Click here to switch to the map view.

The map label for this gene is 28572820

Identifier: 28572820

GI number: 28572820

Start: 768256

End: 769221

Strand: Reverse

Name: 28572820

Synonym: TW679

Alternate gene names: NA

Gene position: 769221-768256 (Counterclockwise)

Preceding gene: 28572821

Following gene: 28572819

Centisome position: 83.07

GC content: 52.38

Gene sequence:

>966_bases
ATGGTTGAAAAAGATCACTACGGGTCCATTTTTCACGAGCAACGTGATTTGTATGCCGGTAAGTCTGTTGTTCCGCTTGA
CCCTGCGCGAGTGCTTCGCCTCTTTGGCGAGGACAGGTTTAAAATCCTCCACGCAATCAGCACTCAGGACTATACCCAAC
CCATGATTTCGACCGAAACACTTTTTTTGAACTCTCAGGGCAGGGTTATCAATAGAGCCTGCGTTGTGGCTGCCCAAGAA
TGCGCGTGGCTGTTTTGTGATTCTGGCAAGCTCGCGGGACAGCTTGCCGAATACCTTCTTAGCATGCGGTTTACACTGAA
ATTTGATATTGAACCGGTAAAGGAGCTTTTTTTCTATGCCGGGTTTTGCGATCCACCAGAGCGTCTTGCTGAATGGCAGG
ATCCATGGCCCAATATCTGCCCGGGCGGTTATTCGTACGCCCCCACAGATCTTGAGCAACCCCCGTGGGGGATTAAGTTT
TTTCTGTGCAGAACACAACTTTCGGGGCCTTTTTCGGGCACTCACGCACTACTGGCAGGTTTGATTGCCGCAGGCCGCCC
CAGCATGCGAGAAGTTGATGAGTTAAGCCTGCCTCACGAGCTCGGTTGGTTGCGCACTGCGGTTCATCTGACTAAAGGCT
GTTACCGGGGTCAGGAACTTGTCGCTAAGCTGCACAATCTCGGTCGCCCGCCACGCCGTATGGTGCGGCTTATGCTGGAT
GGCCAGCTTCCCATGCCCGATGCGGTAATACTGTGTGATGGTAAACGGGTTGGCCGTGTTACATCTGTTGCTAATCATTG
GGAGCTTGGCCCAATCGCTCTTGGGGTTGTAAAACGCTCTGTTCCTGAGGGCAAGGTATTGCTTGTTGACTCTGAACAGG
GCCCAATCTCTGCTCTGGTTGAGACCTTGGTGTCTCCAGATTCCGGGTCTGTTGCATCTGTGCCGCGCATGAAAAGGCTA
ACATAA

Upstream 100 bases:

>100_bases
TTGAATCTGGATACAGCAGTTCCGTTTCGGATTGCACGGAGAGTATTGGCTGTTACCCTTGTTGCAACGGTGGAGCAGTA
GTATCGTGGGTAAATCGAAA

Downstream 100 bases:

>100_bases
CTTGTGTGACCCGAGTAAGCAAATTGTCACTAGACTTGGTGGGGTATGGATAATCTAGTTTTGCTACGTCACGGGAATAG
CCTATGGAATCAAGAGAATC

Product: hypothetical protein

Products: NA

Alternate protein names: Aminomethyltransferase; Glycine Cleavage System T Protein; Glycine Cleavage T-Protein; Aminomethyltransferase Related GcvT; Glycine Cleavage T-Protein C-Terminal Barrel; Glycine Cleavage T-Protein Aminomethyl Transferase; Glycine Cleavage Protein T

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MVEKDHYGSIFHEQRDLYAGKSVVPLDPARVLRLFGEDRFKILHAISTQDYTQPMISTETLFLNSQGRVINRACVVAAQE
CAWLFCDSGKLAGQLAEYLLSMRFTLKFDIEPVKELFFYAGFCDPPERLAEWQDPWPNICPGGYSYAPTDLEQPPWGIKF
FLCRTQLSGPFSGTHALLAGLIAAGRPSMREVDELSLPHELGWLRTAVHLTKGCYRGQELVAKLHNLGRPPRRMVRLMLD
GQLPMPDAVILCDGKRVGRVTSVANHWELGPIALGVVKRSVPEGKVLLVDSEQGPISALVETLVSPDSGSVASVPRMKRL
T

