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The map label for this gene is dppC [H]

Identifier: 23099904

GI number: 23099904

Start: 2505449

End: 2506372

Strand: Reverse

Name: dppC [H]

Synonym: OB2449

Alternate gene names: 23099904

Gene position: 2506372-2505449 (Counterclockwise)

Preceding gene: 23099905

Following gene: 23099902

Centisome position: 69.04

GC content: 37.34

Gene sequence:

>924_bases
ATGAAGAGCAAACATTCACATGCAGAACAGCAAACTGCTGATCCATCTCTTGTAAGTCAATTACAACAAGATCATATAGA
AGAAATTAGCCCTTGGAAGGAGACGCTTTCTAGTTTATTTAAAAGTCGTTTAGCTATAGTTGGTATTATTATCCTGTTTT
TATTTTTAGTAATTGCAATTATAGGTCCCTTACTGACACCTTATGATTATGCAGAACAAGACCTTACCAATAGACTTCAG
TCCCCATCAAGTGAACATTTACTCGGTACAGATCATATTGGTCGAGATATAGCTACTCGAATTATTTATGGGGCCTCTGT
TTCACTGCAAGTAGGATTTTATGCTGTTACAGGGGCACTTCTCTTTGGTACATTACTTGGTATTATTGCAGGATTCTTCG
GGAAATGGGTGGATATGATCATATCTCGAATGTTTGATATTTTACTTGCTTTTCCTAGTATTTTATTAGCTATTGCGATA
GTAGCTATACTTGGACCATCTTTAGAAAATGCATTAGTAGCTATTGCCATTGTTAACATACCCATTTTCGGTAGATTAGT
AAGGTCCAAAGTAATTAGTTTACGAGAAGAAGAATACATTATGGCGGCACGTGCTCAAGGAATGAAGAATGGAAGGATCA
TTTTTCAACATATATTGCCGAATAGTACGGCTCCTATTATCGTACAAGCTACGTTGAGTTTTGGTACTGCAATTATAGAA
GCTGCCGCTTTAGGATTTCTTGGCTTGGGTGCACAACATCCTACTCCAGAATGGGGAAGAATGCTTGCTGATGGCAGAGC
ATTTCTTCAGTTAGCACCGTGGACTTTAATTGCACCCGGTTTATGTATAATGTTAGTTGTTTTAGCTTTTAATTTAATTG
GAGATGGCTTACGAGATGCATTGGATCCAAAGATGAAACATTAG

Upstream 100 bases:

>100_bases
TTTAGTGATTGCATTTTTATTTGTCATTATTAATCTAATTGTAGATATTTTGTACAAGAAAATTGATCCAAGGATTAATT
ATTAAGGGGGATGGAAAATA

Downstream 100 bases:

>100_bases
AAGTTAGAGTCGGAGTGCAAGAACGGATTTATTAAGACACTGGTAAATAAAAAAATATGCGCTACTTCAAATAAGCAGAA
AATGAGATCTTAGAGTTTTT

Product: dipeptide ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MKSKHSHAEQQTADPSLVSQLQQDHIEEISPWKETLSSLFKSRLAIVGIIILFLFLVIAIIGPLLTPYDYAEQDLTNRLQ
SPSSEHLLGTDHIGRDIATRIIYGASVSLQVGFYAVTGALLFGTLLGIIAGFFGKWVDMIISRMFDILLAFPSILLAIAI
VAILGPSLENALVAIAIVNIPIFGRLVRSKVISLREEEYIMAARAQGMKNGRIIFQHILPNSTAPIIVQATLSFGTAIIE
AAALGFLGLGAQHPTPEWGRMLADGRAFLQLAPWTLIAPGLCIMLVVLAFNLIGDGLRDALDPKMKH

Sequences:

