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The map label for this gene is yrrC [H]

Identifier: 23099467

GI number: 23099467

Start: 2035532

End: 2037862

Strand: Reverse

Name: yrrC [H]

Synonym: OB2012

Alternate gene names: 23099467

Gene position: 2037862-2035532 (Counterclockwise)

Preceding gene: 23099468

Following gene: 23099466

Centisome position: 56.13

GC content: 34.71

Gene sequence:

>2331_bases
ATGACAGAACAAATTATGTCTGAAGATCAAAATGTACCTTTATTTGCCAAAGGAACCGTTCTGACTACAATATTTCAAAA
TGCAGCCGAACATTTTTCGATTGTTCGTGTCCAAATAGATGACACGAATTTAGATTATGAGGATAAGGAAATTATTGTAA
AAGGATATTTTGATACCCTTCAAGAACAAACTGCTTACTGTTTTTATGGTGAATTAGAAAAACATCCTAGATATGGAACA
CAACTAAAGGTTCAGTCTTATGAAACAATAATACCAAGTTCAAGAGATGGTTTGATAAGTTATCTATCAAGCGATCTCTT
TTATGGCGTTGGAAAAACAACTGCAGAGAGAATAGTAGATAGACTGGGTGAGCAGGCAATAACAAAGATTTTGGATAATG
ATGATGCTTTAAAGGGAATTAAGGGATTATCTAAAGAGACAGCAGAACGATTATCAAATCGATTAAAGGAAAATCAAGGA
TTTGAACATGTCGCTGTTCATTTAGCAACATATGGAATCGGCTTAAAGATGGCTCAAGTTATATATCAGACGTATAAAGA
TGAAGCCATAGATTTATTAAAACAAGACCCATATCAGTTTGTATTTGATATAGAGGGATTTGGTTTCCGAACAGCCGATC
AAATAGCTACCCAACAAGGAATAGCTGGAACGCATGAAAGTAGAATTGGTGCAGGGATTATCTTTGTTTTACAGCGGGCA
ATTCAATCTGGGCACGTGTATGTTCCTTTACGAGATTGTCTAGAAGAAGTTGTTGATTTGTTACGAATTGCAACTAGTGA
TATAGAAATTGTTTCTTTCGTTTTTAAACAATTAAATACAGCTAAGAAAATAATCATCATCGATGAAAAAGTTTATTTAC
CTTCTCTATATTATGCAGAAGATGGCTTTGCAGCTAATCTAAAGCGAATCCTTGATAAGCCAATGGAAGAAAATATCCCT
ATGGCAGAAATGTTAAAGATTATCGGTTCGATTGAAGAAGAAGAGGTATTAAGCTACGGGAAAGAACAATTTGATGCTAT
TAATCATGCCATTCATTCTAAATTAATGATTTTAACGGGTGGTCCTGGAACAGGCAAAACAACTGTGATAAAGGGTATTT
TAAAGGCGTACGCGTCCTTGCAAAAGGTATCATTGGACCCAAAGGATTATAAGAATAAATCAGATTTTCCATTTGTACTT
ACAGCTCCTACAGGTAGAGCAGCAAAACGCATGACAGAGTCCACAGGGATTCCTGCAGTAACCATTCATCGATTATTAGG
TTGGAACGGGATTGGTAGCTTTGAAAAAGATGAGCATGAACAATTAGAGGGAAAGTTATTAATCGTGGATGAATTTTCGA
TGGTAGATATATGGCTAGCAAATCATCTATTTAAAGCTATTCCAGCGGATATGCAAGTGTTATTAGTAGGTGATGAAGAT
CAACTTCCTTCTGTGGGTCCAGGACAAGTTTTAACTGATCTAATGCATAGTAATTTGTTACCGACGGTGTCTCTTCAAGA
GGTATACCGGCAAAAGGAAGGTTCAAAAATCATTCAGTTAGCTCATGAAATTAAACAAGATAATTGTTCAGCAAATTCTT
TATCCAATGATCGAGATTTTAGTTTTATTTCATGTAGAGAACCTCAAATGATTGAAGTGATATCTTCTGTTATGAAAAAA
GCAAAAGCAAAAGGAATTGATTTGAATAATATTCAAGTCTTAGCTCCAATGTATCGCTCCCAAGCTGGTATTAATATCAT
TAACCAGGAATTACAAAAATTAATAAATCCACCAACGGAGAAGCGTAGAGAAATTCATTATCAAGATGTGATTTACCGAA
CCGGTGATCGTGTCATTCAACTTGTCAATCAACCTGAAGATGGTGTATATAATGGTGATATTGGTGAAATAGTAGCGATA
TTCAAACCAGAAGAAAATACGGAACATGAAGAACAAATTGTGATTGCTTTTGAAGATCGAGAAGTTGTTTATATTCGTAA
AGACTATAATAATTTCACACATGCTTTTTGTATCTCAATCCATAAATCACAAGGGAGTGAATTTCCGATTGTGCTGTTAC
CGGTTGTTTATGCACATCACCGTATGTTGAGAAAGAATTTATTGTATACAGCAATAACTAGAAGTAAAGAATCTCTCATC
ATATGTGGAGAACAACCTGCATTTCTTAAAGGTGTAAATACCAAAGACACAAATCAACGTAATACTTCCTTAAAGGATGC
TTTAGTTACACGAATAGAAAATGAATCTGCAAATGAAGACTCTGAACAAGAACAAGAAGAAGATGAAGTATCCCCATATG
ACTTTATGTAA

Upstream 100 bases:

>100_bases
TCACTTCAAGACTGTGAGGTTAAAGTCTGATTCTGTTCAACTTGGGGAAGAATGAAAACCCATTGATTGAAGATTCACTT
TATGTTAAGGGGTTAATAAA

Downstream 100 bases:

>100_bases
CTAGAGTATAATTATTCATTTATTGGGCAAGGATAGTAGCAATAATTCTATGAAGAGGGGATATATATGCTACGTTGCCC
AAATTGTCGTGGTAAACAAA

Product: conjugation transfer protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 776; Mature: 775

Protein sequence:

>776_residues
MTEQIMSEDQNVPLFAKGTVLTTIFQNAAEHFSIVRVQIDDTNLDYEDKEIIVKGYFDTLQEQTAYCFYGELEKHPRYGT
QLKVQSYETIIPSSRDGLISYLSSDLFYGVGKTTAERIVDRLGEQAITKILDNDDALKGIKGLSKETAERLSNRLKENQG
FEHVAVHLATYGIGLKMAQVIYQTYKDEAIDLLKQDPYQFVFDIEGFGFRTADQIATQQGIAGTHESRIGAGIIFVLQRA
IQSGHVYVPLRDCLEEVVDLLRIATSDIEIVSFVFKQLNTAKKIIIIDEKVYLPSLYYAEDGFAANLKRILDKPMEENIP
MAEMLKIIGSIEEEEVLSYGKEQFDAINHAIHSKLMILTGGPGTGKTTVIKGILKAYASLQKVSLDPKDYKNKSDFPFVL
TAPTGRAAKRMTESTGIPAVTIHRLLGWNGIGSFEKDEHEQLEGKLLIVDEFSMVDIWLANHLFKAIPADMQVLLVGDED
QLPSVGPGQVLTDLMHSNLLPTVSLQEVYRQKEGSKIIQLAHEIKQDNCSANSLSNDRDFSFISCREPQMIEVISSVMKK
AKAKGIDLNNIQVLAPMYRSQAGINIINQELQKLINPPTEKRREIHYQDVIYRTGDRVIQLVNQPEDGVYNGDIGEIVAI
FKPEENTEHEEQIVIAFEDREVVYIRKDYNNFTHAFCISIHKSQGSEFPIVLLPVVYAHHRMLRKNLLYTAITRSKESLI
ICGEQPAFLKGVNTKDTNQRNTSLKDALVTRIENESANEDSEQEQEEDEVSPYDFM

Sequences:

>Translated_776_residues
MTEQIMSEDQNVPLFAKGTVLTTIFQNAAEHFSIVRVQIDDTNLDYEDKEIIVKGYFDTLQEQTAYCFYGELEKHPRYGT
QLKVQSYETIIPSSRDGLISYLSSDLFYGVGKTTAERIVDRLGEQAITKILDNDDALKGIKGLSKETAERLSNRLKENQG
FEHVAVHLATYGIGLKMAQVIYQTYKDEAIDLLKQDPYQFVFDIEGFGFRTADQIATQQGIAGTHESRIGAGIIFVLQRA
IQSGHVYVPLRDCLEEVVDLLRIATSDIEIVSFVFKQLNTAKKIIIIDEKVYLPSLYYAEDGFAANLKRILDKPMEENIP
MAEMLKIIGSIEEEEVLSYGKEQFDAINHAIHSKLMILTGGPGTGKTTVIKGILKAYASLQKVSLDPKDYKNKSDFPFVL
TAPTGRAAKRMTESTGIPAVTIHRLLGWNGIGSFEKDEHEQLEGKLLIVDEFSMVDIWLANHLFKAIPADMQVLLVGDED
QLPSVGPGQVLTDLMHSNLLPTVSLQEVYRQKEGSKIIQLAHEIKQDNCSANSLSNDRDFSFISCREPQMIEVISSVMKK
AKAKGIDLNNIQVLAPMYRSQAGINIINQELQKLINPPTEKRREIHYQDVIYRTGDRVIQLVNQPEDGVYNGDIGEIVAI
FKPEENTEHEEQIVIAFEDREVVYIRKDYNNFTHAFCISIHKSQGSEFPIVLLPVVYAHHRMLRKNLLYTAITRSKESLI
ICGEQPAFLKGVNTKDTNQRNTSLKDALVTRIENESANEDSEQEQEEDEVSPYDFM
>Mature_775_residues
TEQIMSEDQNVPLFAKGTVLTTIFQNAAEHFSIVRVQIDDTNLDYEDKEIIVKGYFDTLQEQTAYCFYGELEKHPRYGTQ
LKVQSYETIIPSSRDGLISYLSSDLFYGVGKTTAERIVDRLGEQAITKILDNDDALKGIKGLSKETAERLSNRLKENQGF
EHVAVHLATYGIGLKMAQVIYQTYKDEAIDLLKQDPYQFVFDIEGFGFRTADQIATQQGIAGTHESRIGAGIIFVLQRAI
QSGHVYVPLRDCLEEVVDLLRIATSDIEIVSFVFKQLNTAKKIIIIDEKVYLPSLYYAEDGFAANLKRILDKPMEENIPM
AEMLKIIGSIEEEEVLSYGKEQFDAINHAIHSKLMILTGGPGTGKTTVIKGILKAYASLQKVSLDPKDYKNKSDFPFVLT
APTGRAAKRMTESTGIPAVTIHRLLGWNGIGSFEKDEHEQLEGKLLIVDEFSMVDIWLANHLFKAIPADMQVLLVGDEDQ
LPSVGPGQVLTDLMHSNLLPTVSLQEVYRQKEGSKIIQLAHEIKQDNCSANSLSNDRDFSFISCREPQMIEVISSVMKKA
KAKGIDLNNIQVLAPMYRSQAGINIINQELQKLINPPTEKRREIHYQDVIYRTGDRVIQLVNQPEDGVYNGDIGEIVAIF
KPEENTEHEEQIVIAFEDREVVYIRKDYNNFTHAFCISIHKSQGSEFPIVLLPVVYAHHRMLRKNLLYTAITRSKESLII
CGEQPAFLKGVNTKDTNQRNTSLKDALVTRIENESANEDSEQEQEEDEVSPYDFM

Specific function: Exhibits Several Catalytic Activities, Including ATP-Dependent Exonuclease, ATP-Stimulated Endonuclease, ATP-Dependent Unwinding And DNA-Dependent ATPase Activities. Strand Cleavage Occurs 5' To 3' During The Unwinding Of Duplex DNA At Chi Sequences, Whi

COG id: COG0507

COG function: function code L; ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789182, Length=420, Percent_Identity=25.952380952381, Blast_Score=100, Evalue=5e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR006345 [H]

Pfam domain/function: NA

EC number: 3.1.11.5

Molecular weight: Translated: 87610; Mature: 87479

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEQIMSEDQNVPLFAKGTVLTTIFQNAAEHFSIVRVQIDDTNLDYEDKEIIVKGYFDTL
CCCHHHCCCCCCCEEECCHHHHHHHHHHHCCEEEEEEEEECCCCCCCCCEEEEEHHHHHH
QEQTAYCFYGELEKHPRYGTQLKVQSYETIIPSSRDGLISYLSSDLFYGVGKTTAERIVD
HHCCEEEEECCHHCCCCCCCEEEEECHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
RLGEQAITKILDNDDALKGIKGLSKETAERLSNRLKENQGFEHVAVHLATYGIGLKMAQV
HHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
IYQTYKDEAIDLLKQDPYQFVFDIEGFGFRTADQIATQQGIAGTHESRIGAGIIFVLQRA
HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
IQSGHVYVPLRDCLEEVVDLLRIATSDIEIVSFVFKQLNTAKKIIIIDEKVYLPSLYYAE
HHCCEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCEECCEEEECC
DGFAANLKRILDKPMEENIPMAEMLKIIGSIEEEEVLSYGKEQFDAINHAIHSKLMILTG
CCHHHHHHHHHCCHHHCCCCHHHHHHHHCCCCHHHHHHHCHHHHHHHHHHHHCEEEEEEC
GPGTGKTTVIKGILKAYASLQKVSLDPKDYKNKSDFPFVLTAPTGRAAKRMTESTGIPAV
CCCCCHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCEEEECCCCHHHHHHHHHCCCCHH
TIHRLLGWNGIGSFEKDEHEQLEGKLLIVDEFSMVDIWLANHLFKAIPADMQVLLVGDED
HHHHHHCCCCCCCCCCCHHHHHCCEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCCC
QLPSVGPGQVLTDLMHSNLLPTVSLQEVYRQKEGSKIIQLAHEIKQDNCSANSLSNDRDF
CCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCC
SFISCREPQMIEVISSVMKKAKAKGIDLNNIQVLAPMYRSQAGINIINQELQKLINPPTE
CEEECCCCHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHCCCCHHHHHHHHHHHCCCCHH
KRREIHYQDVIYRTGDRVIQLVNQPEDGVYNGDIGEIVAIFKPEENTEHEEQIVIAFEDR
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHEEEEECCCCCCCCCCEEEEEEECC
EVVYIRKDYNNFTHAFCISIHKSQGSEFPIVLLPVVYAHHRMLRKNLLYTAITRSKESLI
EEEEEEECCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
ICGEQPAFLKGVNTKDTNQRNTSLKDALVTRIENESANEDSEQEQEEDEVSPYDFM
EECCCCHHEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TEQIMSEDQNVPLFAKGTVLTTIFQNAAEHFSIVRVQIDDTNLDYEDKEIIVKGYFDTL
CCHHHCCCCCCCEEECCHHHHHHHHHHHCCEEEEEEEEECCCCCCCCCEEEEEHHHHHH
QEQTAYCFYGELEKHPRYGTQLKVQSYETIIPSSRDGLISYLSSDLFYGVGKTTAERIVD
HHCCEEEEECCHHCCCCCCCEEEEECHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
RLGEQAITKILDNDDALKGIKGLSKETAERLSNRLKENQGFEHVAVHLATYGIGLKMAQV
HHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
IYQTYKDEAIDLLKQDPYQFVFDIEGFGFRTADQIATQQGIAGTHESRIGAGIIFVLQRA
HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
IQSGHVYVPLRDCLEEVVDLLRIATSDIEIVSFVFKQLNTAKKIIIIDEKVYLPSLYYAE
HHCCEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCEECCEEEECC
DGFAANLKRILDKPMEENIPMAEMLKIIGSIEEEEVLSYGKEQFDAINHAIHSKLMILTG
CCHHHHHHHHHCCHHHCCCCHHHHHHHHCCCCHHHHHHHCHHHHHHHHHHHHCEEEEEEC
GPGTGKTTVIKGILKAYASLQKVSLDPKDYKNKSDFPFVLTAPTGRAAKRMTESTGIPAV
CCCCCHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCEEEECCCCHHHHHHHHHCCCCHH
TIHRLLGWNGIGSFEKDEHEQLEGKLLIVDEFSMVDIWLANHLFKAIPADMQVLLVGDED
HHHHHHCCCCCCCCCCCHHHHHCCEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCCC
QLPSVGPGQVLTDLMHSNLLPTVSLQEVYRQKEGSKIIQLAHEIKQDNCSANSLSNDRDF
CCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCC
SFISCREPQMIEVISSVMKKAKAKGIDLNNIQVLAPMYRSQAGINIINQELQKLINPPTE
CEEECCCCHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHCCCCHHHHHHHHHHHCCCCHH
KRREIHYQDVIYRTGDRVIQLVNQPEDGVYNGDIGEIVAIFKPEENTEHEEQIVIAFEDR
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHEEEEECCCCCCCCCCEEEEEEECC
EVVYIRKDYNNFTHAFCISIHKSQGSEFPIVLLPVVYAHHRMLRKNLLYTAITRSKESLI
EEEEEEECCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
ICGEQPAFLKGVNTKDTNQRNTSLKDALVTRIENESANEDSEQEQEEDEVSPYDFM
EECCCCHHEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: DNA-dependent ATPase activity; Phosphoric ester hydrolysis [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]