Sequences:

>Translated_321_residues
MVEKDHYGSIFHEQRDLYAGKSVVPLDPARVLRLFGEDRFKILHAISTQDYTQPMISTETLFLNSQGRVINRACVVAAQE
CAWLFCDSGKLAGQLAEYLLSMRFTLKFDIEPVKELFFYAGFCDPPERLAEWQDPWPNICPGGYSYAPTDLEQPPWGIKF
FLCRTQLSGPFSGTHALLAGLIAAGRPSMREVDELSLPHELGWLRTAVHLTKGCYRGQELVAKLHNLGRPPRRMVRLMLD
GQLPMPDAVILCDGKRVGRVTSVANHWELGPIALGVVKRSVPEGKVLLVDSEQGPISALVETLVSPDSGSVASVPRMKRL
T
>Mature_321_residues
MVEKDHYGSIFHEQRDLYAGKSVVPLDPARVLRLFGEDRFKILHAISTQDYTQPMISTETLFLNSQGRVINRACVVAAQE
CAWLFCDSGKLAGQLAEYLLSMRFTLKFDIEPVKELFFYAGFCDPPERLAEWQDPWPNICPGGYSYAPTDLEQPPWGIKF
FLCRTQLSGPFSGTHALLAGLIAAGRPSMREVDELSLPHELGWLRTAVHLTKGCYRGQELVAKLHNLGRPPRRMVRLMLD
GQLPMPDAVILCDGKRVGRVTSVANHWELGPIALGVVKRSVPEGKVLLVDSEQGPISALVETLVSPDSGSVASVPRMKRL
T

Specific function: Unknown

COG id: COG0354

COG function: function code R; Predicted aminomethyltransferase related to GcvT

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35699; Mature: 35699

Theoretical pI: Translated: 7.47; Mature: 7.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEKDHYGSIFHEQRDLYAGKSVVPLDPARVLRLFGEDRFKILHAISTQDYTQPMISTET
CCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHCCCHHHCCCCCEEE
LFLNSQGRVINRACVVAAQECAWLFCDSGKLAGQLAEYLLSMRFTLKFDIEPVKELFFYA
EEECCCCCCHHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHHEEEEECCCHHHHHHHHC
GFCDPPERLAEWQDPWPNICPGGYSYAPTDLEQPPWGIKFFLCRTQLSGPFSGTHALLAG
CCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHH
LIAAGRPSMREVDELSLPHELGWLRTAVHLTKGCYRGQELVAKLHNLGRPPRRMVRLMLD
HHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHC
GQLPMPDAVILCDGKRVGRVTSVANHWELGPIALGVVKRSVPEGKVLLVDSEQGPISALV
CCCCCCCEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCHHHHH
ETLVSPDSGSVASVPRMKRLT
HHHHCCCCCCCCCCCCHHCCC
>Mature Secondary Structure
MVEKDHYGSIFHEQRDLYAGKSVVPLDPARVLRLFGEDRFKILHAISTQDYTQPMISTET
CCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHCCCHHHCCCCCEEE
LFLNSQGRVINRACVVAAQECAWLFCDSGKLAGQLAEYLLSMRFTLKFDIEPVKELFFYA
EEECCCCCCHHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHHEEEEECCCHHHHHHHHC
GFCDPPERLAEWQDPWPNICPGGYSYAPTDLEQPPWGIKFFLCRTQLSGPFSGTHALLAG
CCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHH
LIAAGRPSMREVDELSLPHELGWLRTAVHLTKGCYRGQELVAKLHNLGRPPRRMVRLMLD
HHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHC
GQLPMPDAVILCDGKRVGRVTSVANHWELGPIALGVVKRSVPEGKVLLVDSEQGPISALV
CCCCCCCEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCHHHHH
ETLVSPDSGSVASVPRMKRLT
HHHHCCCCCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA