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The map label for this gene is yjiA [H]

Identifier: 23100888

GI number: 23100888

Start: 3571906

End: 3572877

Strand: Reverse

Name: yjiA [H]

Synonym: OB3433

Alternate gene names: 23100888

Gene position: 3572877-3571906 (Counterclockwise)

Preceding gene: 23100889

Following gene: 23100887

Centisome position: 98.41

GC content: 32.1

Gene sequence:

>972_bases
ATGGAGAACGATGCAAGGACGCCAGTTACTATAGTGACGGGATATTTAGGTGCAGGTAAAACAAGTTTTTTAAACCACAT
TCTTCACCAAACAAGTGAAAAATTGGCTATAATCGTAAACGAATATGGTGATATAGGTATTGATGATCAGTTAATAGAAA
AGACAAAAGAAGAGATTATTGAAATCAATAAAGGTTGTATATGCTGTAATGTACGCAAAGATTTAATAGACACATTATCG
ATGCTTTTATTTACAAGAGAACAAGGAATGATTGAATTCGATAGAGTACTTATAGAAACAACTGGCTTAGCAGATCCGGC
ACCGATTGTCCAGACATTCCTAATGGATCCCAAAATGATTGAATCGTACGACATAGATAGTGTCTGTACGATTGTGGATA
GTAAGCATATTTCCATGCATTTAGATCAGAAAGATGAATCACTTAGCCAAATAGCATTTTCAGATAATATCTTGTTAAAT
AAGATTGATCTAATTTCTAGTGAACAGTTAGAAAAGCTGAAAGAGAGAATAACAAAGATAAATCCGTTCGCTAATATATA
TGAAACAACAAAAAGTAATATTGATATAAATAAAGTGTTCAATCTCTATTCATTTGATTTAAAGGATAAATTACGAATAA
GTCCAACGTTTTTACATGATACCCATCACCATCATGATAACGTGACTTCTTTATCGTTAATAGAAACAAAACCTCTAGAT
TTGGAAAAACTAAATCTGTGGTTCTCTTATCTAGTTCAAATACTTGGAGAAAGTTTATACCGTTACAAAGGTATTTTATA
TATCAATGGAAAAAGGAGAAAATATATTTTTCAAGGTGTTCATATGTTGTTTGCAGCAGAAGAACAAGCCGAATGGGGAG
ATATGTCACCAAGAAGCGAGATCGTATTTATCGGGAAAGACTTAAACAAGCAAAAATTGAAGGAGCAATTTCATAAATGT
ATTTCAAGGTAA

Upstream 100 bases:

>100_bases
ATACTAAAGTTGAACTTTCCTAAGGGGTTCATATTTTTTGAGTTTTTATTCGTAATGATTACGGATATTTAATAATTCAT
TTAGAGGAGAATTTGAAAAC

Downstream 100 bases:

>100_bases
AAAATTTTAAAAGTTTAATCGTAATCGTTACGATGTAGAAAGAAGGAATAAGATGGTTAAACACTATGATGTTCTAATCG
TTGGAGCGGGAGCATCAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MENDARTPVTIVTGYLGAGKTSFLNHILHQTSEKLAIIVNEYGDIGIDDQLIEKTKEEIIEINKGCICCNVRKDLIDTLS
MLLFTREQGMIEFDRVLIETTGLADPAPIVQTFLMDPKMIESYDIDSVCTIVDSKHISMHLDQKDESLSQIAFSDNILLN
KIDLISSEQLEKLKERITKINPFANIYETTKSNIDINKVFNLYSFDLKDKLRISPTFLHDTHHHHDNVTSLSLIETKPLD
LEKLNLWFSYLVQILGESLYRYKGILYINGKRRKYIFQGVHMLFAAEEQAEWGDMSPRSEIVFIGKDLNKQKLKEQFHKC
ISR

Sequences:

>Translated_323_residues
MENDARTPVTIVTGYLGAGKTSFLNHILHQTSEKLAIIVNEYGDIGIDDQLIEKTKEEIIEINKGCICCNVRKDLIDTLS
MLLFTREQGMIEFDRVLIETTGLADPAPIVQTFLMDPKMIESYDIDSVCTIVDSKHISMHLDQKDESLSQIAFSDNILLN
KIDLISSEQLEKLKERITKINPFANIYETTKSNIDINKVFNLYSFDLKDKLRISPTFLHDTHHHHDNVTSLSLIETKPLD
LEKLNLWFSYLVQILGESLYRYKGILYINGKRRKYIFQGVHMLFAAEEQAEWGDMSPRSEIVFIGKDLNKQKLKEQFHKC
ISR
>Mature_323_residues
MENDARTPVTIVTGYLGAGKTSFLNHILHQTSEKLAIIVNEYGDIGIDDQLIEKTKEEIIEINKGCICCNVRKDLIDTLS
MLLFTREQGMIEFDRVLIETTGLADPAPIVQTFLMDPKMIESYDIDSVCTIVDSKHISMHLDQKDESLSQIAFSDNILLN
KIDLISSEQLEKLKERITKINPFANIYETTKSNIDINKVFNLYSFDLKDKLRISPTFLHDTHHHHDNVTSLSLIETKPLD
LEKLNLWFSYLVQILGESLYRYKGILYINGKRRKYIFQGVHMLFAAEEQAEWGDMSPRSEIVFIGKDLNKQKLKEQFHKC
ISR

