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Identifier: 27469198

GI number:

Start: 2353479

End: 2356988

Strand: Reverse

Name: Not Available

Synonym: SE2280

Alternate gene names: NA

Gene position: NA

Preceding gene: 27469199

Following gene: 27469197

Centisome position: NA

GC content: NA

Gene sequence:

>3510_bases
GTGAAATCAATGATTGCAAATTACATTAGCGAAGATAATCGTTTTCAAGAATTAGATGAAGTCTTCGGCCAAGAGAATAT
TTTAGTTACGGGATTATCCCCGTCAGCGAAGGCAACAATTATTGCTGAAAAATATTTAAAAGATCATAAACAAATGCTAC
TCGTAACTAATAATTTATACCAAGCAGATAAAATCGAAACTGACATTTTACAATATGTAGATGACTCAGAAGTTTATAAA
TATCCTGTTCAAGATATAATGACTGAAGAGTTTTCTACTCAAAGTCCACAATTGATGAGTGAGCGTGTTAGAACGTTGAC
TGCGTTAGCCCAAGGCGAAAAAGGGTTATTTATTGTGCCTTTAAACGGCTTTAAAAAATGGCTAACACCGGTTGATTTAT
GGAAAGATCATCAAATGACGCTTAAAGTAGGTCAGGATATTGATGTTGATGCATTCTTAAATAAATTAGTTAATATGGGT
TATCGCCGAGAAAGTGTAGTGTCACATATTGGTGAGTTTTCATTGCGTGGTGGAATCATAGATATATATCCGTTGATAGG
AACACCTGTGAGAATAGAGCTATTTGATACTGAAGTTGATTCCATCAGAGACTTTGATGTAGAAACACAACGTTCTAACG
ATAATATAAATCAAGTTGAAATCACAACAGCTAGTGACTACATTATTACTGATGAAGTGATACAACACTTACAAAATGAA
CTTAAAAAAGCATATGAATATACACGCCCTAAAATTGAAAAGTCCGTACGTAATGATTTAAAAGAGACATATGAAAGTTT
TAAGTTGTTTGAATCTACCTTTTTCGATCATCAATTGTTACGACGTCTTGTTTCATTTATGTATGAAAAACCATCAACCC
TTATTGACTATTTTCAAAAAAACGCGATTATTGTAGTTGATGAGTTTAATCGTATTAAGGAAACAGAAGAAACACTTACA
ACAGAAGTTGAAGATTTTATGAGTAACTTAATTGAGAGTGGAAATGGATTTATCGGACAAGGATTTATGAAGTATGAAAG
TTTTGACGCATTATTAGAGCAACATGCCGTTGCATATTTCACATTATTTACATCTTCGATGCAAGTACCATTACAACATA
TTATTAAGTTCTCTTGTAAACCAGTTCAACAATTTTATGGTCAATATGACATTATGCGCTCGGAATTTCAAAGATACGTG
CATCAAGATTACACTGTCGTAGTTCTTGTTGAAACTGAAACAAAAGTTGAACGTATTCAATCAATGCTTAATGAAATGCA
TATTCCAACAGTATCAAATATTCACGAAGATATTGATGGTGGTCAAGTTGTAGTGACGGAAGGTAGTCTTTCTGAAGGCT
TTGAATTACCTTATATGCAGTTGGTAGTCATCACAGAAAGAGAATTATTTAAAACAAGACAAAAGAAACAACGTAAACGT
ACAAAAACGATTTCTAATGCTGAAAAAATAAAATCATATCAAGACCTAAATGTGGGCGATTATATAGTGCATGTGCATCA
TGGTGTCGGACGATACTTAGGTGTTGAAACACTAGAAGTTGGAGATACACATCGCGACTATATTAAATTGCAATATAAAG
GAACTGATCAATTATTCGTTCCAGTTGATCAAATGGATCAAGTTCAAAAGTATGTGGCTTCTGAAGATAAGTCGCCTAGA
TTAAATAAATTAGGCGGGACAGAATGGAAAAAAACAAAGGCGAAAGTTCAACAAAGTGTTGAAGATATAGCTGATGAATT
AATTGATTTGTATAAAGAACGTGAAATGTCTGTAGGTTATCAATACGGCCAAGATACTGCAGAGCAATCAGCATTTGAGC
ATGATTTTCCATATGAATTAACACCCGATCAAAGTAAGTCAATCGATGAAATTAAAGGTGACATGGAAAGAGCAAGACCT
ATGGACCGTCTTCTTTGTGGTGATGTGGGATATGGTAAAACTGAAGTGGCTGTCCGTGCAGCGTTTAAAGCTGTCATGGA
TGGTAAGCAAGTTGCGTTTTTAGTACCAACAACGATTCTTGCACAACAACACTACGAAACACTACTTGAACGTATGCAAG
ATTTTCCGGTCGAAATTCAATTGGTAAGTCGATTCCGCACAGCTAAAGAAATAAGGGAAACTAAAGAAGGGCTCAAATCA
GGATATGTTGACATTGTCGTAGGTACACATAAATTATTAGGTAAAGATATTCAATATAAAGATTTGGGATTGCTTATTGT
TGATGAAGAACAACGTTTTGGAGTGCGACATAAAGAACGCATTAAAACTTTGAAAAAAAACGTTGATGTACTGACGCTTA
CTGCAACACCAATACCAAGAACATTGCATATGAGTATGTTAGGTGTACGTGACTTATCAGTGATTGAAACACCACCTGAA
AATCGTTTTCCTGTACAAACTTATGTCTTAGAACAGAATACGAACTTTATTAAAGAGGCATTAGAGCGTGAATTATCTCG
CGATGGACAAGTATTTTATTTGTATAACAAAGTGCAGTCCATTTATGAAAAAAGAGAACAACTTCAAAGGTTAATGCCTG
ACGCTAACATTGCTGTAGCACATGGCCAAATGACTGAACGTGATTTAGAGGAAACAATGTTAAGCTTTATTAATCACGAG
TACGATATTTTAGTAACGACTACAATTATTGAAACAGGTGTAGATGTACCAAATGCTAATACTTTAATCATAGAAGAGGC
TGATCGTTTTGGTTTAAGCCAGCTATACCAATTAAGAGGACGTGTAGGACGTTCAAGTAGAATTGGTTACGCTTATTTCT
TACATCCAGCTAACAAAGTGTTAAATGAGACTGCTGAAGAGCGATTGCAAACTATTAAGGAGTTTACCGAACTAGGTTCA
GGTTTTAAAATCGCTATGCGAGATTTAAATATTCGTGGTGCAGGCAATTTACTCGGTAAGCAACAACATGGCTTTATTGA
TTCGGTTGGTTTCGATTTATACTCTCAAATGTTAGAAGAAGCAGTAAACGAAAAACGTGGCATTAAAGAAGAATCGCCGG
ATGCACCAGATATTGAAGTAGAATTGCACTTAGATGCTTATTTACCAGCTGAATATATACAAAGTGAACAGGCTAAAATT
GAGATTTATAAAAAACTTCGAAAAGTAGAAACTGAAGAACAACTTTTCGATGTCAAAGATGAATTAATAGATCGTTTTAA
TGATTATCCAATTGAAGTCGAACGATTATTAGATATTGTTGAAATCAAAGTCCACGCTCTACATGCGGGTGTCGAATTGA
TAAAAGACAAAGGCAAATCTATACAAATCATTTTATCACCTAAAGCGACTGAAGATATTAATGGAGAAGAATTGTTTAAA
CAGACGCAACCTCTTGGTAGAGCAATGAAAGTTGGCGTGCAAAATAATGCAATGAATGTAACGCTAACAAAATCAAAACA
ATGGTTAGATAGTTTGAAATTCTTAGTTAGATGTATTGAAGAAAGTATGGCGATTAAAGATGAAGACTAA

Upstream 100 bases:

>100_bases
TTATGGAAAAGGTAATTGAACATTCTGCAAGAGCTGTAGAATCTTTTATTGAAAGTTCTCGTTTTGATCATGTTATGAAT
GAATTTAATGGTGAAGTCAA

Downstream 100 bases:

>100_bases
GAGTGAGACGGCGTTTAACGGCGTCGTTATACTTACCTTAGCATTAATTATTGTGAAGATACTAAGTGCCATTTATCGCA
TTCCGTATCAAAATGTTTTA

Product: transcription-repair coupling factor

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1169_residues
MKSMIANYISEDNRFQELDEVFGQENILVTGLSPSAKATIIAEKYLKDHKQMLLVTNNLYQADKIETDILQYVDDSEVYK
YPVQDIMTEEFSTQSPQLMSERVRTLTALAQGEKGLFIVPLNGFKKWLTPVDLWKDHQMTLKVGQDIDVDAFLNKLVNMG
YRRESVVSHIGEFSLRGGIIDIYPLIGTPVRIELFDTEVDSIRDFDVETQRSNDNINQVEITTASDYIITDEVIQHLQNE
LKKAYEYTRPKIEKSVRNDLKETYESFKLFESTFFDHQLLRRLVSFMYEKPSTLIDYFQKNAIIVVDEFNRIKETEETLT
TEVEDFMSNLIESGNGFIGQGFMKYESFDALLEQHAVAYFTLFTSSMQVPLQHIIKFSCKPVQQFYGQYDIMRSEFQRYV
HQDYTVVVLVETETKVERIQSMLNEMHIPTVSNIHEDIDGGQVVVTEGSLSEGFELPYMQLVVITERELFKTRQKKQRKR
TKTISNAEKIKSYQDLNVGDYIVHVHHGVGRYLGVETLEVGDTHRDYIKLQYKGTDQLFVPVDQMDQVQKYVASEDKSPR
LNKLGGTEWKKTKAKVQQSVEDIADELIDLYKEREMSVGYQYGQDTAEQSAFEHDFPYELTPDQSKSIDEIKGDMERARP
MDRLLCGDVGYGKTEVAVRAAFKAVMDGKQVAFLVPTTILAQQHYETLLERMQDFPVEIQLVSRFRTAKEIRETKEGLKS
GYVDIVVGTHKLLGKDIQYKDLGLLIVDEEQRFGVRHKERIKTLKKNVDVLTLTATPIPRTLHMSMLGVRDLSVIETPPE
NRFPVQTYVLEQNTNFIKEALERELSRDGQVFYLYNKVQSIYEKREQLQRLMPDANIAVAHGQMTERDLEETMLSFINHE
YDILVTTTIIETGVDVPNANTLIIEEADRFGLSQLYQLRGRVGRSSRIGYAYFLHPANKVLNETAEERLQTIKEFTELGS
GFKIAMRDLNIRGAGNLLGKQQHGFIDSVGFDLYSQMLEEAVNEKRGIKEESPDAPDIEVELHLDAYLPAEYIQSEQAKI
EIYKKLRKVETEEQLFDVKDELIDRFNDYPIEVERLLDIVEIKVHALHAGVELIKDKGKSIQIILSPKATEDINGEELFK
QTQPLGRAMKVGVQNNAMNVTLTKSKQWLDSLKFLVRCIEESMAIKDED

Sequences:
NA

Specific function: NA

COG id: COG1197

COG function: function code LK; Transcription-repair coupling factor (superfamily II helicase)

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA