| Definition | Shewanella oneidensis MR-1, complete genome. |
|---|---|
| Accession | NC_004347 |
| Length | 4,969,803 |
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Identifier: 24376013
GI number:
Start: 4734044
End: 4738948
Strand: Reverse
Name: Not Available
Synonym: SO_4539
Alternate gene names: NA
Gene position: NA
Preceding gene: 24376018
Following gene: 28275293
Centisome position: NA
GC content: NA
Gene sequence:
>4905_bases ATGAAATTGAAGAAGATCAGCATAATGACCTTTGCGGCGCTATACGCGACCGGAATAGGGACATTAGTTGCCAATCCTTT AGATAGGAACCAAGCTGAGCAGAAACTCATTGGTATCAAGCTGGCACCAGAACAAATATTAGCCAATAAAAATAAACCTA CTCATCCGGCTCTGAATCGCGCTGACAGACCTGGCCAAATTGGTATGAACGTCCATCGCGCTGTAAATGGTAGTAGCCAT AAGGCGCCATTTGCTTGGGAAAAGGACATTGATGGAACGCATACCTATATTATTCAATTAATGGATGCCCCGGTTTCACT TTATCAGGGTGATAGACCTGAGTTTGCCGCAACGTCACCCCGTAGCAATCAGCCTGCAATACGTTCCAATGAGCGTTTTG GGACTATCGATTTAAAGAGCAATACAGTTAAAAACTACCAAGCTTTTTTAACGCGTTCTCAGGATGACACGGCTAGCCAA ATCAAGCGTGTTGCGCCAGATGCTGAAATAAAACGTCGCTTTAATGTGGCACTAAACGGCATGACCATGGTGTTAACTCA AGAACAAGCCGCTGAAGTAGCTAAGTTGCCCAATGTTAAAGTGGTGACTCGGGCGAAGGAATACCAATTATTCACCGATG TCGGTCCTAAGCATATTGGCGCTGATATGATTTGGCAGGGCACGAGCACTCCCGATGGCGTTGCTATGCGCGGTGAGGGC ATCATTGCCGGTATTATCGATACTGGGATTAACTCAGATCACCCCTCTTTTGCCGCAGTCTCGGCAGACGGTTATAAGCA CGTAAACCCATTAGGCGAAGGAAAATATCTGGGCGACTGCCAAGAATATCCTTTGATGTGTAACAGCAAGCTTATCGGTG TTCGTTCTTACGATATCATTACCGATACCTATAAAGATCCGATTTTCCAACCCGATCTGCCGCCATGGGAAGTTGATTAT AAACGCCCTCCAAACGGTGAAGATTACAACGGCCATGGTTCGCACACTGCCAGTACAGTTGCGGGTAACGTGCTCTACAA TGTGCCCTTTAAGCTCAATGGAACTGATGAAAAATCAGATGGTTTTGATACTTCTTTAGTCTTCCCTGAAATTTCAGGCG TTGCCCCGAGGGCCAACATTATTGCCTATCAAGTGTGCTATCCCGGTGGTGGGTCTTATGGCGAAACCTTCGGTGGTTGT CCTGGCGATGCATTGGTAGCCGCGATTGAAGATGCCATTATCGACGGCGTTGATGTGATTAACTTCTCCATCGGTGGGCT TGAAAATCTGCCTTGGTACGATGCCGTTGAAATGGCGTTTTTAGCTGCGCGTGAATCAGGGATCTCTGTTGCTGCCTCGG CGGGTAACTGGGGACGTTATGGCCCAGGTTATATCGACCATGTATCACCTTGGTTAACATCCGTTGCCGCCAGTACCCAT GGACGCCAAATTGAACCTGTTGAAGGCAAACTGTCTTTTGTGGGTGAAAATGCTCCCGAAGATATGACTGGCTATGCCGT AACAGGTGATATTACGGGTAATTTAGTTGATGCTGCCGCTCACAATGACCCTCTCTGTTTACAACCCTTCCCCGCGGGCA CTTTTAAAAGTGACGATGTTGTCATCTGTAAGCGTGGAGAAAATGGCCGAGTACAAAAAGGGATTAACGTTGCAGCAGGT GGCGCGGGCGGGATTATCCTGTATAACGCCGTTTCGTTTGATGATGGGACTGGCGCGAACAGCCTCAGCTTAAACCCTTT CCCGATCCCTGGAATGCATATTGATGCTGCATCAGGTAATCAGCTAGTGAAGTGGGTCGCCAACGCTACAGCACCAACAG TAACCATTACTGCAGGTAAAATTATCACCACAGAGCGTGAAGCCGATGTGTTAGCCGACTTTTCCTCCCGTGGCCCTAGC CATACAAACCCCAATGTGATGGTGCCTAACGTGTCCGCCCCTGGGGTGGATGTGTTTGCTGCCTACTCAGATGAAATGCC CTTCAATCTGTATCCATCGCCCAGCGATTATGTGGCAATCAGCGGTACCTCGATGTCAGGCCCCCATGTTGCAGGTGCAT TAGCACTGCTCACTCAGGCGCACCCACAGTGGACGCCTGCGATGATCCAGTCAGCCCTGATGACCACAGCCGTGTTAGGT AAAGCACCAACATACGAGAATCCACCAAAATTAGTGGATGCGACTTTCTACGATATGGGTAGCGGGGTGATTAACGTTGC CAGAGCCGTAAAAGCGGGTCTGGTGATGGATGAAAACGGTGATAATTACCGCGCCGCCAACCCGATGGAAGGTGGCGATG TGACCGCGTTAAACGTGCCTTACCTGGTTAATGCTGAATGTAAAAGTAGCTGCACTTGGATGCGTACCTTTACTGCCACG ACTGACGGTGAGTGGAACGTGAGGGCGACCGAAATCACCACAGAAGGCGCGCCTTTCCTTGAGCTAAGTGTTTATCCGCA AACGATTAAGTTAAAAGCGGGTGAGCAACAAAGTATTATGGTGACGGCGAAAATCCTCGATGTGACCTCAGTCAACGCTA ACTCTTCCTCAAACGAAGTGTTTGGTAAAATTGACCTGAAACCAACGGATGCCAGTTTGCCAGCTCAATACTTGCCTGTT ATGGCGCGCTTTACAGGCTCTAGCTTGCCAGAAATTGTCACGGGTAAAATCCATCGCGATACTGGCACCATGCTGACACC TGAGTTGATGACCAAAGAAATCAGCGAGCTTAATGTCAAAGTGAGCGGCTTAACGGCTGGTAAAGTAACTGAGCACAAGC TTAGCGCTGCCTATGTGAAGTTCCGCGATCCAGAAACCTTGGTCAATAACCCAGGTATTGTATTGCAGTTCTTTGATGTG CCAGAAGGTACTCGCCGCATTGTGTGGGAAGAGGTATCAGCTGATAAATCAGCATCGACGTCGTTAGATATTGGTATGGA TCTCAATAATAACGGCAAAGTGGAATGGTATGACGAGGCGATTTGTTACTCTTATACCGATGTTACCGACTATTGCGCGA TTAATGATCCAACGCCTGGTCGTTATTGGGTGATGTTAGGCAACTTTAAGCGCCCATGGGGAGATGAAATTGATACCAAA GACAACATTAAAGCGAGTCTGGCGATCATTTCCGACACTGATACTAAGCAACTTAATGTGACTGGGCTTGCCAGTACCAA TGGTATCGATCCTTACCAATTACAAATGAACTGGTCTGCCACTGGCAGTAAAGCGGGTGATCGCTTATACGGTTTGGTTG