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The map label for this gene is rsgA

Identifier: 27364685

GI number: 27364685

Start: 1269921

End: 1270979

Strand: Reverse

Name: rsgA

Synonym: VV1_1285

Alternate gene names: 27364685

Gene position: 1270979-1269921 (Counterclockwise)

Preceding gene: 27364689

Following gene: 27364684

Centisome position: 38.73

GC content: 48.25

Gene sequence:

>1059_bases
GTGGCAAAAAAGAAGAAGTTAACTCAGGGTCAAGTACGTCGTGTACGCGACAACCAACAAAAAAGACTGAAGAAACAAGC
CGACACCATTCAATGGGATGAAGCAATGTTGGGTGATAGCCGTAGAGGGCTAGTGATCACACGTTTCGGTCAACACGCAG
ATATTGAAGATGCCGAAACCGGGCTGATTGAGCGCTGTAATTTGCGTCGAGGTATTGAATCACTGGTTTCCGGTGACAAG
GTCATTTGGCGCAAAGGCTTAGAGTCAATGGCCGGAATTTCAGGCGTGGTTGAAGCTGTAGAGCCGCGTACTTCAGTGTT
AACTCGACCTGACTATTACGATGGTTTAAAACCCGTTGCGGCCAATATTGATCAAATGGTCATTGTCTCATCGGTGCTGC
CAGAGTTGTCACTCAATATCATTGATCGCTACTTGATTGCGGCAGAGACCCTTGGTATCGAGCCGCTGTTGGTGTTAAAC
AAAATCGATTTGTTGCAAGAAGCCGAGCTCGCTACGTATCGTGAGTGGTTGGCTGACTATGAGAAAATTGGCTACAAGAT
CCTTTATGTGAGCAAACGCTCTGGCGCTGGCATTGCAGAGCTCGAAGCGCAATTGCAAGATCGCATCAATATCTTCGTCG
GACAATCAGGCGTGGGTAAGTCGAGCTTGGTGAATGCGCTCATTCCTGAGCTGGATATCGAAGAAGGGGAAATCTCCGAG
CTATCCGGTTTGGGCCAACATACGACAACAGCAGCACGCCTCTATCACATTCCGTCAGGTGGTAACTTGATCGACTCTCC
AGGGGTTCGTGAGTTTGGGCTCTGGCACTTGGAGCCAGAAGAAATCACCAAAGCCTATCTTGAGTTTCGTCCTTACTTGG
GTGGCTGCAAGTTCCGAGATTGCAAGCACGCGGATGATCCAGGCTGTATCATTCGTGAGGCTGTAGAAAATGGTGAGATC
AGCGAAGTACGCTACGATAATTACCATCGCATTATTGAAAGCATGGCGGAGAACAAAGCCAATCGCCAATATTCGCGCAA
TAAGAAAGCGGACTTATAA

Upstream 100 bases:

>100_bases
GAGGTACTATACCTCAAAATAGTAATAACAAGATACTTCGATAATGTAGCGAAAGTCGTCATACTTAGCTCGTTATCAGC
GAACAAATAAAGTAGATATC

Downstream 100 bases:

>100_bases
CGCGTATTGTTGTGTAAGTTTTCGTCACCGATTACTGACAAGTGGAATAATTTTCAGTAACATCACGCGCCCGAAACAAG
AATCAAACAGACATCATCGG

Product: GTPase RsgA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 351

Protein sequence:

>352_residues
MAKKKKLTQGQVRRVRDNQQKRLKKQADTIQWDEAMLGDSRRGLVITRFGQHADIEDAETGLIERCNLRRGIESLVSGDK
VIWRKGLESMAGISGVVEAVEPRTSVLTRPDYYDGLKPVAANIDQMVIVSSVLPELSLNIIDRYLIAAETLGIEPLLVLN
KIDLLQEAELATYREWLADYEKIGYKILYVSKRSGAGIAELEAQLQDRINIFVGQSGVGKSSLVNALIPELDIEEGEISE
LSGLGQHTTTAARLYHIPSGGNLIDSPGVREFGLWHLEPEEITKAYLEFRPYLGGCKFRDCKHADDPGCIIREAVENGEI
SEVRYDNYHRIIESMAENKANRQYSRNKKADL

Sequences:

>Translated_352_residues
MAKKKKLTQGQVRRVRDNQQKRLKKQADTIQWDEAMLGDSRRGLVITRFGQHADIEDAETGLIERCNLRRGIESLVSGDK
VIWRKGLESMAGISGVVEAVEPRTSVLTRPDYYDGLKPVAANIDQMVIVSSVLPELSLNIIDRYLIAAETLGIEPLLVLN
KIDLLQEAELATYREWLADYEKIGYKILYVSKRSGAGIAELEAQLQDRINIFVGQSGVGKSSLVNALIPELDIEEGEISE
LSGLGQHTTTAARLYHIPSGGNLIDSPGVREFGLWHLEPEEITKAYLEFRPYLGGCKFRDCKHADDPGCIIREAVENGEI
SEVRYDNYHRIIESMAENKANRQYSRNKKADL
>Mature_351_residues
AKKKKLTQGQVRRVRDNQQKRLKKQADTIQWDEAMLGDSRRGLVITRFGQHADIEDAETGLIERCNLRRGIESLVSGDKV
IWRKGLESMAGISGVVEAVEPRTSVLTRPDYYDGLKPVAANIDQMVIVSSVLPELSLNIIDRYLIAAETLGIEPLLVLNK
IDLLQEAELATYREWLADYEKIGYKILYVSKRSGAGIAELEAQLQDRINIFVGQSGVGKSSLVNALIPELDIEEGEISEL
SGLGQHTTTAARLYHIPSGGNLIDSPGVREFGLWHLEPEEITKAYLEFRPYLGGCKFRDCKHADDPGCIIREAVENGEIS
EVRYDNYHRIIESMAENKANRQYSRNKKADL

Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover

COG id: COG1162

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 engC GTPase domain

Homologues:

Organism=Escherichia coli, GI87082381, Length=345, Percent_Identity=60, Blast_Score=431, Evalue=1e-122,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RSGA1_VIBVU (Q8DCV7)

Other databases:

- EMBL:   AE016795
- RefSeq:   NP_760213.1
- ProteinModelPortal:   Q8DCV7
- SMR:   Q8DCV7
- GeneID:   1178203
- GenomeReviews:   AE016795_GR
- KEGG:   vvu:VV1_1285
- HOGENOM:   HBG652450
- OMA:   FRDCKHL
- ProtClustDB:   PRK12288
- BioCyc:   VVUL216895:VV1_1285-MONOMER
- HAMAP:   MF_01820
- InterPro:   IPR010914
- InterPro:   IPR004881
- TIGRFAMs:   TIGR00157

Pfam domain/function: PF03193 DUF258

EC number: NA

Molecular weight: Translated: 39496; Mature: 39364

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: PS50936 ENGC_GTPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKKKLTQGQVRRVRDNQQKRLKKQADTIQWDEAMLGDSRRGLVITRFGQHADIEDAET
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEEECCCCCCCCHHHH
GLIERCNLRRGIESLVSGDKVIWRKGLESMAGISGVVEAVEPRTSVLTRPDYYDGLKPVA
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHCCCCHHH
ANIDQMVIVSSVLPELSLNIIDRYLIAAETLGIEPLLVLNKIDLLQEAELATYREWLADY
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EKIGYKILYVSKRSGAGIAELEAQLQDRINIFVGQSGVGKSSLVNALIPELDIEEGEISE
HHCCEEEEEEECCCCCCHHHHHHHHHHCEEEEECCCCCCHHHHHHHHCCCCCCCCCCHHH
LSGLGQHTTTAARLYHIPSGGNLIDSPGVREFGLWHLEPEEITKAYLEFRPYLGGCKFRD
HHCCCCHHHHEEEEEECCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHCCCCCCCCCCC
CKHADDPGCIIREAVENGEISEVRYDNYHRIIESMAENKANRQYSRNKKADL
CCCCCCCCHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AKKKKLTQGQVRRVRDNQQKRLKKQADTIQWDEAMLGDSRRGLVITRFGQHADIEDAET
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEEECCCCCCCCHHHH
GLIERCNLRRGIESLVSGDKVIWRKGLESMAGISGVVEAVEPRTSVLTRPDYYDGLKPVA
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHCCCCHHH
ANIDQMVIVSSVLPELSLNIIDRYLIAAETLGIEPLLVLNKIDLLQEAELATYREWLADY
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EKIGYKILYVSKRSGAGIAELEAQLQDRINIFVGQSGVGKSSLVNALIPELDIEEGEISE
HHCCEEEEEEECCCCCCHHHHHHHHHHCEEEEECCCCCCHHHHHHHHCCCCCCCCCCHHH
LSGLGQHTTTAARLYHIPSGGNLIDSPGVREFGLWHLEPEEITKAYLEFRPYLGGCKFRD
HHCCCCHHHHEEEEEECCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHCCCCCCCCCCC
CKHADDPGCIIREAVENGEISEVRYDNYHRIIESMAENKANRQYSRNKKADL
CCCCCCCCHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA