Definition | Oceanobacillus iheyensis HTE831, complete genome. |
---|---|
Accession | NC_004193 |
Length | 3,630,528 |
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The map label for this gene is fadB [H]
Identifier: 23099575
GI number: 23099575
Start: 2153644
End: 2154417
Strand: Reverse
Name: fadB [H]
Synonym: OB2120
Alternate gene names: 23099575
Gene position: 2154417-2153644 (Counterclockwise)
Preceding gene: 23099576
Following gene: 23099574
Centisome position: 59.34
GC content: 37.98
Gene sequence:
>774_bases TTGACGTTAATAGCTTTTGAATTAAAAGATCAAGTTGCCTGTTTGACTATTCAAAGTCCACCTGCCAATGCGTTATCAGG GGCAATATTGAAACAACTCAATGAACGACTTAATCAAATAGAAGAAGAAGGTAAAGCGAAGGCAGTTGTTATTTCGGGTG AAGGTAGATTCTTCTCTGCTGGAGCAGATATTAAAGAATTCACTGGATATCAACATGCATCTGAATATGAATCTCTTGCC AATAATGGGCAAAACGTATTTGATCGTGTAGAACATTTTTCTATCCCTGTAATTGCAGCTATACATGGAGCTGCGCTTGG TGGGGGTCTTGAACTTGCAATGTCATGTCATATTCGATTAGTTACTGAGAATACAAAGTTAGGATTACCAGAAATGAATT TGGGTATCATTCCTGGTTTTGCAGGAACTCAACGTTTACCACGACTTATCGGGAATGCACGAGCTTATGAAATGATATTA ACAGGGGAACCAATAAGTGGACAGCAGGCTGCTGATTGGGGATTGGCGAATCATGTAGTTCCAGAAGAAGAATTGCTGCA AAAAGCAATGAACATTGCGAATAAAATTACTATGAAAAGTAAGCCTGGTATTTCAGAGATAATGCATTTAGTTCCATATG CAAATAAAGATCAACTCTCAAAAGGTGTAAAGGAAGAAGCAAAGTCTTTTGGCAGGGTATTTGGGTCTGAAGATGCAAAA GAAGGTGTCACAGCATTTATTGAAAAACGAGAACCAAATTTCCAAGATAAATAG
Upstream 100 bases:
>100_bases AAAATATAATTTGATTCGTATGGTTCCTGAGGCACATGCATTAATAATTGGTGCCTTAGTATATGAATCTTAATATTAAA AGGGAGAAGAGGTGCCAACA
Downstream 100 bases:
>100_bases ATTCGTAGTTTAGGAGGAAGTTAAATGAATATATATGTACTTTTAAAGAAAACTTTTGATACAGAAGAAAAAATTACTGT TTCAGGCGGTAGAATTGAAG
Product: enoyl-CoA hydratase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MTLIAFELKDQVACLTIQSPPANALSGAILKQLNERLNQIEEEGKAKAVVISGEGRFFSAGADIKEFTGYQHASEYESLA NNGQNVFDRVEHFSIPVIAAIHGAALGGGLELAMSCHIRLVTENTKLGLPEMNLGIIPGFAGTQRLPRLIGNARAYEMIL TGEPISGQQAADWGLANHVVPEEELLQKAMNIANKITMKSKPGISEIMHLVPYANKDQLSKGVKEEAKSFGRVFGSEDAK EGVTAFIEKREPNFQDK
Sequences:
>Translated_257_residues MTLIAFELKDQVACLTIQSPPANALSGAILKQLNERLNQIEEEGKAKAVVISGEGRFFSAGADIKEFTGYQHASEYESLA NNGQNVFDRVEHFSIPVIAAIHGAALGGGLELAMSCHIRLVTENTKLGLPEMNLGIIPGFAGTQRLPRLIGNARAYEMIL TGEPISGQQAADWGLANHVVPEEELLQKAMNIANKITMKSKPGISEIMHLVPYANKDQLSKGVKEEAKSFGRVFGSEDAK EGVTAFIEKREPNFQDK >Mature_256_residues TLIAFELKDQVACLTIQSPPANALSGAILKQLNERLNQIEEEGKAKAVVISGEGRFFSAGADIKEFTGYQHASEYESLAN NGQNVFDRVEHFSIPVIAAIHGAALGGGLELAMSCHIRLVTENTKLGLPEMNLGIIPGFAGTQRLPRLIGNARAYEMILT GEPISGQQAADWGLANHVVPEEELLQKAMNIANKITMKSKPGISEIMHLVPYANKDQLSKGVKEEAKSFGRVFGSEDAKE GVTAFIEKREPNFQDK
Specific function: Involved in the degradation of long-chain fatty acids [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=249, Percent_Identity=39.3574297188755, Blast_Score=171, Evalue=7e-43, Organism=Homo sapiens, GI31542718, Length=236, Percent_Identity=33.4745762711864, Blast_Score=125, Evalue=3e-29, Organism=Homo sapiens, GI20127408, Length=254, Percent_Identity=33.0708661417323, Blast_Score=125, Evalue=4e-29, Organism=Homo sapiens, GI68989263, Length=192, Percent_Identity=36.9791666666667, Blast_Score=124, Evalue=1e-28, Organism=Homo sapiens, GI4502327, Length=238, Percent_Identity=32.7731092436975, Blast_Score=105, Evalue=3e-23, Organism=Homo sapiens, GI70995211, Length=241, Percent_Identity=26.9709543568465, Blast_Score=100, Evalue=1e-21, Organism=Homo sapiens, GI213417737, Length=170, Percent_Identity=27.6470588235294, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI157694516, Length=170, Percent_Identity=27.6470588235294, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI62530384, Length=242, Percent_Identity=27.2727272727273, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI150378541, Length=240, Percent_Identity=29.5833333333333, Blast_Score=82, Evalue=6e-16, Organism=Homo sapiens, GI37594471, Length=192, Percent_Identity=30.2083333333333, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI37594469, Length=192, Percent_Identity=30.2083333333333, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI261878539, Length=94, Percent_Identity=41.4893617021277, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI157694520, Length=152, Percent_Identity=26.3157894736842, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI221136756, Length=244, Percent_Identity=22.5409836065574, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI221136753, Length=244, Percent_Identity=22.5409836065574, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI221307494, Length=244, Percent_Identity=22.5409836065574, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI25453481, Length=244, Percent_Identity=21.3114754098361, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI51538573, Length=244, Percent_Identity=21.3114754098361, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI4757968, Length=244, Percent_Identity=21.3114754098361, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI49355787, Length=244, Percent_Identity=21.3114754098361, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI295842266, Length=240, Percent_Identity=25, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI116235487, Length=179, Percent_Identity=25.1396648044693, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI4757966, Length=226, Percent_Identity=21.6814159292035, Blast_Score=65, Evalue=5e-11, Organism=Homo sapiens, GI51538581, Length=226, Percent_Identity=21.6814159292035, Blast_Score=65, Evalue=5e-11, Organism=Escherichia coli, GI1787659, Length=250, Percent_Identity=36.4, Blast_Score=167, Evalue=4e-43, Organism=Escherichia coli, GI1788682, Length=198, Percent_Identity=44.4444444444444, Blast_Score=152, Evalue=1e-38, Organism=Escherichia coli, GI1790281, Length=194, Percent_Identity=36.0824742268041, Blast_Score=121, Evalue=6e-29, Organism=Escherichia coli, GI221142681, Length=249, Percent_Identity=30.1204819277108, Blast_Score=120, Evalue=8e-29, Organism=Escherichia coli, GI1787660, Length=263, Percent_Identity=30.0380228136882, Blast_Score=97, Evalue=8e-22, Organism=Escherichia coli, GI87082183, Length=236, Percent_Identity=29.2372881355932, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI1788597, Length=254, Percent_Identity=26.3779527559055, Blast_Score=83, Evalue=2e-17, Organism=Caenorhabditis elegans, GI25145438, Length=246, Percent_Identity=35.7723577235772, Blast_Score=164, Evalue=5e-41, Organism=Caenorhabditis elegans, GI17554946, Length=251, Percent_Identity=37.0517928286853, Blast_Score=156, Evalue=8e-39, Organism=Caenorhabditis elegans, GI17540714, Length=175, Percent_Identity=40, Blast_Score=126, Evalue=1e-29, Organism=Caenorhabditis elegans, GI17558304, Length=179, Percent_Identity=37.4301675977654, Blast_Score=121, Evalue=3e-28, Organism=Caenorhabditis elegans, GI25144276, Length=179, Percent_Identity=36.8715083798883, Blast_Score=113, Evalue=1e-25, Organism=Caenorhabditis elegans, GI17508951, Length=179, Percent_Identity=36.8715083798883, Blast_Score=112, Evalue=1e-25, Organism=Caenorhabditis elegans, GI17508953, Length=179, Percent_Identity=36.8715083798883, Blast_Score=112, Evalue=1e-25, Organism=Caenorhabditis elegans, GI17540306, Length=264, Percent_Identity=28.4090909090909, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17560910, Length=234, Percent_Identity=29.9145299145299, Blast_Score=102, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17534483, Length=245, Percent_Identity=25.3061224489796, Blast_Score=101, Evalue=3e-22, Organism=Caenorhabditis elegans, GI25144160, Length=195, Percent_Identity=28.2051282051282, Blast_Score=70, Evalue=7e-13, Organism=Caenorhabditis elegans, GI25144157, Length=195, Percent_Identity=28.2051282051282, Blast_Score=70, Evalue=8e-13, Organism=Caenorhabditis elegans, GI25141363, Length=193, Percent_Identity=26.4248704663212, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17535521, Length=233, Percent_Identity=24.0343347639485, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17549921, Length=252, Percent_Identity=23.015873015873, Blast_Score=66, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6320241, Length=200, Percent_Identity=28, Blast_Score=86, Evalue=4e-18, Organism=Drosophila melanogaster, GI20129971, Length=257, Percent_Identity=39.6887159533074, Blast_Score=173, Evalue=1e-43, Organism=Drosophila melanogaster, GI24653477, Length=257, Percent_Identity=39.6887159533074, Blast_Score=173, Evalue=1e-43, Organism=Drosophila melanogaster, GI24653139, Length=252, Percent_Identity=35.3174603174603, Blast_Score=146, Evalue=1e-35, Organism=Drosophila melanogaster, GI19921000, Length=174, Percent_Identity=39.6551724137931, Blast_Score=102, Evalue=2e-22, Organism=Drosophila melanogaster, GI24583077, Length=174, Percent_Identity=39.6551724137931, Blast_Score=102, Evalue=2e-22, Organism=Drosophila melanogaster, GI24583079, Length=174, Percent_Identity=39.6551724137931, Blast_Score=102, Evalue=2e-22, Organism=Drosophila melanogaster, GI19922422, Length=249, Percent_Identity=27.3092369477912, Blast_Score=99, Evalue=4e-21, Organism=Drosophila melanogaster, GI21357171, Length=173, Percent_Identity=32.9479768786127, Blast_Score=91, Evalue=5e-19, Organism=Drosophila melanogaster, GI19920382, Length=246, Percent_Identity=26.0162601626016, Blast_Score=91, Evalue=9e-19, Organism=Drosophila melanogaster, GI24650670, Length=187, Percent_Identity=30.4812834224599, Blast_Score=84, Evalue=8e-17, Organism=Drosophila melanogaster, GI19921018, Length=197, Percent_Identity=31.4720812182741, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24583165, Length=138, Percent_Identity=31.8840579710145, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI28571729, Length=158, Percent_Identity=29.1139240506329, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI28571730, Length=158, Percent_Identity=29.1139240506329, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24654903, Length=165, Percent_Identity=24.2424242424242, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.17 [H]
Molecular weight: Translated: 27888; Mature: 27757
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: PS00166 ENOYL_COA_HYDRATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLIAFELKDQVACLTIQSPPANALSGAILKQLNERLNQIEEEGKAKAVVISGEGRFFSA CEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEC GADIKEFTGYQHASEYESLANNGQNVFDRVEHFSIPVIAAIHGAALGGGLELAMSCHIRL CCCHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEEEEE VTENTKLGLPEMNLGIIPGFAGTQRLPRLIGNARAYEMILTGEPISGQQAADWGLANHVV EECCCCCCCCCCCCCEECCCCCHHHHHHHHCCCHHEEEEEECCCCCCCCHHCCCHHHCCC PEEELLQKAMNIANKITMKSKPGISEIMHLVPYANKDQLSKGVKEEAKSFGRVFGSEDAK CHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHH EGVTAFIEKREPNFQDK HHHHHHHHHCCCCCCCC >Mature Secondary Structure TLIAFELKDQVACLTIQSPPANALSGAILKQLNERLNQIEEEGKAKAVVISGEGRFFSA EEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEC GADIKEFTGYQHASEYESLANNGQNVFDRVEHFSIPVIAAIHGAALGGGLELAMSCHIRL CCCHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEEEEE VTENTKLGLPEMNLGIIPGFAGTQRLPRLIGNARAYEMILTGEPISGQQAADWGLANHVV EECCCCCCCCCCCCCEECCCCCHHHHHHHHCCCHHEEEEEECCCCCCCCHHCCCHHHCCC PEEELLQKAMNIANKITMKSKPGISEIMHLVPYANKDQLSKGVKEEAKSFGRVFGSEDAK CHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHH EGVTAFIEKREPNFQDK HHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969504; 9384377 [H]