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The map label for this gene is fabF [H]

Identifier: 23501741

GI number: 23501741

Start: 828192

End: 829373

Strand: Reverse

Name: fabF [H]

Synonym: BR0854

Alternate gene names: 23501741

Gene position: 829373-828192 (Counterclockwise)

Preceding gene: 23501742

Following gene: 23501740

Centisome position: 39.35

GC content: 60.83

Gene sequence:

>1182_bases
ATGCAGAACAACAAAGTCGTCATAACCGGCATCGGCCTCATTTCTTCGCTTGGCGAAGGCGTGGAGGCGCATTGGAATGC
TTTCTCGAAAGCCGGTACGCAGCCGCACCTCGAAAAGCAGGCTTTTGCGCCCTATACCGTTCACCCGCTTGGTGAAGTGG
ACTGGAGCCTGCAAATTCCAAAGCGTGGCGATCAGCGCCAGATGGAAACCTGGCAGCGGCTCGGCACCTATGCCGCCGGT
CTCGCCCTGCAGGATGCCGGCATGAAGGGCGATGAGGCGCTGTGCGCGACCATGGATATGATCGTCGGCGCCGGTGGCGG
CGAGCGTGATATCACCGTCGATATGCAGATTCTCGAAGAAGGCCGCACCAGTAACAATCGCGGCGTGATGCTGAACGAGA
AGCTGTCCACGGAACTGCGCCCTACCCTGTTCCTGGCCCAGCTTTCCAATCTGCTGGCAGGCAATATTTCGATTGTTCAC
AAGGTTACAGGCTCTTCCCGCACCTTCATGGGCGAGGAAGGCTCCGGCATTTCGGCTATCGAAACCGCTGCGGCCCGCAT
CCGCACCGGCCAGAGCACCCATGCGCTCGTTGGCGGTTCCTATAATGCCGAACATTTCGACATGATTCTCGGTGCTGAAC
TTGGCGGCCTGCTCAAGCATGACGGCTGGGCGGCGCTGTGGAGCCGCGACGGTTCGGCTGGCGGCGGAATGATTTCGGGT
TCCGGCGGCGTCTTTCTGGTTCTGGAAAGTGTGGACCATGCGCAAAAGCGCGGTGCACGCGCCTATGCGGAGATCAGCGG
CATCGAGAGCGCACAGATCCGCCGCAGCACTGCCGACCTCGAAAAAACCGTGCGCGAACTCGTGCTTGCGGCAAATGGCG
GCAAAAATCCGGCCTATGTGGTTTCCGGTGCATCGGGCGCACATGCGGCAACCGCTGCCGAAAAGGCGGCGCTTGAGAGT
GTTTCGGCTGCCTATCGCGGCATTAGCGGCCTGACCGGCCATCTGCGTGAAGCACAGTTTCCGCTGGCGCTGGCGCTTGG
CGCAATTTCCGTCTGGAAAGGCGAAGCCTTCGCCCCGCTGGATGCTTCGGAAAAGCCTGCCAGCGGCGCGGTCAGCGAAG
CCATTGTCACCACCATCGGGGCAACTCGCGCTGAAGGCGCAGCAAAGCTGGTGAGAGCATAA

Upstream 100 bases:

>100_bases
TTTCCGTTCGGGAATGCATCTGGAAAATTGGGGTGGGCAGAAATGTTCGCTCTGATTCCGTTTCTGGAGCAGTGTCAGCA
TCGACGGACGAACGGGACCC

Downstream 100 bases:

>100_bases
GATGACGAAATATACAGACCATCTCGGCCGTCCCATCGTCGCCATCACCGGCGCAGGTGTCGTTTCCTCGCTCGGTCAGG
GCAAGGACGACAACTGGGCG

Product: 3-oxoacyl-(acyl carrier protein) synthase II

Products: NA

Alternate protein names: 3-oxoacyl-[acyl-carrier-protein] synthase II; Beta-ketoacyl-ACP synthase II; KAS II [H]

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
MQNNKVVITGIGLISSLGEGVEAHWNAFSKAGTQPHLEKQAFAPYTVHPLGEVDWSLQIPKRGDQRQMETWQRLGTYAAG
LALQDAGMKGDEALCATMDMIVGAGGGERDITVDMQILEEGRTSNNRGVMLNEKLSTELRPTLFLAQLSNLLAGNISIVH
KVTGSSRTFMGEEGSGISAIETAAARIRTGQSTHALVGGSYNAEHFDMILGAELGGLLKHDGWAALWSRDGSAGGGMISG
SGGVFLVLESVDHAQKRGARAYAEISGIESAQIRRSTADLEKTVRELVLAANGGKNPAYVVSGASGAHAATAAEKAALES
VSAAYRGISGLTGHLREAQFPLALALGAISVWKGEAFAPLDASEKPASGAVSEAIVTTIGATRAEGAAKLVRA

Sequences:

>Translated_393_residues
MQNNKVVITGIGLISSLGEGVEAHWNAFSKAGTQPHLEKQAFAPYTVHPLGEVDWSLQIPKRGDQRQMETWQRLGTYAAG
LALQDAGMKGDEALCATMDMIVGAGGGERDITVDMQILEEGRTSNNRGVMLNEKLSTELRPTLFLAQLSNLLAGNISIVH
KVTGSSRTFMGEEGSGISAIETAAARIRTGQSTHALVGGSYNAEHFDMILGAELGGLLKHDGWAALWSRDGSAGGGMISG
SGGVFLVLESVDHAQKRGARAYAEISGIESAQIRRSTADLEKTVRELVLAANGGKNPAYVVSGASGAHAATAAEKAALES
VSAAYRGISGLTGHLREAQFPLALALGAISVWKGEAFAPLDASEKPASGAVSEAIVTTIGATRAEGAAKLVRA
>Mature_393_residues
MQNNKVVITGIGLISSLGEGVEAHWNAFSKAGTQPHLEKQAFAPYTVHPLGEVDWSLQIPKRGDQRQMETWQRLGTYAAG
LALQDAGMKGDEALCATMDMIVGAGGGERDITVDMQILEEGRTSNNRGVMLNEKLSTELRPTLFLAQLSNLLAGNISIVH
KVTGSSRTFMGEEGSGISAIETAAARIRTGQSTHALVGGSYNAEHFDMILGAELGGLLKHDGWAALWSRDGSAGGGMISG
SGGVFLVLESVDHAQKRGARAYAEISGIESAQIRRSTADLEKTVRELVLAANGGKNPAYVVSGASGAHAATAAEKAALES
VSAAYRGISGLTGHLREAQFPLALALGAISVWKGEAFAPLDASEKPASGAVSEAIVTTIGATRAEGAAKLVRA

Specific function: Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates and may function to supply the octanoic substrates for lipoic acid biosynthes

COG id: COG0304

COG function: function code IQ; 3-oxoacyl-(acyl-carrier-protein) synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the beta-ketoacyl-ACP synthases family [H]

Homologues:

Organism=Escherichia coli, GI1787337, Length=282, Percent_Identity=26.9503546099291, Blast_Score=72, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017568
- InterPro:   IPR000794
- InterPro:   IPR018201
- InterPro:   IPR014031
- InterPro:   IPR014030
- InterPro:   IPR016039
- InterPro:   IPR016038 [H]

Pfam domain/function: PF00109 ketoacyl-synt; PF02801 Ketoacyl-synt_C [H]

EC number: =2.3.1.179 [H]

Molecular weight: Translated: 40902; Mature: 40902

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNNKVVITGIGLISSLGEGVEAHWNAFSKAGTQPHLEKQAFAPYTVHPLGEVDWSLQIP
CCCCEEEEEECHHHHHHCCCHHHHHHHHHHCCCCCCCHHHCCCCEEECCCCCCCEEEECC
KRGDQRQMETWQRLGTYAAGLALQDAGMKGDEALCATMDMIVGAGGGERDITVDMQILEE
CCCCHHHHHHHHHHHHHHHCEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEHHHHHC
GRTSNNRGVMLNEKLSTELRPTLFLAQLSNLLAGNISIVHKVTGSSRTFMGEEGSGISAI
CCCCCCCCEEECHHHCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCEECCCCCCCCHHH
ETAAARIRTGQSTHALVGGSYNAEHFDMILGAELGGLLKHDGWAALWSRDGSAGGGMISG
HHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEC
SGGVFLVLESVDHAQKRGARAYAEISGIESAQIRRSTADLEKTVRELVLAANGGKNPAYV
CCCEEEEEECHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
VSGASGAHAATAAEKAALESVSAAYRGISGLTGHLREAQFPLALALGAISVWKGEAFAPL
EECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCC
DASEKPASGAVSEAIVTTIGATRAEGAAKLVRA
CCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCC
>Mature Secondary Structure
MQNNKVVITGIGLISSLGEGVEAHWNAFSKAGTQPHLEKQAFAPYTVHPLGEVDWSLQIP
CCCCEEEEEECHHHHHHCCCHHHHHHHHHHCCCCCCCHHHCCCCEEECCCCCCCEEEECC
KRGDQRQMETWQRLGTYAAGLALQDAGMKGDEALCATMDMIVGAGGGERDITVDMQILEE
CCCCHHHHHHHHHHHHHHHCEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEHHHHHC
GRTSNNRGVMLNEKLSTELRPTLFLAQLSNLLAGNISIVHKVTGSSRTFMGEEGSGISAI
CCCCCCCCEEECHHHCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCEECCCCCCCCHHH
ETAAARIRTGQSTHALVGGSYNAEHFDMILGAELGGLLKHDGWAALWSRDGSAGGGMISG
HHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEC
SGGVFLVLESVDHAQKRGARAYAEISGIESAQIRRSTADLEKTVRELVLAANGGKNPAYV
CCCEEEEEECHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
VSGASGAHAATAAEKAALESVSAAYRGISGLTGHLREAQFPLALALGAISVWKGEAFAPL
EECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCC
DASEKPASGAVSEAIVTTIGATRAEGAAKLVRA
CCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8550484 [H]