLGTP IGCTCGQVNCEHIKAVLYT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29274; Mature: 29143
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLSNDSRVYPLEVVMKVKINDQLICIPPYISARWNQIAFIESQEGEVQGRPTLKLHLID CCCCCCCEEEEEEEEEEEEECCEEEEECCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEC GKTISIPNLDQAIIDIAFQEHLLHLESSQTMRDESSREDDKLGILINTLQQLSKDTDVQI CCEEECCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEE FAHKSLISPLFSGTSPMEMILQHTPEHKDHPDAPADILEKMVTVIRSLVGNNQNLFPKAE EEHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC PHCNCMHCQIARVLSEEEEATVSEQDLSFRTWDISPTGNKLYLVTNPLNPNEQFSVYLGT CCCCHHHHHHHHHHCCHHHHCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCEEEEECC PIGCTCGQVNCEHIKAVLYT CCCCCCCCCCHHHHEEEECC >Mature Secondary Structure TLSNDSRVYPLEVVMKVKINDQLICIPPYISARWNQIAFIESQEGEVQGRPTLKLHLID CCCCCCEEEEEEEEEEEEECCEEEEECCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEC GKTISIPNLDQAIIDIAFQEHLLHLESSQTMRDESSREDDKLGILINTLQQLSKDTDVQI CCEEECCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEE FAHKSLISPLFSGTSPMEMILQHTPEHKDHPDAPADILEKMVTVIRSLVGNNQNLFPKAE EEHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC PHCNCMHCQIARVLSEEEEATVSEQDLSFRTWDISPTGNKLYLVTNPLNPNEQFSVYLGT CCCCHHHHHHHHHHCCHHHHCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCEEEEECC PIGCTCGQVNCEHIKAVLYT CCCCCCCCCCHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA