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The map label for this gene is ysdA [H]

Identifier: 23099604

GI number: 23099604

Start: 2181670

End: 2181948

Strand: Reverse

Name: ysdA [H]

Synonym: OB2149

Alternate gene names: 23099604

Gene position: 2181948-2181670 (Counterclockwise)

Preceding gene: 23099605

Following gene: 23099603

Centisome position: 60.1

GC content: 35.48

Gene sequence:

>279_bases
ATGGAAGAATCGGGTAGTTTGTTATATTATTTAGTGGCAGCGAATATTATAGGCTTTGTAATCATGTACATCGATAAAAG
GAAGGCTGTACGAGGGCATTATCGAATTCCTGAAAGAACGTTTTGGCTACTCGGAATCCTTGGTGCAAGTGTTGGTATAT
ATTTAGGTATGCAAACATTTCGACATAAAACGAAACATCGATCTTTTACCATTGGCATACCTGTCCTTATTGTTATTAAT
GTGATTAGTTTTAGCTGGATTCTACTTTTCATGTCATAA

Upstream 100 bases:

>100_bases
GTTAAAATAAATAACTAGAAAAGGCCGAATCCGAGTAGGATCGGTCTTTTTTTAAACAAATAGGTGGTAATTCTACAAAA
ATAGGAGTGTGAAATGCGAA

Downstream 100 bases:

>100_bases
AGGCTCGTCTACTGTCATATAGATATATGGAACTTTGTATAATGAATAGAAACGACAAAGGAGGTGGAGGATGGAATATA
TAGGAAATTATTTATTTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 92; Mature: 92

Protein sequence:

>92_residues
MEESGSLLYYLVAANIIGFVIMYIDKRKAVRGHYRIPERTFWLLGILGASVGIYLGMQTFRHKTKHRSFTIGIPVLIVIN
VISFSWILLFMS

Sequences:

>Translated_92_residues
MEESGSLLYYLVAANIIGFVIMYIDKRKAVRGHYRIPERTFWLLGILGASVGIYLGMQTFRHKTKHRSFTIGIPVLIVIN
VISFSWILLFMS
>Mature_92_residues
MEESGSLLYYLVAANIIGFVIMYIDKRKAVRGHYRIPERTFWLLGILGASVGIYLGMQTFRHKTKHRSFTIGIPVLIVIN
VISFSWILLFMS

Specific function: Unknown

COG id: COG3326

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010718 [H]

Pfam domain/function: PF06961 DUF1294 [H]

EC number: NA

Molecular weight: Translated: 10580; Mature: 10580

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEESGSLLYYLVAANIIGFVIMYIDKRKAVRGHYRIPERTFWLLGILGASVGIYLGMQTF
CCCCCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RHKTKHRSFTIGIPVLIVINVISFSWILLFMS
HHHHHCCEEEECHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEESGSLLYYLVAANIIGFVIMYIDKRKAVRGHYRIPERTFWLLGILGASVGIYLGMQTF
CCCCCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RHKTKHRSFTIGIPVLIVINVISFSWILLFMS
HHHHHCCEEEECHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]