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The map label for this gene is sepF

Identifier: 23098935

GI number: 23098935

Start: 1520107

End: 1520541

Strand: Direct

Name: sepF

Synonym: OB1480

Alternate gene names: 23098935

Gene position: 1520107-1520541 (Clockwise)

Preceding gene: 23098934

Following gene: 23098936

Centisome position: 41.87

GC content: 34.02

Gene sequence:

>435_bases
ATGAGTTTTAAAAATAAATTAAAAGATTATTTTATGGGTGACGAATATGAGTATGAATATGTAGACGAGGATAATCAATC
TGAAGAACCAACACAAAAAGAAGCTAAAGTGAATCCCAAAAATGTGGTTAATTTATCAAGCGTTCAGCAAAGTAATTCTC
GCGTTGTGTTAATTGAACCACGTAATTATAATGAAGCACAAGAGATAGCTGACAATATAGTTAATCGCCGTGCAGTTATT
ATTAATCTGCAGCGAGTAGATCATCAACAAGCAAAACGAATTGTTGATTTCTTAAGTGGTACTGTATATGCTGTCAAAGG
TGATATCCAGAAACTAGGAGCAGAAACATTTTTGTGCACACCAGATAATGTAGAGGTATCAGGTACAATCACTGAAATGT
TGTACGAACAGGAAGAATATGACAAAGGATGGTAA

Upstream 100 bases:

>100_bases
TGAGTAACGATTATCATATTGCTATAGAAGAGGGAGCTACACATGTACGTATTGGATCGAAACTCGTTGGATAGAATTTT
TAAGTAGAGAGGTGAAGGAG

Downstream 100 bases:

>100_bases
CAGCGTATGATGCAAATTTTGAATCTTATTAGTATGGGGATCACAATATATAGCTTTGCTTTATTTATTTATATTATGAT
GTCCTGGATCCCAGGAGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MSFKNKLKDYFMGDEYEYEYVDEDNQSEEPTQKEAKVNPKNVVNLSSVQQSNSRVVLIEPRNYNEAQEIADNIVNRRAVI
INLQRVDHQQAKRIVDFLSGTVYAVKGDIQKLGAETFLCTPDNVEVSGTITEMLYEQEEYDKGW

Sequences:

>Translated_144_residues
MSFKNKLKDYFMGDEYEYEYVDEDNQSEEPTQKEAKVNPKNVVNLSSVQQSNSRVVLIEPRNYNEAQEIADNIVNRRAVI
INLQRVDHQQAKRIVDFLSGTVYAVKGDIQKLGAETFLCTPDNVEVSGTITEMLYEQEEYDKGW
>Mature_143_residues
SFKNKLKDYFMGDEYEYEYVDEDNQSEEPTQKEAKVNPKNVVNLSSVQQSNSRVVLIEPRNYNEAQEIADNIVNRRAVII
NLQRVDHQQAKRIVDFLSGTVYAVKGDIQKLGAETFLCTPDNVEVSGTITEMLYEQEEYDKGW

Specific function: Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of ftsZ protofilaments. Its function overlaps with ftsA

COG id: COG1799

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm. Note=Localizes to the division site, in a ftsZ-dependent manner (By similarity)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sepF family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SEPF_OCEIH (Q8ER44)

Other databases:

- EMBL:   BA000028
- RefSeq:   NP_692401.1
- GeneID:   1017732
- GenomeReviews:   BA000028_GR
- KEGG:   oih:OB1480
- NMPDR:   fig|221109.1.peg.1482
- HOGENOM:   HBG700081
- OMA:   GKANQTE
- BioCyc:   OIHE221109:OB1480-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01197
- InterPro:   IPR023052
- InterPro:   IPR007561

Pfam domain/function: PF04472 DUF552

EC number: NA

Molecular weight: Translated: 16648; Mature: 16516

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFKNKLKDYFMGDEYEYEYVDEDNQSEEPTQKEAKVNPKNVVNLSSVQQSNSRVVLIEP
CCHHHHHHHHHCCCCCCEEECCCCCCCCCCCCHHCCCCHHHEEEHHHHHCCCCEEEEECC
RNYNEAQEIADNIVNRRAVIINLQRVDHQQAKRIVDFLSGTVYAVKGDIQKLGAETFLCT
CCCCHHHHHHHHHHCCEEEEEEHHHCCHHHHHHHHHHHCCCEEEEECCHHHCCCCEEEEC
PDNVEVSGTITEMLYEQEEYDKGW
CCCEEEHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SFKNKLKDYFMGDEYEYEYVDEDNQSEEPTQKEAKVNPKNVVNLSSVQQSNSRVVLIEP
CHHHHHHHHHCCCCCCEEECCCCCCCCCCCCHHCCCCHHHEEEHHHHHCCCCEEEEECC
RNYNEAQEIADNIVNRRAVIINLQRVDHQQAKRIVDFLSGTVYAVKGDIQKLGAETFLCT
CCCCHHHHHHHHHHCCEEEEEEHHHCCHHHHHHHHHHHCCCEEEEECCHHHCCCCEEEEC
PDNVEVSGTITEMLYEQEEYDKGW
CCCEEEHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12235376