>Translated_307_residues
MKSKHSHAEQQTADPSLVSQLQQDHIEEISPWKETLSSLFKSRLAIVGIIILFLFLVIAIIGPLLTPYDYAEQDLTNRLQ
SPSSEHLLGTDHIGRDIATRIIYGASVSLQVGFYAVTGALLFGTLLGIIAGFFGKWVDMIISRMFDILLAFPSILLAIAI
VAILGPSLENALVAIAIVNIPIFGRLVRSKVISLREEEYIMAARAQGMKNGRIIFQHILPNSTAPIIVQATLSFGTAIIE
AAALGFLGLGAQHPTPEWGRMLADGRAFLQLAPWTLIAPGLCIMLVVLAFNLIGDGLRDALDPKMKH
>Mature_307_residues
MKSKHSHAEQQTADPSLVSQLQQDHIEEISPWKETLSSLFKSRLAIVGIIILFLFLVIAIIGPLLTPYDYAEQDLTNRLQ
SPSSEHLLGTDHIGRDIATRIIYGASVSLQVGFYAVTGALLFGTLLGIIAGFFGKWVDMIISRMFDILLAFPSILLAIAI
VAILGPSLENALVAIAIVNIPIFGRLVRSKVISLREEEYIMAARAQGMKNGRIIFQHILPNSTAPIIVQATLSFGTAIIE
AAALGFLGLGAQHPTPEWGRMLADGRAFLQLAPWTLIAPGLCIMLVVLAFNLIGDGLRDALDPKMKH

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=279, Percent_Identity=46.2365591397849, Blast_Score=252, Evalue=2e-68,
Organism=Escherichia coli, GI1787760, Length=289, Percent_Identity=42.560553633218, Blast_Score=228, Evalue=3e-61,
Organism=Escherichia coli, GI1789964, Length=300, Percent_Identity=46.6666666666667, Blast_Score=216, Evalue=2e-57,
Organism=Escherichia coli, GI1789889, Length=239, Percent_Identity=39.7489539748954, Blast_Score=180, Evalue=1e-46,
Organism=Escherichia coli, GI1787549, Length=278, Percent_Identity=37.0503597122302, Blast_Score=172, Evalue=3e-44,
Organism=Escherichia coli, GI1787498, Length=285, Percent_Identity=35.0877192982456, Blast_Score=169, Evalue=2e-43,
Organism=Escherichia coli, GI1788505, Length=275, Percent_Identity=28.3636363636364, Blast_Score=109, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33382; Mature: 33382

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSKHSHAEQQTADPSLVSQLQQDHIEEISPWKETLSSLFKSRLAIVGIIILFLFLVIAI
CCCCCHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGPLLTPYDYAEQDLTNRLQSPSSEHLLGTDHIGRDIATRIIYGASVSLQVGFYAVTGAL
HHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHH
LFGTLLGIIAGFFGKWVDMIISRMFDILLAFPSILLAIAIVAILGPSLENALVAIAIVNI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
PIFGRLVRSKVISLREEEYIMAARAQGMKNGRIIFQHILPNSTAPIIVQATLSFGTAIIE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEEHHHHHHHHHH
AAALGFLGLGAQHPTPEWGRMLADGRAFLQLAPWTLIAPGLCIMLVVLAFNLIGDGLRDA
HHHHHHHHCCCCCCCCHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDPKMKH
CCCCCCC
>Mature Secondary Structure
MKSKHSHAEQQTADPSLVSQLQQDHIEEISPWKETLSSLFKSRLAIVGIIILFLFLVIAI
CCCCCHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGPLLTPYDYAEQDLTNRLQSPSSEHLLGTDHIGRDIATRIIYGASVSLQVGFYAVTGAL
HHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHH
LFGTLLGIIAGFFGKWVDMIISRMFDILLAFPSILLAIAIVAILGPSLENALVAIAIVNI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
PIFGRLVRSKVISLREEEYIMAARAQGMKNGRIIFQHILPNSTAPIIVQATLSFGTAIIE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEEHHHHHHHHHH
AAALGFLGLGAQHPTPEWGRMLADGRAFLQLAPWTLIAPGLCIMLVVLAFNLIGDGLRDA
HHHHHHHHCCCCCCCCHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDPKMKH
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]