Specific function: Binds GTP. May function as GTP-dependent regulator [H]

COG id: COG0523

COG function: function code R; Putative GTPases (G3E family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cobW C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI33469141, Length=341, Percent_Identity=33.4310850439883, Blast_Score=179, Evalue=3e-45,
Organism=Homo sapiens, GI126722884, Length=341, Percent_Identity=33.4310850439883, Blast_Score=178, Evalue=5e-45,
Organism=Homo sapiens, GI148727351, Length=341, Percent_Identity=33.7243401759531, Blast_Score=177, Evalue=1e-44,
Organism=Homo sapiens, GI146231952, Length=341, Percent_Identity=33.4310850439883, Blast_Score=174, Evalue=1e-43,
Organism=Homo sapiens, GI223941779, Length=339, Percent_Identity=33.0383480825959, Blast_Score=161, Evalue=9e-40,
Organism=Homo sapiens, GI223941776, Length=329, Percent_Identity=31.9148936170213, Blast_Score=158, Evalue=6e-39,
Organism=Homo sapiens, GI119120938, Length=334, Percent_Identity=30.5389221556886, Blast_Score=126, Evalue=3e-29,
Organism=Homo sapiens, GI310124599, Length=189, Percent_Identity=30.6878306878307, Blast_Score=82, Evalue=9e-16,
Organism=Homo sapiens, GI310124603, Length=225, Percent_Identity=29.7777777777778, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI169184311, Length=170, Percent_Identity=30, Blast_Score=70, Evalue=2e-12,
Organism=Escherichia coli, GI87082430, Length=310, Percent_Identity=37.0967741935484, Blast_Score=215, Evalue=3e-57,
Organism=Escherichia coli, GI1788499, Length=174, Percent_Identity=34.4827586206897, Blast_Score=85, Evalue=6e-18,
Organism=Saccharomyces cerevisiae, GI6324356, Length=366, Percent_Identity=27.5956284153005, Blast_Score=124, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003495
- InterPro:   IPR011629 [H]

Pfam domain/function: PF02492 cobW; PF07683 CobW_C [H]

EC number: NA

Molecular weight: Translated: 37232; Mature: 37232

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENDARTPVTIVTGYLGAGKTSFLNHILHQTSEKLAIIVNEYGDIGIDDQLIEKTKEEII
CCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHH
EINKGCICCNVRKDLIDTLSMLLFTREQGMIEFDRVLIETTGLADPAPIVQTFLMDPKMI
HHCCCEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHEECCCCCCHHHHHHHHCCCHHH
ESYDIDSVCTIVDSKHISMHLDQKDESLSQIAFSDNILLNKIDLISSEQLEKLKERITKI
HCCCCCHHHHHCCCCCEEEEECCCHHHHHHHHHCCCEEEEHHHHCCHHHHHHHHHHHHHC
NPFANIYETTKSNIDINKVFNLYSFDLKDKLRISPTFLHDTHHHHDNVTSLSLIETKPLD
CCHHHHHHHHCCCCCHHHHHHHHEECCCCCEECCEEEECCCCCCCCCCCEEEEEECCCCC
LEKLNLWFSYLVQILGESLYRYKGILYINGKRRKYIFQGVHMLFAAEEQAEWGDMSPRSE
HHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHEECHHCCCCCCCCCCC
IVFIGKDLNKQKLKEQFHKCISR
EEEEECCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MENDARTPVTIVTGYLGAGKTSFLNHILHQTSEKLAIIVNEYGDIGIDDQLIEKTKEEII
CCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHH
EINKGCICCNVRKDLIDTLSMLLFTREQGMIEFDRVLIETTGLADPAPIVQTFLMDPKMI
HHCCCEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHEECCCCCCHHHHHHHHCCCHHH
ESYDIDSVCTIVDSKHISMHLDQKDESLSQIAFSDNILLNKIDLISSEQLEKLKERITKI
HCCCCCHHHHHCCCCCEEEEECCCHHHHHHHHHCCCEEEEHHHHCCHHHHHHHHHHHHHC
NPFANIYETTKSNIDINKVFNLYSFDLKDKLRISPTFLHDTHHHHDNVTSLSLIETKPLD
CCHHHHHHHHCCCCCHHHHHHHHEECCCCCEECCEEEECCCCCCCCCCCEEEEEECCCCC
LEKLNLWFSYLVQILGESLYRYKGILYINGKRRKYIFQGVHMLFAAEEQAEWGDMSPRSE
HHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHEECHHCCCCCCCCCCC
IVFIGKDLNKQKLKEQFHKCISR
EEEEECCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 1650347 [H]