AAGTCGGTAATGGCGCGCAAAACGTAGGTAGCATTGGCAAAATGGCCGTGCATTTAGTGCATGAGGGCGATGATGTCAGT ATCACGACCAGCCAACAACAGGCCAAAGAAGGCGATGTTGTTGAGGTTAAGATGGTGATGGCACCAAACCTACTCGGATT AGAGCGCGATGTGAATATTGCCTTAACGCTGCCCGAAGGTTTGCAATTATTGCCTGACACGCTAAAAGCGAACAGCAATA ACCAAGATCTTAAAGCTGGCCTGACTGTTGCTGCACAGCAAATCACCCTGAAAGCGATGCAACAGGCGAGTAATGCGCAA AAACGTCAATACACCTTTACCACCAGTGAGACCGACGAGAGCTGTCGAATTCCTATCGGTTCGAATCCTTATTATTTGGA TTTATTTACCGAGGCAGGAATTGAGTCTGAAACAGCGATTGCTGGTCGGGTGAATGATACAGTAACTGTGCCATTAAGTA CGTTTGGTATTGATCGTATCCCGCTGTATAACAACCCAGAAGAATACTCACACAAAGATACCTTAAGTATTTCTCCTGGT GGCTTTATTCAGCTCGATCAACTACCACTGTTCTGGGCTGCTCACTACCCAATGGAAGAGCAATATTTCCCTGATACAGT GATTGCTCCGTTATGGCGTGGAGATGGTATTACCATCCCAGAATATAATATGGATAGCGAAAGCTTTGACGGTGTATCCC TTGCCGTGACGAACGACCGCCGCTACCTGATTGTTGAATGGGACAATATGCGTCAGGAGTTTGCCTTTGGTGTTAACCAT GATCCTGACTACGATGCTCGCTACAGCTTTGAGCTATTAGCTTCGACGCAGCTTAATTTTGCCCCAGGTGAACATGAGTT TATTTTTGCCTATGACAAATTAACGGGTAACAAAGCGCATTTAGGTTCAATTGGTTTACATGGTTACCATGGACCACGTG GCACCTTCGGCCCAGCGTATGGTTATATTGGCGATGGTTTTGCCTTTAACGATCTGGATAAGAAAATTGCAGAAGGCTTA GTGGTCTGTGCTAACTACACTGGACCTGAAGCGACGGCAATTGAACTATCATTCTCGGCCCGTGTTGGTGCTAAAGCTGT AGGTCAAGATCTGCAGATTATTGCTAAAAGTGATTACACCGGCAGCAATAGTATGACCTCTAGCGGAAGCTTCAAAGTAC CTTCAAACCTTGCGATAGGTGCCCTTGGCAATATGTCCGTTGCTGAAAACACCAGCATCAGTTTTGAGGTGCTAGTGCAA GATAAAGAAAATACCGCTAATGGTATCCAAGTGACAGGCGCGCACATCACGTCAGTCGTTAATGGCAACAAAGTCACCAT CACACCCGAAAAAGATTGGCACGGTACAACCACTGTCACAGTGAAAGCCTTTGATAAGGTTTATCAAAATGACATGGTGC AAACGAGCTTCAACTTAGTCGTGAACTCTGATGGTGTGGAGCCAACGCCGCCGACTCCACCTACGCCTCCAACGCCTCCT GTGGAAGAGACTAAAGATAGCAGTGGCGGTAGCTTGGGCTGGCTTGCTGTCCTGATGCTTGGATTGATGGCAGTATCACG TCAAAAATGGAATGTTAATAAGTAA
Upstream 100 bases:
>100_bases GCGATACGCAAAAAGCATTGGCCTTAAAGTATGGCTGACGGTAACTATTCATTCCGCAAATAAACAAATTTGCAACATAA CTCTAACAAAGGAATGAGTA
Downstream 100 bases:
>100_bases ACTTCACCTTTAAGCAGTACCTTGTCTTTGGGCCTTCTAACGAAGGCCCTTTTTTATGCGCTTAAGTTTGGGATTGTCTT GCCTATGATTCTGATACCAG
