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The map label for this gene is ymdB [H]

Identifier: 23099081

GI number: 23099081

Start: 1666416

End: 1667213

Strand: Direct

Name: ymdB [H]

Synonym: OB1626

Alternate gene names: 23099081

Gene position: 1666416-1667213 (Clockwise)

Preceding gene: 23099080

Following gene: 23099082

Centisome position: 45.9

GC content: 37.34

Gene sequence:

>798_bases
ATGAAAATTTTATTTATAGGTGATGTTGTTGGATCACCTGGTAGAGATATGTTATTTGAGTATCTACCTAAACTAAAAGA
TAAATATAAGCCTCACATGACAATTATAAATGGGGAGAACGCAGCAGCCGGTAAGGGAATTACAGAAAAGATTTACAAAC
AATTTCTTGAGGCTGGTGCTCAGGTTATCACGATGGGAAATCATACGTGGGATAAGAAAGAAATCTTTGAGTTCATCGAT
AGTGCTCATAATATGATTCGTCCAGCAAATTTCCCGGATAATAATCCTGGTAAAGGAATTATTTACTCTAATTTTAACGG
TAAAGAAATAGCGGTAATTAATTTACAGGGAAGAACGTTTCTACCGCCTGTAGATGATCCATTCCGTAAAGCCGATGAAC
TTATTGATGAAGCGAAGTTGCGAACAAATATTATTTTCGTTGATTTTCATGGAGAAGCAACGAGTGAAAAACAAGCAATG
GCTTGGTATTTAGATGGTAGAGTATCAGCAGTTGTAGGGACACATACGCATACACAAACTGCCGATGAACGAATATTACC
AGATGGTACAGCATATATATCTGATGTGGGGATGACAGGCCCGTACGATGGTATATTAGGTGTAGAAAGAGAAACGATAA
TGAAACGATTCTTAACATCTCTTCCTGTACGTTTTGAAATTGATAAAACGGGAAGAACACAATTAAATGGAGTAATTATT
ACCATCGATGATACATCGGGCCGAGCGAAAAACATCGAGCGGATTATGATTAACGAGGACCATCCATTCTTCTCGTAA

Upstream 100 bases:

>100_bases
TATTGAATAATACTACTCGCTTATGATCAACTAGTTTTTGACAATCGCTGTTAGGTGTGAAAAACTAAATATATATAATG
TAGATAGGATGATTTTTAGA

Downstream 100 bases:

>100_bases
TAATGATTTGTTGCTCCTAAAGGGAATATGCTAACATCTCCAAGAATATAGTAGCAGTATAATTACAATAGTGCATGAGG
AGGTACTAGTAATGGAAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MKILFIGDVVGSPGRDMLFEYLPKLKDKYKPHMTIINGENAAAGKGITEKIYKQFLEAGAQVITMGNHTWDKKEIFEFID
SAHNMIRPANFPDNNPGKGIIYSNFNGKEIAVINLQGRTFLPPVDDPFRKADELIDEAKLRTNIIFVDFHGEATSEKQAM
AWYLDGRVSAVVGTHTHTQTADERILPDGTAYISDVGMTGPYDGILGVERETIMKRFLTSLPVRFEIDKTGRTQLNGVII
TIDDTSGRAKNIERIMINEDHPFFS

Sequences:

>Translated_265_residues
MKILFIGDVVGSPGRDMLFEYLPKLKDKYKPHMTIINGENAAAGKGITEKIYKQFLEAGAQVITMGNHTWDKKEIFEFID
SAHNMIRPANFPDNNPGKGIIYSNFNGKEIAVINLQGRTFLPPVDDPFRKADELIDEAKLRTNIIFVDFHGEATSEKQAM
AWYLDGRVSAVVGTHTHTQTADERILPDGTAYISDVGMTGPYDGILGVERETIMKRFLTSLPVRFEIDKTGRTQLNGVII
TIDDTSGRAKNIERIMINEDHPFFS
>Mature_265_residues
MKILFIGDVVGSPGRDMLFEYLPKLKDKYKPHMTIINGENAAAGKGITEKIYKQFLEAGAQVITMGNHTWDKKEIFEFID
SAHNMIRPANFPDNNPGKGIIYSNFNGKEIAVINLQGRTFLPPVDDPFRKADELIDEAKLRTNIIFVDFHGEATSEKQAM
AWYLDGRVSAVVGTHTHTQTADERILPDGTAYISDVGMTGPYDGILGVERETIMKRFLTSLPVRFEIDKTGRTQLNGVII
TIDDTSGRAKNIERIMINEDHPFFS

Specific function: Unknown

COG id: COG1692

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005235 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29724; Mature: 29724

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILFIGDVVGSPGRDMLFEYLPKLKDKYKPHMTIINGENAAAGKGITEKIYKQFLEAGA
CEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCC
QVITMGNHTWDKKEIFEFIDSAHNMIRPANFPDNNPGKGIIYSNFNGKEIAVINLQGRTF
EEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCEE
LPPVDDPFRKADELIDEAKLRTNIIFVDFHGEATSEKQAMAWYLDGRVSAVVGTHTHTQT
CCCCCCHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCCEEEEEECCEEEEEEECCCCCCC
ADERILPDGTAYISDVGMTGPYDGILGVERETIMKRFLTSLPVRFEIDKTGRTQLNGVII
CCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEECCCCCEEECEEEE
TIDDTSGRAKNIERIMINEDHPFFS
EEECCCCCCCCCEEEEEECCCCCCC
>Mature Secondary Structure
MKILFIGDVVGSPGRDMLFEYLPKLKDKYKPHMTIINGENAAAGKGITEKIYKQFLEAGA
CEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCC
QVITMGNHTWDKKEIFEFIDSAHNMIRPANFPDNNPGKGIIYSNFNGKEIAVINLQGRTF
EEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCEE
LPPVDDPFRKADELIDEAKLRTNIIFVDFHGEATSEKQAMAWYLDGRVSAVVGTHTHTQT
CCCCCCHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCCEEEEEECCEEEEEEECCCCCCC
ADERILPDGTAYISDVGMTGPYDGILGVERETIMKRFLTSLPVRFEIDKTGRTQLNGVII
CCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEECCCCCEEECEEEE
TIDDTSGRAKNIERIMINEDHPFFS
EEECCCCCCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]