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The map label for this gene is ygbL [C]

Identifier: 23100709

GI number: 23100709

Start: 3390808

End: 3391452

Strand: Reverse

Name: ygbL [C]

Synonym: OB3254

Alternate gene names: 23100709

Gene position: 3391452-3390808 (Counterclockwise)

Preceding gene: 23100710

Following gene: 23100708

Centisome position: 93.41

GC content: 35.35

Gene sequence:

>645_bases
ATGGATAATCAGCTATTAAGTCAATTAAGCTCAACTGGAAAATTTATGATGGATAAAGACCTTGCCTGGGGTACTGCGGG
CAATATTAGTGCTAGATCTGGCGACGGGTATATCATTTCTGCTACCGGTACTTATTTAGGAGAATTAGAGGTGGAAGACT
TCTCTTTCTGTAAAGAAGGAGAGCATGTAGTAGGTAAAAAACCCTCGAAAGAATTTTTGATGCATGAGTGGATTTATGAA
GAAAGGCCGGAAATTAATGCTGTGTTACATGCATCTCCTTTCTACAGTACATTAATTGCTAATTCTGATATTGAACTTCC
GTCAAATTATTTTGTAGAATCTATGTATTATTTGGAGCGAATTACGAGAGTTCCATTTTATCATCCAGGGAGTAAGGAAT
TGGCACAAGCTGTAAAAGAAAGAGCGAAAGATGCGAATGTCTTTTTATTAGAGAATCATGGGATCATTGTCTGTGATGTC
AATTTAAAAGAGGCCCGTACAGCTTTACAAACATTAGAGTATACAGCACGTATGCATATTACTGCTTTGGAAAAGAATAT
TAATATAAATAGTTTAAGTGATGAAACAGTATATGATTTTCTTCATCATTCTGGATATAAACCTCTTCGCGATTGGAATA
AATAA

Upstream 100 bases:

>100_bases
TCTATATTGCTATTTTAATTAGCTTAATCGTTATAACATATATCCCTTCCATAACAATGAGCCTAGTGGAATGGATGAAA
TAAATAAAGGAAGTGAATAA

Downstream 100 bases:

>100_bases
AAATAGTAGAGTCATACTTTTATAGTGTGGCTCTATTTATTTTCGGGTATGTTACAACTAGAGGTGATAAGGTGAGACAT
ATAAAAGTAAATGTAAAAGG

Product: L-fuculose-phosphate aldolase

Products: glycerone phosphate; (S)-lactaldehyde

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MDNQLLSQLSSTGKFMMDKDLAWGTAGNISARSGDGYIISATGTYLGELEVEDFSFCKEGEHVVGKKPSKEFLMHEWIYE
ERPEINAVLHASPFYSTLIANSDIELPSNYFVESMYYLERITRVPFYHPGSKELAQAVKERAKDANVFLLENHGIIVCDV
NLKEARTALQTLEYTARMHITALEKNININSLSDETVYDFLHHSGYKPLRDWNK

Sequences:

>Translated_214_residues
MDNQLLSQLSSTGKFMMDKDLAWGTAGNISARSGDGYIISATGTYLGELEVEDFSFCKEGEHVVGKKPSKEFLMHEWIYE
ERPEINAVLHASPFYSTLIANSDIELPSNYFVESMYYLERITRVPFYHPGSKELAQAVKERAKDANVFLLENHGIIVCDV
NLKEARTALQTLEYTARMHITALEKNININSLSDETVYDFLHHSGYKPLRDWNK
>Mature_214_residues
MDNQLLSQLSSTGKFMMDKDLAWGTAGNISARSGDGYIISATGTYLGELEVEDFSFCKEGEHVVGKKPSKEFLMHEWIYE
ERPEINAVLHASPFYSTLIANSDIELPSNYFVESMYYLERITRVPFYHPGSKELAQAVKERAKDANVFLLENHGIIVCDV
NLKEARTALQTLEYTARMHITALEKNININSLSDETVYDFLHHSGYKPLRDWNK

Specific function: Unknown

COG id: COG0235

COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldolase class II family. AraD/FucA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789094, Length=186, Percent_Identity=32.7956989247312, Blast_Score=101, Evalue=4e-23,
Organism=Escherichia coli, GI1789164, Length=200, Percent_Identity=31.5, Blast_Score=99, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001303 [H]

Pfam domain/function: PF00596 Aldolase_II [H]

EC number: 4.1.2.17

Molecular weight: Translated: 24394; Mature: 24394

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNQLLSQLSSTGKFMMDKDLAWGTAGNISARSGDGYIISATGTYLGELEVEDFSFCKEG
CCHHHHHHHHHCCCEEEECCCCCCCCCCCEEECCCCEEEEECCCEEEEEECCHHHHHCCC
EHVVGKKPSKEFLMHEWIYEERPEINAVLHASPFYSTLIANSDIELPSNYFVESMYYLER
CCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHCCCCCCCCHHHHHHHHHHHHH
ITRVPFYHPGSKELAQAVKERAKDANVFLLENHGIIVCDVNLKEARTALQTLEYTARMHI
HHHCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCEEEEECCHHHHHHHHHHHHHHHHEEE
TALEKNININSLSDETVYDFLHHSGYKPLRDWNK
EEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MDNQLLSQLSSTGKFMMDKDLAWGTAGNISARSGDGYIISATGTYLGELEVEDFSFCKEG
CCHHHHHHHHHCCCEEEECCCCCCCCCCCEEECCCCEEEEECCCEEEEEECCHHHHHCCC
EHVVGKKPSKEFLMHEWIYEERPEINAVLHASPFYSTLIANSDIELPSNYFVESMYYLER
CCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHCCCCCCCCHHHHHHHHHHHHH
ITRVPFYHPGSKELAQAVKERAKDANVFLLENHGIIVCDVNLKEARTALQTLEYTARMHI
HHHCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCEEEEECCHHHHHHHHHHHHHHHHEEE
TALEKNININSLSDETVYDFLHHSGYKPLRDWNK
EEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: L-fuculose 1-phosphate

Specific reaction: L-fuculose 1-phosphate = glycerone phosphate + (S)-lactaldehyde

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]