Click here to switch to the map view.

The map label for this gene is ydjX [C]

Identifier: 23099603

GI number: 23099603

Start: 2180991

End: 2181599

Strand: Reverse

Name: ydjX [C]

Synonym: OB2148

Alternate gene names: 23099603

Gene position: 2181599-2180991 (Counterclockwise)

Preceding gene: 23099604

Following gene: 23099602

Centisome position: 60.09

GC content: 31.86

Gene sequence:

>609_bases
ATGGAATATATAGGAAATTATTTATTTTCTATAGTTGAAATGGGTGGAGTTCTCTCACCGCTTTTATTTATTATATTTCA
TTTATTTAGACCGTTGTTATTCTTACCCGTTGTATTTATATGTATTTCAGGTGGAGTATTGTTTGGACCTGTAGCAGGAT
CAATTTATTCAATTATAGGTATAACACTTTCAAGCTTACTATTCTATGGCTTAATGGGATGGACGCCAAAATCTGTTCAA
CGTTTGATTGGAATAAAGCAAAAATTGTTAGGTAAACACGTGGAATTGACAAAATCCCAGATTACCTTATTACGATTAGT
TCCTTTTATACATTTCCATCTGTTATCTCTATGTCTTATCGAAATAAGTAATGGATTTAAAGATTATGCACGATCATCTA
TGTTCTCAAGCATACCATTAGCTATGGTGTACACCTCAATAGGAGGCTGGATTTCTAATTTGAATCCAATATTTATTGGA
ATATTGTTAGTTGCTTTACTACCCATGTTATATCTACTAAGAAGAAAAGAAATCATTATCAAATGGCAAGAATTTTTCTC
CGCACAAGACTCTCAACAACACACTTCATTATATCGTTCTCCTTCTTAA

Upstream 100 bases:

>100_bases
TTTAGCTGGATTCTACTTTTCATGTCATAAAGGCTCGTCTACTGTCATATAGATATATGGAACTTTGTATAATGAATAGA
AACGACAAAGGAGGTGGAGG

Downstream 100 bases:

>100_bases
ACACACGTGAATCTACGTGTGTTTTTTGTTATAGTGGATGTATACTTATATAAGTTGGAAGTGGTTGGGTGGAATTAGAA
TTAATATTAGATATGATAAA

Product: hypothetical protein

Products: NA

Alternate protein names: SNARE Associated Golgi Protein-Like Protein

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MEYIGNYLFSIVEMGGVLSPLLFIIFHLFRPLLFLPVVFICISGGVLFGPVAGSIYSIIGITLSSLLFYGLMGWTPKSVQ
RLIGIKQKLLGKHVELTKSQITLLRLVPFIHFHLLSLCLIEISNGFKDYARSSMFSSIPLAMVYTSIGGWISNLNPIFIG
ILLVALLPMLYLLRRKEIIIKWQEFFSAQDSQQHTSLYRSPS

Sequences:

>Translated_202_residues
MEYIGNYLFSIVEMGGVLSPLLFIIFHLFRPLLFLPVVFICISGGVLFGPVAGSIYSIIGITLSSLLFYGLMGWTPKSVQ
RLIGIKQKLLGKHVELTKSQITLLRLVPFIHFHLLSLCLIEISNGFKDYARSSMFSSIPLAMVYTSIGGWISNLNPIFIG
ILLVALLPMLYLLRRKEIIIKWQEFFSAQDSQQHTSLYRSPS
>Mature_202_residues
MEYIGNYLFSIVEMGGVLSPLLFIIFHLFRPLLFLPVVFICISGGVLFGPVAGSIYSIIGITLSSLLFYGLMGWTPKSVQ
RLIGIKQKLLGKHVELTKSQITLLRLVPFIHFHLLSLCLIEISNGFKDYARSSMFSSIPLAMVYTSIGGWISNLNPIFIG
ILLVALLPMLYLLRRKEIIIKWQEFFSAQDSQQHTSLYRSPS

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22775; Mature: 22775

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: PS00267 TACHYKININ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYIGNYLFSIVEMGGVLSPLLFIIFHLFRPLLFLPVVFICISGGVLFGPVAGSIYSIIG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
ITLSSLLFYGLMGWTPKSVQRLIGIKQKLLGKHVELTKSQITLLRLVPFIHFHLLSLCLI
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EISNGFKDYARSSMFSSIPLAMVYTSIGGWISNLNPIFIGILLVALLPMLYLLRRKEIII
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KWQEFFSAQDSQQHTSLYRSPS
HHHHHHCCCCCHHHHHHHCCCC
>Mature Secondary Structure
MEYIGNYLFSIVEMGGVLSPLLFIIFHLFRPLLFLPVVFICISGGVLFGPVAGSIYSIIG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
ITLSSLLFYGLMGWTPKSVQRLIGIKQKLLGKHVELTKSQITLLRLVPFIHFHLLSLCLI
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EISNGFKDYARSSMFSSIPLAMVYTSIGGWISNLNPIFIGILLVALLPMLYLLRRKEIII
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KWQEFFSAQDSQQHTSLYRSPS
HHHHHHCCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA