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The map label for this gene is yfdE [H]

Identifier: 23100126

GI number: 23100126

Start: 2741448

End: 2742569

Strand: Reverse

Name: yfdE [H]

Synonym: OB2671

Alternate gene names: 23100126

Gene position: 2742569-2741448 (Counterclockwise)

Preceding gene: 23100127

Following gene: 23100125

Centisome position: 75.54

GC content: 37.7

Gene sequence:

>1122_bases
ATGCCGCTTTCCAATATAAGAGTTTTAGATTTAACAAGACTACTACCCGGTCCTTATTGTTCGATGATGCTAGCAGATTT
TGGAGCGGAGGTAATCAAGATAGAACAACCGAATGGTGGAGATTATCTACGTAATTTTGATCCTAAATACGGAAACGAAG
ATAGTGTTCTTTTCCAGTCAATAAATAGAAATAAAAAGAGTGTTTGTCTAGATTTGAAAGATGACGAGGATAGACAGAGC
TTTCTAGAATTACTAGCTAGTGCTGATATATTAATAGAATCTTTTCGTCCAGGAGTAATGAAAAATCTTGGTCTTGACTA
CGACACACTAAAAGAATATCAACCTAGTTTAATTTATTGTTCTTTAACTGGTTATGGCCAGACAGGACCATATAAAGACA
AAGCTGGACATGATATTAATTACTTAAGTACGGCAGGTATCCTTCAAATGATGAGTGATAATAAGAAAAAACCCGTATTA
CCATCTGTTCAAATGGCAGATATAGGAATGGGGGCTTATCCAGCAGTAATCGGAATTTTAATGGCGTATATTCATCGTCA
GAATACTGGAGTGGGCCAGTATATTGATGTCTCCATGTTAGATGGGGCGGTTTCCTGGCTCCATATGCTGTTACCTGCAA
CCTTTCATGGCCAGTCGATGAACCGAGAGAAATCACTGCTTTATGGTGGGTACGCATGTTATCAAATATACGAGACGAAA
GATCGCCGCTACTTGTCCATGGGCGGATTAGAAGATAAATTTTGGTCAACGTTTTGTAGAGTTATCGGTAAATATGAGTA
TGTATCACAATTACATGCTTCACTTGAGATTCAACGAGAAATGATTACCTCTATCCAACATGTCATCAAGAAAAAAACAT
TAGATGAATGGATGATTTTATTTGATGGGGAAGATGCATGTGTTACAGCATTACAAACCCTAGATGAGCTAGTAGTAGAT
CCACATGTTGCTTCCCGAGAAATGATTATTGATAAAGGGGGGATGAAACAAATCGGAATACCGATTAAGATGTCTGAAAC
CCCGGGAGAAATCCGGAGAACTTCGCCAACTCTTGGTGAACATAATGAAGAACTATTAAACCGAGCAAAAAAAATATATT
AA

Upstream 100 bases:

>100_bases
AGGTGGAAGATATGGTCTTCAAACGATGTGTGAAGGACATGGTATGGCAAACGCCACCATTATCGAAAGATTGGATTAAT
CGTATAAGAGGAGGAGCATT

Downstream 100 bases:

>100_bases
GTTTGGATGATGAGTTGTTCTAAAAATTAAAAAATGTAAAGGGGCCGATTGTTATGATGAACACGCAATTAACTCTAGCA
TCGATGATTAAACACACGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 372

Protein sequence:

>373_residues
MPLSNIRVLDLTRLLPGPYCSMMLADFGAEVIKIEQPNGGDYLRNFDPKYGNEDSVLFQSINRNKKSVCLDLKDDEDRQS
FLELLASADILIESFRPGVMKNLGLDYDTLKEYQPSLIYCSLTGYGQTGPYKDKAGHDINYLSTAGILQMMSDNKKKPVL
PSVQMADIGMGAYPAVIGILMAYIHRQNTGVGQYIDVSMLDGAVSWLHMLLPATFHGQSMNREKSLLYGGYACYQIYETK
DRRYLSMGGLEDKFWSTFCRVIGKYEYVSQLHASLEIQREMITSIQHVIKKKTLDEWMILFDGEDACVTALQTLDELVVD
PHVASREMIIDKGGMKQIGIPIKMSETPGEIRRTSPTLGEHNEELLNRAKKIY

Sequences:

>Translated_373_residues
MPLSNIRVLDLTRLLPGPYCSMMLADFGAEVIKIEQPNGGDYLRNFDPKYGNEDSVLFQSINRNKKSVCLDLKDDEDRQS
FLELLASADILIESFRPGVMKNLGLDYDTLKEYQPSLIYCSLTGYGQTGPYKDKAGHDINYLSTAGILQMMSDNKKKPVL
PSVQMADIGMGAYPAVIGILMAYIHRQNTGVGQYIDVSMLDGAVSWLHMLLPATFHGQSMNREKSLLYGGYACYQIYETK
DRRYLSMGGLEDKFWSTFCRVIGKYEYVSQLHASLEIQREMITSIQHVIKKKTLDEWMILFDGEDACVTALQTLDELVVD
PHVASREMIIDKGGMKQIGIPIKMSETPGEIRRTSPTLGEHNEELLNRAKKIY
>Mature_372_residues
PLSNIRVLDLTRLLPGPYCSMMLADFGAEVIKIEQPNGGDYLRNFDPKYGNEDSVLFQSINRNKKSVCLDLKDDEDRQSF
LELLASADILIESFRPGVMKNLGLDYDTLKEYQPSLIYCSLTGYGQTGPYKDKAGHDINYLSTAGILQMMSDNKKKPVLP
SVQMADIGMGAYPAVIGILMAYIHRQNTGVGQYIDVSMLDGAVSWLHMLLPATFHGQSMNREKSLLYGGYACYQIYETKD
RRYLSMGGLEDKFWSTFCRVIGKYEYVSQLHASLEIQREMITSIQHVIKKKTLDEWMILFDGEDACVTALQTLDELVVDP
HVASREMIIDKGGMKQIGIPIKMSETPGEIRRTSPTLGEHNEELLNRAKKIY

Specific function: Unknown

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=380, Percent_Identity=30.5263157894737, Blast_Score=214, Evalue=1e-55,
Organism=Homo sapiens, GI300863124, Length=328, Percent_Identity=31.7073170731707, Blast_Score=206, Evalue=4e-53,
Organism=Homo sapiens, GI42794625, Length=370, Percent_Identity=32.7027027027027, Blast_Score=200, Evalue=2e-51,
Organism=Homo sapiens, GI266456254, Length=370, Percent_Identity=32.7027027027027, Blast_Score=199, Evalue=2e-51,
Organism=Homo sapiens, GI300863126, Length=380, Percent_Identity=26.0526315789474, Blast_Score=166, Evalue=4e-41,
Organism=Homo sapiens, GI266458393, Length=290, Percent_Identity=32.4137931034483, Blast_Score=164, Evalue=9e-41,
Organism=Homo sapiens, GI13376042, Length=328, Percent_Identity=28.6585365853659, Blast_Score=162, Evalue=3e-40,
Organism=Homo sapiens, GI266458397, Length=273, Percent_Identity=34.0659340659341, Blast_Score=161, Evalue=8e-40,
Organism=Homo sapiens, GI42822893, Length=146, Percent_Identity=39.041095890411, Blast_Score=112, Evalue=7e-25,
Organism=Homo sapiens, GI266458395, Length=146, Percent_Identity=39.041095890411, Blast_Score=111, Evalue=1e-24,
Organism=Escherichia coli, GI87082093, Length=371, Percent_Identity=32.3450134770889, Blast_Score=193, Evalue=1e-50,
Organism=Escherichia coli, GI1788717, Length=397, Percent_Identity=26.7002518891688, Blast_Score=140, Evalue=2e-34,
Organism=Escherichia coli, GI1786222, Length=397, Percent_Identity=25.4408060453401, Blast_Score=84, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI32564160, Length=321, Percent_Identity=32.0872274143302, Blast_Score=173, Evalue=2e-43,
Organism=Caenorhabditis elegans, GI115535051, Length=355, Percent_Identity=32.112676056338, Blast_Score=167, Evalue=6e-42,
Organism=Drosophila melanogaster, GI24648431, Length=379, Percent_Identity=31.9261213720317, Blast_Score=200, Evalue=2e-51,
Organism=Drosophila melanogaster, GI24585488, Length=362, Percent_Identity=35.3591160220994, Blast_Score=197, Evalue=1e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: NA

Molecular weight: Translated: 42116; Mature: 41985

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLSNIRVLDLTRLLPGPYCSMMLADFGAEVIKIEQPNGGDYLRNFDPKYGNEDSVLFQS
CCCCCEEEEEHHHHCCCHHHHHHHHHCCCEEEEEECCCCCCHHCCCCCCCCCCHHHHHHH
INRNKKSVCLDLKDDEDRQSFLELLASADILIESFRPGVMKNLGLDYDTLKEYQPSLIYC
HCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHCCCCEEEE
SLTGYGQTGPYKDKAGHDINYLSTAGILQMMSDNKKKPVLPSVQMADIGMGAYPAVIGIL
EECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHHH
MAYIHRQNTGVGQYIDVSMLDGAVSWLHMLLPATFHGQSMNREKSLLYGGYACYQIYETK
HHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEECCEEEEEEEECC
DRRYLSMGGLEDKFWSTFCRVIGKYEYVSQLHASLEIQREMITSIQHVIKKKTLDEWMIL
CCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
FDGEDACVTALQTLDELVVDPHVASREMIIDKGGMKQIGIPIKMSETPGEIRRTSPTLGE
ECCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEECCEEEECCCCCHHHCCCCCCCC
HNEELLNRAKKIY
CHHHHHHHHHCCC
>Mature Secondary Structure 
PLSNIRVLDLTRLLPGPYCSMMLADFGAEVIKIEQPNGGDYLRNFDPKYGNEDSVLFQS
CCCCEEEEEHHHHCCCHHHHHHHHHCCCEEEEEECCCCCCHHCCCCCCCCCCHHHHHHH
INRNKKSVCLDLKDDEDRQSFLELLASADILIESFRPGVMKNLGLDYDTLKEYQPSLIYC
HCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHCCCCEEEE
SLTGYGQTGPYKDKAGHDINYLSTAGILQMMSDNKKKPVLPSVQMADIGMGAYPAVIGIL
EECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHHH
MAYIHRQNTGVGQYIDVSMLDGAVSWLHMLLPATFHGQSMNREKSLLYGGYACYQIYETK
HHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEECCEEEEEEEECC
DRRYLSMGGLEDKFWSTFCRVIGKYEYVSQLHASLEIQREMITSIQHVIKKKTLDEWMIL
CCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
FDGEDACVTALQTLDELVVDPHVASREMIIDKGGMKQIGIPIKMSETPGEIRRTSPTLGE
ECCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEECCEEEECCCCCHHHCCCCCCCC
HNEELLNRAKKIY
CHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 8125343 [H]