Product: serine protease
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1634_residues MKLKKISIMTFAALYATGIGTLVANPLDRNQAEQKLIGIKLAPEQILANKNKPTHPALNRADRPGQIGMNVHRAVNGSSH KAPFAWEKDIDGTHTYIIQLMDAPVSLYQGDRPEFAATSPRSNQPAIRSNERFGTIDLKSNTVKNYQAFLTRSQDDTASQ IKRVAPDAEIKRRFNVALNGMTMVLTQEQAAEVAKLPNVKVVTRAKEYQLFTDVGPKHIGADMIWQGTSTPDGVAMRGEG IIAGIIDTGINSDHPSFAAVSADGYKHVNPLGEGKYLGDCQEYPLMCNSKLIGVRSYDIITDTYKDPIFQPDLPPWEVDY KRPPNGEDYNGHGSHTASTVAGNVLYNVPFKLNGTDEKSDGFDTSLVFPEISGVAPRANIIAYQVCYPGGGSYGETFGGC PGDALVAAIEDAIIDGVDVINFSIGGLENLPWYDAVEMAFLAARESGISVAASAGNWGRYGPGYIDHVSPWLTSVAASTH GRQIEPVEGKLSFVGENAPEDMTGYAVTGDITGNLVDAAAHNDPLCLQPFPAGTFKSDDVVICKRGENGRVQKGINVAAG GAGGIILYNAVSFDDGTGANSLSLNPFPIPGMHIDAASGNQLVKWVANATAPTVTITAGKIITTEREADVLADFSSRGPS HTNPNVMVPNVSAPGVDVFAAYSDEMPFNLYPSPSDYVAISGTSMSGPHVAGALALLTQAHPQWTPAMIQSALMTTAVLG KAPTYENPPKLVDATFYDMGSGVINVARAVKAGLVMDENGDNYRAANPMEGGDVTALNVPYLVNAECKSSCTWMRTFTAT TDGEWNVRATEITTEGAPFLELSVYPQTIKLKAGEQQSIMVTAKILDVTSVNANSSSNEVFGKIDLKPTDASLPAQYLPV MARFTGSSLPEIVTGKIHRDTGTMLTPELMTKEISELNVKVSGLTAGKVTEHKLSAAYVKFRDPETLVNNPGIVLQFFDV PEGTRRIVWEEVSADKSASTSLDIGMDLNNNGKVEWYDEAICYSYTDVTDYCAINDPTPGRYWVMLGNFKRPWGDEIDTK DNIKASLAIISDTDTKQLNVTGLASTNGIDPYQLQMNWSATGSKAGDRLYGLVEVGNGAQNVGSIGKMAVHLVHEGDDVS ITTSQQQAKEGDVVEVKMVMAPNLLGLERDVNIALTLPEGLQLLPDTLKANSNNQDLKAGLTVAAQQITLKAMQQASNAQ KRQYTFTTSETDESCRIPIGSNPYYLDLFTEAGIESETAIAGRVNDTVTVPLSTFGIDRIPLYNNPEEYSHKDTLSISPG GFIQLDQLPLFWAAHYPMEEQYFPDTVIAPLWRGDGITIPEYNMDSESFDGVSLAVTNDRRYLIVEWDNMRQEFAFGVNH DPDYDARYSFELLASTQLNFAPGEHEFIFAYDKLTGNKAHLGSIGLHGYHGPRGTFGPAYGYIGDGFAFNDLDKKIAEGL VVCANYTGPEATAIELSFSARVGAKAVGQDLQIIAKSDYTGSNSMTSSGSFKVPSNLAIGALGNMSVAENTSISFEVLVQ DKENTANGIQVTGAHITSVVNGNKVTITPEKDWHGTTTVTVKAFDKVYQNDMVQTSFNLVVNSDGVEPTPPTPPTPPTPP VEETKDSSGGSLGWLAVLMLGLMAVSRQKWNVNK
Sequences:
NA
Specific function: NA
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA