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The map label for this gene is recA

Identifier: 23099079

GI number: 23099079

Start: 1663302

End: 1664345

Strand: Direct

Name: recA

Synonym: OB1624

Alternate gene names: 23099079

Gene position: 1663302-1664345 (Clockwise)

Preceding gene: 23099078

Following gene: 23099080

Centisome position: 45.81

GC content: 38.6

Gene sequence:

>1044_bases
TTGAGTGATAGAAAACAAGCATTAGATATGGCTTTAAGACAAATAGAGAAGCAATTTGGTAAAGGTTCCATTATGAAAAT
GGGGGAGAATGAAATCCCGAAAATCGCTACTATCCCAAGTGGATCATTAGCATTAGATGTTGCCTTAGGTATAGGCGGGT
ATCCTCGTGGTCGTGTAGTTGAAATATATGGTCCAGAGTCCTCAGGTAAAACAACCGTAGCACTTCACGCAATTGCGGAA
GCACAAAAGCAAGGAGGACAAGCTGCGTTTATCGATGCAGAGCATGCGCTTGACCCAGTATATGCGAAAGCTTTAGGTGT
AAATATTGATGAATTACTGTTATCTCAACCAGATACAGGTGAACAAGCATTAGAAATTGCAGAGGCCCTTGTTCGAAGCG
GTGCTGTAGATATTATCGTAGTTGACTCTGTAGCTGCGCTTGTGCCAAAAGCTGAAATTGAAGGTGAAATGGGAGATTCT
CATGTTGGGCTACAAGCACGTTTAATGTCACAAGCATTACGTAAATTATCTGGTGCAATAAATAAGTCGAAAACAACGGC
AATATTTATTAACCAAATCCGTGAAAAAGTCGGAGTTATGTTCGGAAATCCAGAGACAACTCCTGGTGGACGAGCATTAA
AATTCTATTCCTCTGTACGTTTAGAAGTAAGAAGAGCGGAAACATTAAAGCTAGGTAATGATGCAGTCGGAAATAAAGCG
CGAATTAAAGTTGTAAAAAATAAAGTTGCTCCACCGTTTAAACAAGCTGAAGTAGATATTATGTATGGAAAAGGTATTTC
TAAAGAAGGTGAAGTATTAGATATTGGTTCCGATCTAGATATTGTTATGAAAAGTGGTGCATGGTATTCCTATAACAATG
ATCGTCTAGGACAGGGCAGAGAAAATGCGAAACAATATCTAAAAGAACATGAAGAAGTATTAACAGAAATCCATCAGTCT
ATTCGTCAGCATTATGAATTAGACAAGGTGGATGAAGATAAGACGGAAGAAGAAGCTTCTCAAGAGAGTCTTGATTTAAA
ATAG

Upstream 100 bases:

>100_bases
AGTAGATTGTTAAAAAATAAGAACATCCATTCGTTTTTTTCTTGTTAAATAGATAAAAACATTGTATGATAGATACAGAT
ATGTGAAGGAGGTAGTTTCT

Downstream 100 bases:

>100_bases
TCTAGCTTGTACAAAACTCTAAGGTCAAAAGCAATATGACCTTAGGGTTTTTTTATTTTAGTCGATCTCAATATTCAGAA
GAGCTCGCCAACATGGATAT

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A

Number of amino acids: Translated: 347; Mature: 346

Protein sequence:

>347_residues
MSDRKQALDMALRQIEKQFGKGSIMKMGENEIPKIATIPSGSLALDVALGIGGYPRGRVVEIYGPESSGKTTVALHAIAE
AQKQGGQAAFIDAEHALDPVYAKALGVNIDELLLSQPDTGEQALEIAEALVRSGAVDIIVVDSVAALVPKAEIEGEMGDS
HVGLQARLMSQALRKLSGAINKSKTTAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAETLKLGNDAVGNKA
RIKVVKNKVAPPFKQAEVDIMYGKGISKEGEVLDIGSDLDIVMKSGAWYSYNNDRLGQGRENAKQYLKEHEEVLTEIHQS
IRQHYELDKVDEDKTEEEASQESLDLK

Sequences:

>Translated_347_residues
MSDRKQALDMALRQIEKQFGKGSIMKMGENEIPKIATIPSGSLALDVALGIGGYPRGRVVEIYGPESSGKTTVALHAIAE
AQKQGGQAAFIDAEHALDPVYAKALGVNIDELLLSQPDTGEQALEIAEALVRSGAVDIIVVDSVAALVPKAEIEGEMGDS
HVGLQARLMSQALRKLSGAINKSKTTAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAETLKLGNDAVGNKA
RIKVVKNKVAPPFKQAEVDIMYGKGISKEGEVLDIGSDLDIVMKSGAWYSYNNDRLGQGRENAKQYLKEHEEVLTEIHQS
IRQHYELDKVDEDKTEEEASQESLDLK
>Mature_346_residues
SDRKQALDMALRQIEKQFGKGSIMKMGENEIPKIATIPSGSLALDVALGIGGYPRGRVVEIYGPESSGKTTVALHAIAEA
QKQGGQAAFIDAEHALDPVYAKALGVNIDELLLSQPDTGEQALEIAEALVRSGAVDIIVVDSVAALVPKAEIEGEMGDSH
VGLQARLMSQALRKLSGAINKSKTTAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAETLKLGNDAVGNKAR
IKVVKNKVAPPFKQAEVDIMYGKGISKEGEVLDIGSDLDIVMKSGAWYSYNNDRLGQGRENAKQYLKEHEEVLTEIHQSI
RQHYELDKVDEDKTEEEASQESLDLK

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family

Homologues:

Organism=Escherichia coli, GI1789051, Length=321, Percent_Identity=63.2398753894081, Blast_Score=429, Evalue=1e-121,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): RECA_OCEIH (Q8CXG7)

Other databases:

- EMBL:   BA000028
- RefSeq:   NP_692545.1
- ProteinModelPortal:   Q8CXG7
- SMR:   Q8CXG7
- GeneID:   1018119
- GenomeReviews:   BA000028_GR
- KEGG:   oih:OB1624
- NMPDR:   fig|221109.1.peg.1626
- HOGENOM:   HBG339889
- OMA:   GRDNTIT
- ProtClustDB:   PRK09354
- BioCyc:   OIHE221109:OB1624-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00268
- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587
- PANTHER:   PTHR22942:SF1
- PRINTS:   PR00142
- SMART:   SM00382
- TIGRFAMs:   TIGR02012

Pfam domain/function: PF00154 RecA

EC number: NA

Molecular weight: Translated: 37725; Mature: 37594

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: PS00321 RECA_1; PS50162 RECA_2; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDRKQALDMALRQIEKQFGKGSIMKMGENEIPKIATIPSGSLALDVALGIGGYPRGRVV
CCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCEEEECCCCCEEEEEEECCCCCCCCCEE
EIYGPESSGKTTVALHAIAEAQKQGGQAAFIDAEHALDPVYAKALGVNIDELLLSQPDTG
EEECCCCCCCEEEEHHHHHHHHHCCCCEEEEEHHHHCCHHHHHHHCCCHHHHHHCCCCCH
EQALEIAEALVRSGAVDIIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGAI
HHHHHHHHHHHHCCCEEEEEECHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHC
NKSKTTAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAETLKLGNDAVGNKA
CCCCHHHHHHHHHHHHHCEEECCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCC
RIKVVKNKVAPPFKQAEVDIMYGKGISKEGEVLDIGSDLDIVMKSGAWYSYNNDRLGQGR
EEEEEHHCCCCCHHHCCEEEEECCCCCCCCCEEECCCCCEEEEECCCEEEECCCCCCCCH
ENAKQYLKEHEEVLTEIHQSIRQHYELDKVDEDKTEEEASQESLDLK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCC
>Mature Secondary Structure 
SDRKQALDMALRQIEKQFGKGSIMKMGENEIPKIATIPSGSLALDVALGIGGYPRGRVV
CHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCEEEECCCCCEEEEEEECCCCCCCCCEE
EIYGPESSGKTTVALHAIAEAQKQGGQAAFIDAEHALDPVYAKALGVNIDELLLSQPDTG
EEECCCCCCCEEEEHHHHHHHHHCCCCEEEEEHHHHCCHHHHHHHCCCHHHHHHCCCCCH
EQALEIAEALVRSGAVDIIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGAI
HHHHHHHHHHHHCCCEEEEEECHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHC
NKSKTTAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAETLKLGNDAVGNKA
CCCCHHHHHHHHHHHHHCEEECCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCC
RIKVVKNKVAPPFKQAEVDIMYGKGISKEGEVLDIGSDLDIVMKSGAWYSYNNDRLGQGR
EEEEEHHCCCCCHHHCCEEEEECCCCCCCCCEEECCCCCEEEEECCCEEEECCCCCCCCH
ENAKQYLKEHEEVLTEIHQSIRQHYELDKVDEDKTEEEASQESLDLK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12235376