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The map label for this gene is sirB [H]

Identifier: 23099111

GI number: 23099111

Start: 1699832

End: 1700578

Strand: Direct

Name: sirB [H]

Synonym: OB1656

Alternate gene names: 23099111

Gene position: 1699832-1700578 (Clockwise)

Preceding gene: 23099110

Following gene: 23099112

Centisome position: 46.82

GC content: 40.29

Gene sequence:

>747_bases
GTGCAAGGGGTGCTTTATGTCAGTCACGGTAGTCGTATACCTGAAGCAACAGCAGATGCAATTGCTTTTATTAATCAAGT
GAAAAAACAGATTGGTATTCCATTGCAGGAAACTTGTTTTCTGGAAATTTCCGAACCAGATGTCGGGCAGGGCATCAATA
AGCTCTTAAAAAAAGGAGCGACGAAGATTGCTATTGTACCTGTCCTCCTATTACGTGCCGGGCATTACTATCAGGATATT
CCAGAAGAAGTCGAACGAATTAAAGTTGAATTTCCTTCTATACAATTTACCTATGGGGAACCACTTGGCGTACAAACCCG
TTTGACGAATGTTTTGGCAGAGCGGGTGGGAGAAACAAATATTAAGGTCCGTAAAGGTTCAAAAATCCTGCTTGTTGGCC
GGGGAAGCCGTAGCCCCCAAACGAAAAAAGATATTGAGCAAATTGCATCGAATTTGCAGATGAAAATGAACGTGCATGTC
GATGTCTGTTATTTGGCTGCGTGCAGTCCTTCGTTTGAACAAGGATTAAGGTCCTCATTGGAAGAGGAAGGTTACTCACG
TGTTTTTGTCCTACCATATTTATGGTTTACAGGGGTATTGTTTCAATCTATGGAAAGTGAAATCAACAATATGGAGAAGA
AGGAAAAGAATTTTATTCTCTGTCGTCAATTGTCTGATCATCCAATTATGGTCGAAGCATTGAAAGAACGAGTTTTAGAA
GCAATTCATTCAAATACAAACTTATAG

Upstream 100 bases:

>100_bases
TGAAGTAGTGCGACTTAGGGATGAGATTCAATGGTTTAATGAGGAAACGATAGAACACTTTAATCCAGAAGTGGTTATTG
GATAGTTGGGAGGTGCAGTT

Downstream 100 bases:

>100_bases
AGGGGAGGTTAGATAATGGCTTTCACTCCACTGATGATTGATTTAAGTGACAGGCATGTCGTAATAGTCGGCGGAGGAAA
AGTAGCTCTTCGCAGAGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MQGVLYVSHGSRIPEATADAIAFINQVKKQIGIPLQETCFLEISEPDVGQGINKLLKKGATKIAIVPVLLLRAGHYYQDI
PEEVERIKVEFPSIQFTYGEPLGVQTRLTNVLAERVGETNIKVRKGSKILLVGRGSRSPQTKKDIEQIASNLQMKMNVHV
DVCYLAACSPSFEQGLRSSLEEEGYSRVFVLPYLWFTGVLFQSMESEINNMEKKEKNFILCRQLSDHPIMVEALKERVLE
AIHSNTNL

Sequences:

>Translated_248_residues
MQGVLYVSHGSRIPEATADAIAFINQVKKQIGIPLQETCFLEISEPDVGQGINKLLKKGATKIAIVPVLLLRAGHYYQDI
PEEVERIKVEFPSIQFTYGEPLGVQTRLTNVLAERVGETNIKVRKGSKILLVGRGSRSPQTKKDIEQIASNLQMKMNVHV
DVCYLAACSPSFEQGLRSSLEEEGYSRVFVLPYLWFTGVLFQSMESEINNMEKKEKNFILCRQLSDHPIMVEALKERVLE
AIHSNTNL
>Mature_248_residues
MQGVLYVSHGSRIPEATADAIAFINQVKKQIGIPLQETCFLEISEPDVGQGINKLLKKGATKIAIVPVLLLRAGHYYQDI
PEEVERIKVEFPSIQFTYGEPLGVQTRLTNVLAERVGETNIKVRKGSKILLVGRGSRSPQTKKDIEQIASNLQMKMNVHV
DVCYLAACSPSFEQGLRSSLEEEGYSRVFVLPYLWFTGVLFQSMESEINNMEKKEKNFILCRQLSDHPIMVEALKERVLE
AIHSNTNL

Specific function: Chelates iron to the siroheme precursor [H]

COG id: COG2138

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiX family. SirB subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002762 [H]

Pfam domain/function: PF01903 CbiX [H]

EC number: =4.99.1.4 [H]

Molecular weight: Translated: 27890; Mature: 27890

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGVLYVSHGSRIPEATADAIAFINQVKKQIGIPLQETCFLEISEPDVGQGINKLLKKGA
CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCC
TKIAIVPVLLLRAGHYYQDIPEEVERIKVEFPSIQFTYGEPLGVQTRLTNVLAERVGETN
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCCCC
IKVRKGSKILLVGRGSRSPQTKKDIEQIASNLQMKMNVHVDVCYLAACSPSFEQGLRSSL
EEEECCCEEEEEECCCCCCCHHHHHHHHHHCCEEEEEEEEEEEEEECCCCHHHHHHHHHH
EEEGYSRVFVLPYLWFTGVLFQSMESEINNMEKKEKNFILCRQLSDHPIMVEALKERVLE
HHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHH
AIHSNTNL
HHHCCCCC
>Mature Secondary Structure
MQGVLYVSHGSRIPEATADAIAFINQVKKQIGIPLQETCFLEISEPDVGQGINKLLKKGA
CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCC
TKIAIVPVLLLRAGHYYQDIPEEVERIKVEFPSIQFTYGEPLGVQTRLTNVLAERVGETN
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCCCC
IKVRKGSKILLVGRGSRSPQTKKDIEQIASNLQMKMNVHVDVCYLAACSPSFEQGLRSSL
EEEECCCEEEEEECCCCCCCHHHHHHHHHHCCEEEEEEEEEEEEEECCCCHHHHHHHHHH
EEEGYSRVFVLPYLWFTGVLFQSMESEINNMEKKEKNFILCRQLSDHPIMVEALKERVLE
HHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHH
AIHSNTNL
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA