Click here to switch to the map view.

The map label for this gene is 23501755

Identifier: 23501755

GI number: 23501755

Start: 841516

End: 842157

Strand: Reverse

Name: 23501755

Synonym: BR0869

Alternate gene names: NA

Gene position: 842157-841516 (Counterclockwise)

Preceding gene: 23501756

Following gene: 23501754

Centisome position: 39.95

GC content: 59.97

Gene sequence:

>642_bases
ATGGAATTCATGGAAAAACTGGACGAGCTCAGGCACTCGATCCAGGCTTGCCGCCTCTGCCGCGACACGCCGCTGTTTCC
GCCACCGCTACCGCATGAACCCAATCCCGTCTGTATCATTTCCGATACGGCGCGCATTGCCATTTGCGGACAGGCGCCGG
GAATTCGGGTGCACAACACCTCCCTGCCGTTCAACGACCCGTCGGGCGACCGCCTGCGGCAATGGCTCGGTGTTACGCGC
GAGGAGTTTTACGACGCCTCCCGTTTCGCCATCGTTCCGATGGGCTTCTGCTTTCCGGGTTATGACAAGAACGGCGGCGA
CCTGCCGCCGCGCAGGGAATGCCGCCAGACATGGCATGACCGGGTGTTTGCGGCCATGCCGCAACTGGAGTTCATTCTGG
TGGTCGGGCAATATGCCCTTGCCTATCACCTGCCGGACTATCGCGGGCGCAATCTCACGGAAACCGTGAAGAACTGGCGG
CATTTCATGGAAACGCCGAGCCATACCGGGCGCATCGCCCTGCCCCTGCCGCATCCTTCATGGCGCAATAGCGGCTGGCT
GAAGCGAAATCCGTGGTTCGACATGGAAGTCGTGCCTGTTCTTCAGGCAAAAGTCCGCCATCTCATTGATGACGAGAAAT
AA

Upstream 100 bases:

>100_bases
ATGAAACCCTTCGCCCGAAAAGGATGCAATTGGCCGAATGCCTGTCTATATAAGAGGGCATAATCAGGCCCTCATCGATC
TGCCCCTGTTCCGGAGTTGA

Downstream 100 bases:

>100_bases
ATTTTACTGTCGATATTTTCATCAGAATAATTTTTCTGTAACTTCGAGCAATGGCGAACCATAAGGTATGACGTTTCAGC
TTTTCGTAAAGTTGAGGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MEFMEKLDELRHSIQACRLCRDTPLFPPPLPHEPNPVCIISDTARIAICGQAPGIRVHNTSLPFNDPSGDRLRQWLGVTR
EEFYDASRFAIVPMGFCFPGYDKNGGDLPPRRECRQTWHDRVFAAMPQLEFILVVGQYALAYHLPDYRGRNLTETVKNWR
HFMETPSHTGRIALPLPHPSWRNSGWLKRNPWFDMEVVPVLQAKVRHLIDDEK

Sequences:

>Translated_213_residues
MEFMEKLDELRHSIQACRLCRDTPLFPPPLPHEPNPVCIISDTARIAICGQAPGIRVHNTSLPFNDPSGDRLRQWLGVTR
EEFYDASRFAIVPMGFCFPGYDKNGGDLPPRRECRQTWHDRVFAAMPQLEFILVVGQYALAYHLPDYRGRNLTETVKNWR
HFMETPSHTGRIALPLPHPSWRNSGWLKRNPWFDMEVVPVLQAKVRHLIDDEK
>Mature_213_residues
MEFMEKLDELRHSIQACRLCRDTPLFPPPLPHEPNPVCIISDTARIAICGQAPGIRVHNTSLPFNDPSGDRLRQWLGVTR
EEFYDASRFAIVPMGFCFPGYDKNGGDLPPRRECRQTWHDRVFAAMPQLEFILVVGQYALAYHLPDYRGRNLTETVKNWR
HFMETPSHTGRIALPLPHPSWRNSGWLKRNPWFDMEVVPVLQAKVRHLIDDEK

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005122 [H]

Pfam domain/function: PF03167 UDG [H]

EC number: NA

Molecular weight: Translated: 24711; Mature: 24711

Theoretical pI: Translated: 7.88; Mature: 7.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFMEKLDELRHSIQACRLCRDTPLFPPPLPHEPNPVCIISDTARIAICGQAPGIRVHNT
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCEEEEECCCCCEEEECC
SLPFNDPSGDRLRQWLGVTREEFYDASRFAIVPMGFCFPGYDKNGGDLPPRRECRQTWHD
CCCCCCCCHHHHHHHHCCCHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHH
RVFAAMPQLEFILVVGQYALAYHLPDYRGRNLTETVKNWRHFMETPSHTGRIALPLPHPS
HHHHHCCCCEEEEHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCC
WRNSGWLKRNPWFDMEVVPVLQAKVRHLIDDEK
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEFMEKLDELRHSIQACRLCRDTPLFPPPLPHEPNPVCIISDTARIAICGQAPGIRVHNT
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCEEEEECCCCCEEEECC
SLPFNDPSGDRLRQWLGVTREEFYDASRFAIVPMGFCFPGYDKNGGDLPPRRECRQTWHD
CCCCCCCCHHHHHHHHCCCHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHH
RVFAAMPQLEFILVVGQYALAYHLPDYRGRNLTETVKNWRHFMETPSHTGRIALPLPHPS
HHHHHCCCCEEEEHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCC
WRNSGWLKRNPWFDMEVVPVLQAKVRHLIDDEK
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]