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The map label for this gene is ytcQ [H]

Identifier: 23099546

GI number: 23099546

Start: 2122842

End: 2124356

Strand: Reverse

Name: ytcQ [H]

Synonym: OB2091

Alternate gene names: 23099546

Gene position: 2124356-2122842 (Counterclockwise)

Preceding gene: 23099549

Following gene: 23099545

Centisome position: 58.51

GC content: 35.51

Gene sequence:

>1515_bases
ATGAACAAAAAAAGATTTCTGTTTACCTGTTTTTTACTTATTTTATTACTTGTTCTGACAGCGTGCAATAACGAAAATGC
TTCAAGTGAGGAAAGCAATGAAGATTTTAATGAAGATGAAGTTTATTCTTTTTCCATTATGGCAAATCTTCATACGCCTG
AAGTACCTGGAGATGTAATTTTGGATATTTTAGAAGAGAAAACAAACACAGAGATTGAGTTTCAGTGGGTACCAGATAAT
AACTATGAAGATAGGTTAAACACAGCATTCGCTACTAATACACTTCCAGAAGCAGTATTTATGAAAAACCAGACAACATT
TATGCAATTTAAAGATGCAATAAGAGATGATCAATTCTGGGAAGTCGGTCCTTATTTAGAAGAGTTTGAAAACCTAGGTA
ATCTTAAAGAAGAAGTATTAGAAAATACAAAAGTTGATGGTAAAATCTATTCTTTATATCAAGGAAGACCATTATCAAGA
CAAGGGATAATATACAGAAAAGACTGGGCTGATAATCTAGGTCTTTCTGCACCAACAACGACTGACGAGTTTATGGAAAT
GGCACGTGCTTTCACTGAGGATGATCCAGATGGCAATGGTAAAGATGATACGTTTGGCCTTACCGACCGAAGCGATTTGG
TTTATGGTGCTTTTAAAACAGTATCCTCATGGTTTGGTACTCCGAATAATTGGGGAGAGCAAGATGGAGAGTTGGTTCCT
GAATTCATGTTCCCTGAATATAAACAAGCGATGGACTTTTTTAAGGAAATGCATGAAAACGGATACATCAATAAAGATTT
CCCAGTAACAAGTAAAGTAGATCAACAAGAATTTATTAAAAATGGATCTTCCGGAATTTATGTAGGATCTATGGGTGACG
TAGTAACTTTACACAGTGATGCTGCTGCTATTAATCCAGATGTAGTATATGATGTCCACAATCAAGTTGAAGGACCTAAT
GGTGAATATAACACGTGGGCAATTCCTGGATATGGAAACTTAGTAATGTTTCCTAAAAGTACTGTTGAATCAGAAGAAGA
ATTGAAAAGAATACTTGGATTTTTTGATGCATTAATGGATCCAGAACTGTCAAATTCCATTTATTGGGGAGTAGAAGGTG
AACATTATACAGTAAAAGAAGGTGGAGCTGTTCCAACAGAGGATCAGGCGTTATTTGACAGGGAAGTAAAACCTTATCAG
GCGATTGAAATTGGTGAGGCGGAGACAAATGGAAGATACGAAGGATTTTTTGAATACGAGCCAAAAGCGAAGTCGGAAGA
ATTGTTTAAAGATAATGAAAATTATTTAATTCATGATCCAACGATAACATTGGATTCTGAAACTAATATTCAAGATGGTT
CGAGGTTATTACAAATCATGACAGATGCAACATACCAATATATTCTCGGACAAATCGATGAGGAAGGATTTGATTCTGCA
ATAGAAAATTGGAAATCTCAAGGGGGCGAAGCGATTATCGAGGAGTTTAATGCTTCCTATGCAGAACAGAATTAA

Upstream 100 bases:

>100_bases
ATAAAAATTCTGCAAATTGTGAGAAAGTGATTATGTACAACCTGAAAATTTTAAAATAACATTAAACTATACAAAAATAA
ATTTCTAAGGAGGTTAAAAA

Downstream 100 bases:

>100_bases
TTCGAAGAAGTATTCATGACATTATATTTTTAACAATTTTACGGCCTTTTCTTACTATCAAATGGGAAAGGGCCGTTGTA
ATTTCTCATAGTACACATTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 504; Mature: 504

Protein sequence:

>504_residues
MNKKRFLFTCFLLILLLVLTACNNENASSEESNEDFNEDEVYSFSIMANLHTPEVPGDVILDILEEKTNTEIEFQWVPDN
NYEDRLNTAFATNTLPEAVFMKNQTTFMQFKDAIRDDQFWEVGPYLEEFENLGNLKEEVLENTKVDGKIYSLYQGRPLSR
QGIIYRKDWADNLGLSAPTTTDEFMEMARAFTEDDPDGNGKDDTFGLTDRSDLVYGAFKTVSSWFGTPNNWGEQDGELVP
EFMFPEYKQAMDFFKEMHENGYINKDFPVTSKVDQQEFIKNGSSGIYVGSMGDVVTLHSDAAAINPDVVYDVHNQVEGPN
GEYNTWAIPGYGNLVMFPKSTVESEEELKRILGFFDALMDPELSNSIYWGVEGEHYTVKEGGAVPTEDQALFDREVKPYQ
AIEIGEAETNGRYEGFFEYEPKAKSEELFKDNENYLIHDPTITLDSETNIQDGSRLLQIMTDATYQYILGQIDEEGFDSA
IENWKSQGGEAIIEEFNASYAEQN

Sequences:

>Translated_504_residues
MNKKRFLFTCFLLILLLVLTACNNENASSEESNEDFNEDEVYSFSIMANLHTPEVPGDVILDILEEKTNTEIEFQWVPDN
NYEDRLNTAFATNTLPEAVFMKNQTTFMQFKDAIRDDQFWEVGPYLEEFENLGNLKEEVLENTKVDGKIYSLYQGRPLSR
QGIIYRKDWADNLGLSAPTTTDEFMEMARAFTEDDPDGNGKDDTFGLTDRSDLVYGAFKTVSSWFGTPNNWGEQDGELVP
EFMFPEYKQAMDFFKEMHENGYINKDFPVTSKVDQQEFIKNGSSGIYVGSMGDVVTLHSDAAAINPDVVYDVHNQVEGPN
GEYNTWAIPGYGNLVMFPKSTVESEEELKRILGFFDALMDPELSNSIYWGVEGEHYTVKEGGAVPTEDQALFDREVKPYQ
AIEIGEAETNGRYEGFFEYEPKAKSEELFKDNENYLIHDPTITLDSETNIQDGSRLLQIMTDATYQYILGQIDEEGFDSA
IENWKSQGGEAIIEEFNASYAEQN
>Mature_504_residues
MNKKRFLFTCFLLILLLVLTACNNENASSEESNEDFNEDEVYSFSIMANLHTPEVPGDVILDILEEKTNTEIEFQWVPDN
NYEDRLNTAFATNTLPEAVFMKNQTTFMQFKDAIRDDQFWEVGPYLEEFENLGNLKEEVLENTKVDGKIYSLYQGRPLSR
QGIIYRKDWADNLGLSAPTTTDEFMEMARAFTEDDPDGNGKDDTFGLTDRSDLVYGAFKTVSSWFGTPNNWGEQDGELVP
EFMFPEYKQAMDFFKEMHENGYINKDFPVTSKVDQQEFIKNGSSGIYVGSMGDVVTLHSDAAAINPDVVYDVHNQVEGPN
GEYNTWAIPGYGNLVMFPKSTVESEEELKRILGFFDALMDPELSNSIYWGVEGEHYTVKEGGAVPTEDQALFDREVKPYQ
AIEIGEAETNGRYEGFFEYEPKAKSEELFKDNENYLIHDPTITLDSETNIQDGSRLLQIMTDATYQYILGQIDEEGFDSA
IENWKSQGGEAIIEEFNASYAEQN

Specific function: Probably part of a binding-protein-dependent transport system [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 57429; Mature: 57429

Theoretical pI: Translated: 3.90; Mature: 3.90

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKRFLFTCFLLILLLVLTACNNENASSEESNEDFNEDEVYSFSIMANLHTPEVPGDVI
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCHHHH
LDILEEKTNTEIEFQWVPDNNYEDRLNTAFATNTLPEAVFMKNQTTFMQFKDAIRDDQFW
HHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHCCCCCE
EVGPYLEEFENLGNLKEEVLENTKVDGKIYSLYQGRPLSRQGIIYRKDWADNLGLSAPTT
ECCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCC
TDEFMEMARAFTEDDPDGNGKDDTFGLTDRSDLVYGAFKTVSSWFGTPNNWGEQDGELVP
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
EFMFPEYKQAMDFFKEMHENGYINKDFPVTSKVDQQEFIKNGSSGIYVGSMGDVVTLHSD
HHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCEEEEECCCCEEEEECC
AAAINPDVVYDVHNQVEGPNGEYNTWAIPGYGNLVMFPKSTVESEEELKRILGFFDALMD
CCCCCCCEEEEHHHHCCCCCCCCCEEEECCCCCEEECCCHHCCCHHHHHHHHHHHHHHCC
PELSNSIYWGVEGEHYTVKEGGAVPTEDQALFDREVKPYQAIEIGEAETNGRYEGFFEYE
CCCCCCEEEECCCCEEEECCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEC
PKAKSEELFKDNENYLIHDPTITLDSETNIQDGSRLLQIMTDATYQYILGQIDEEGFDSA
CCCCCHHHHCCCCCEEEECCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
IENWKSQGGEAIIEEFNASYAEQN
HHHHHHCCCHHHHHHHCCHHCCCC
>Mature Secondary Structure
MNKKRFLFTCFLLILLLVLTACNNENASSEESNEDFNEDEVYSFSIMANLHTPEVPGDVI
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCHHHH
LDILEEKTNTEIEFQWVPDNNYEDRLNTAFATNTLPEAVFMKNQTTFMQFKDAIRDDQFW
HHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHCCCCCE
EVGPYLEEFENLGNLKEEVLENTKVDGKIYSLYQGRPLSRQGIIYRKDWADNLGLSAPTT
ECCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCC
TDEFMEMARAFTEDDPDGNGKDDTFGLTDRSDLVYGAFKTVSSWFGTPNNWGEQDGELVP
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
EFMFPEYKQAMDFFKEMHENGYINKDFPVTSKVDQQEFIKNGSSGIYVGSMGDVVTLHSD
HHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCEEEEECCCCEEEEECC
AAAINPDVVYDVHNQVEGPNGEYNTWAIPGYGNLVMFPKSTVESEEELKRILGFFDALMD
CCCCCCCEEEEHHHHCCCCCCCCCEEEECCCCCEEECCCHHCCCHHHHHHHHHHHHHHCC
PELSNSIYWGVEGEHYTVKEGGAVPTEDQALFDREVKPYQAIEIGEAETNGRYEGFFEYE
CCCCCCEEEECCCCEEEECCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEC
PKAKSEELFKDNENYLIHDPTITLDSETNIQDGSRLLQIMTDATYQYILGQIDEEGFDSA
CCCCCHHHHCCCCCEEEECCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
IENWKSQGGEAIIEEFNASYAEQN
HHHHHHCCCHHHHHHHCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]