Click here to switch to the map view.

The map label for this gene is cycB [H]

Identifier: 23100015

GI number: 23100015

Start: 2616860

End: 2618137

Strand: Reverse

Name: cycB [H]

Synonym: OB2560

Alternate gene names: 23100015

Gene position: 2618137-2616860 (Counterclockwise)

Preceding gene: 23100017

Following gene: 23100014

Centisome position: 72.11

GC content: 36.78

Gene sequence:

>1278_bases
ATGAAGAAAAACTTGAGGTTTTTATTAATTGCAATTCTAGGCTTATCTATTTTGTTGGTTGCTTGTGCACCTGAACGAGA
CGAAGAAGCAGGTAGTGAAGGAGATAGCAGTGGAAAAGCTGCTGAAAAACCAGATGAATTAGTAATCTGGGTAAATGATC
AAGAAGAACAAATTGAAGCGATAGAGAATATTACTCAGAAGTTTGAAGAACAAGAAGGAATTCAAGTTAAATTAGAAACA
AAATCAATGCTTGATCAAATGCAAGAATTATCATTAGCTGGTCCAGAAGGAAATGGTCCAGACCTATTTTTTCAGCCTCA
TGACCGTATTGGAAATATTGTTGCTCAAGGTTTAGCAGAGCCTGTAGACCTGACAGATGAACAATTAAATGAGTATGTAG
ATACTGCAGTAGAAGCAGTTACGTATACGTATGATGGAAATACAAACATTTATGGAATACCTGCAGTAATTGAGACTTAT
GGGATTTTTTACAATAAAGCATTACAAGAAGAAGCTCCTGAAACAATTGAAGATTTACTTACAGTTCTAGAAGAAAATTC
AAATCCTTCAGAAGATCAATTTGGATTTTTAATGCGTCCAAATGACTTATATTTTAATTTTCCATTCTTTAAAAATTATG
GCGCTTATATCTTTGGAGGAGATACTGGGAACTATGATATAGAAGACATTGGGTTAGCAAATGATGGTGCAATTGAGGGA
GCAGAATTGTATCAATCCTTCTTTGGAGAAGGTAAGATTCCGACCTCAACTACTGGTGATGTAATCGATGGATTATTTAC
AGAAGGAAAAGTTGGTTCAGTAATTAGTGGTCCATGGAGCGTTCCTGGCTATAAGGAAGCGTTAGGTGAAGATTTAGGAT
TCGCACCATTTCCTATGATTAATGATCAACCAACAGAAACGTTTGTTGGTGTGAAATCTTGGATGGTATCTTATTACTCT
GAGAATAAAGAGTGGGCAAAAGAATTAGCGGTATTTATGACGAATGAAGAAAATCAAGGTGAGTATTTTGAGATTGCAGG
GGAATTACCGCCAAATGCAAAAGCTTTAAGTAATATAGAAGACCCGATTTATGCTGCATTTGCTGAGCAGATTGAACATG
GGTTTCCTATGCCAAGTGCTCCAGAGATGGCACAAGTTTGGGAGCCGATGAATAATGCTTTACAATTCCTGGCTGAAGGA
GAAGATCCTAAAACAGTACTGGAAGAAGCACTAGAACAGGTTCAAACAAATATTGATGCAAGTGGTGGCAGTAACTAG

Upstream 100 bases:

>100_bases
GGTTTCGTATAAAATTAAATTGTAAACAATGTGCAACCGGTTGCGCAAACGTATAATACGGAGTCGTACATTGGATTAAA
CAATAATAGGGGGAGTACGA

Downstream 100 bases:

>100_bases
AGGTTGAGAAAAAGTATTTACTTATAGGTGAATAGGTATTGAAAATCCCGCTTCAGAAATATACTGCTCTTATTCTAAGG
CGGCTGGTGAGCCTCCGGAT

Product: maltose:maltodextrin transport system maltose:maltodextrin-binding protein

Products: ADP; phosphate; maltose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MKKNLRFLLIAILGLSILLVACAPERDEEAGSEGDSSGKAAEKPDELVIWVNDQEEQIEAIENITQKFEEQEGIQVKLET
KSMLDQMQELSLAGPEGNGPDLFFQPHDRIGNIVAQGLAEPVDLTDEQLNEYVDTAVEAVTYTYDGNTNIYGIPAVIETY
GIFYNKALQEEAPETIEDLLTVLEENSNPSEDQFGFLMRPNDLYFNFPFFKNYGAYIFGGDTGNYDIEDIGLANDGAIEG
AELYQSFFGEGKIPTSTTGDVIDGLFTEGKVGSVISGPWSVPGYKEALGEDLGFAPFPMINDQPTETFVGVKSWMVSYYS
ENKEWAKELAVFMTNEENQGEYFEIAGELPPNAKALSNIEDPIYAAFAEQIEHGFPMPSAPEMAQVWEPMNNALQFLAEG
EDPKTVLEEALEQVQTNIDASGGSN

Sequences:

>Translated_425_residues
MKKNLRFLLIAILGLSILLVACAPERDEEAGSEGDSSGKAAEKPDELVIWVNDQEEQIEAIENITQKFEEQEGIQVKLET
KSMLDQMQELSLAGPEGNGPDLFFQPHDRIGNIVAQGLAEPVDLTDEQLNEYVDTAVEAVTYTYDGNTNIYGIPAVIETY
GIFYNKALQEEAPETIEDLLTVLEENSNPSEDQFGFLMRPNDLYFNFPFFKNYGAYIFGGDTGNYDIEDIGLANDGAIEG
AELYQSFFGEGKIPTSTTGDVIDGLFTEGKVGSVISGPWSVPGYKEALGEDLGFAPFPMINDQPTETFVGVKSWMVSYYS
ENKEWAKELAVFMTNEENQGEYFEIAGELPPNAKALSNIEDPIYAAFAEQIEHGFPMPSAPEMAQVWEPMNNALQFLAEG
EDPKTVLEEALEQVQTNIDASGGSN
>Mature_425_residues
MKKNLRFLLIAILGLSILLVACAPERDEEAGSEGDSSGKAAEKPDELVIWVNDQEEQIEAIENITQKFEEQEGIQVKLET
KSMLDQMQELSLAGPEGNGPDLFFQPHDRIGNIVAQGLAEPVDLTDEQLNEYVDTAVEAVTYTYDGNTNIYGIPAVIETY
GIFYNKALQEEAPETIEDLLTVLEENSNPSEDQFGFLMRPNDLYFNFPFFKNYGAYIFGGDTGNYDIEDIGLANDGAIEG
AELYQSFFGEGKIPTSTTGDVIDGLFTEGKVGSVISGPWSVPGYKEALGEDLGFAPFPMINDQPTETFVGVKSWMVSYYS
ENKEWAKELAVFMTNEENQGEYFEIAGELPPNAKALSNIEDPIYAAFAEQIEHGFPMPSAPEMAQVWEPMNNALQFLAEG
EDPKTVLEEALEQVQTNIDASGGSN

Specific function: Binding protein for cyclodextrin; involved in its cellular uptake. Interacts with all natural cyclodextrins:alpha, beta and gamma [H]

COG id: COG2182

COG function: function code G; Maltose-binding periplasmic proteins/domains

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

Organism=Escherichia coli, GI1790466, Length=380, Percent_Identity=28.6842105263158, Blast_Score=135, Evalue=4e-33,

Paralogues:

None

Copy number: 660 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 720 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase,

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006060
- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 46861; Mature: 46861

Theoretical pI: Translated: 3.66; Mature: 3.66

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNLRFLLIAILGLSILLVACAPERDEEAGSEGDSSGKAAEKPDELVIWVNDQEEQIEA
CCCCHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCEEEEECCCHHHHHH
IENITQKFEEQEGIQVKLETKSMLDQMQELSLAGPEGNGPDLFFQPHDRIGNIVAQGLAE
HHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHHHCCC
PVDLTDEQLNEYVDTAVEAVTYTYDGNTNIYGIPAVIETYGIFYNKALQEEAPETIEDLL
CCCCCHHHHHHHHHHHHHHEEEEECCCCCEEECHHHHHHHHHHHHHHHHHHCHHHHHHHH
TVLEENSNPSEDQFGFLMRPNDLYFNFPFFKNYGAYIFGGDTGNYDIEDIGLANDGAIEG
HHHHCCCCCCHHHCEEEECCCCEEEECCHHHCCCCEEECCCCCCCCHHCCCCCCCCCCCH
AELYQSFFGEGKIPTSTTGDVIDGLFTEGKVGSVISGPWSVPGYKEALGEDLGFAPFPMI
HHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCC
NDQPTETFVGVKSWMVSYYSENKEWAKELAVFMTNEENQGEYFEIAGELPPNAKALSNIE
CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHCCC
DPIYAAFAEQIEHGFPMPSAPEMAQVWEPMNNALQFLAEGEDPKTVLEEALEQVQTNIDA
CHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
SGGSN
CCCCC
>Mature Secondary Structure
MKKNLRFLLIAILGLSILLVACAPERDEEAGSEGDSSGKAAEKPDELVIWVNDQEEQIEA
CCCCHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCEEEEECCCHHHHHH
IENITQKFEEQEGIQVKLETKSMLDQMQELSLAGPEGNGPDLFFQPHDRIGNIVAQGLAE
HHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHHHCCC
PVDLTDEQLNEYVDTAVEAVTYTYDGNTNIYGIPAVIETYGIFYNKALQEEAPETIEDLL
CCCCCHHHHHHHHHHHHHHEEEEECCCCCEEECHHHHHHHHHHHHHHHHHHCHHHHHHHH
TVLEENSNPSEDQFGFLMRPNDLYFNFPFFKNYGAYIFGGDTGNYDIEDIGLANDGAIEG
HHHHCCCCCCHHHCEEEECCCCEEEECCHHHCCCCEEECCCCCCCCHHCCCCCCCCCCCH
AELYQSFFGEGKIPTSTTGDVIDGLFTEGKVGSVISGPWSVPGYKEALGEDLGFAPFPMI
HHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCC
NDQPTETFVGVKSWMVSYYSENKEWAKELAVFMTNEENQGEYFEIAGELPPNAKALSNIE
CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHCCC
DPIYAAFAEQIEHGFPMPSAPEMAQVWEPMNNALQFLAEGEDPKTVLEEALEQVQTNIDA
CHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
SGGSN
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; maltose [Periplasm]; H2O [C]

Specific reaction: ATP + maltose [Periplasm] + H2O = ADP + phosphate + maltose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]