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The map label for this gene is rpmF

Identifier: 23098911

GI number: 23098911

Start: 1494765

End: 1494938

Strand: Direct

Name: rpmF

Synonym: OB1456

Alternate gene names: 23098911

Gene position: 1494765-1494938 (Clockwise)

Preceding gene: 23098910

Following gene: 23098912

Centisome position: 41.17

GC content: 40.23

Gene sequence:

>174_bases
ATGGCAGTACCTAAAAGAAGAACTTCCAAAAAAGTAAAGAACCAACGTCGTACGCATAAAAAACTACACGTACCTGGCAT
GGTAGAATGCTCCAATTGTGGAGAATTAACAAAACCACACCGTGTTTGCAAATCATGTGGACACTATGACGGGAAAGAAG
TAGTAAACGGCTAA

Upstream 100 bases:

>100_bases
TCCACGGATGAAGAAACTTGAATCTCTCCTTAAAAATAATCAGAAAGAAAAATAAGAATAGCTATTCAAGTTTTACTTTC
AATTGAAGGAGGTGTAAGTC

Downstream 100 bases:

>100_bases
TAGTGAACAAACAACAGATCACGATACGTGATCTGTTTTATTTTTTTCTAAGAAAACGATTCTAGCACCCCTACTTTTTG
CATACATTGATAGCAAACAT

Product: 50S ribosomal protein L32

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 57; Mature: 56

Protein sequence:

>57_residues
MAVPKRRTSKKVKNQRRTHKKLHVPGMVECSNCGELTKPHRVCKSCGHYDGKEVVNG

Sequences:

>Translated_57_residues
MAVPKRRTSKKVKNQRRTHKKLHVPGMVECSNCGELTKPHRVCKSCGHYDGKEVVNG
>Mature_56_residues
AVPKRRTSKKVKNQRRTHKKLHVPGMVECSNCGELTKPHRVCKSCGHYDGKEVVNG

Specific function: Unknown

COG id: COG0333

COG function: function code J; Ribosomal protein L32

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L32P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL32_OCEIH (Q8ER59)

Other databases:

- EMBL:   BA000028
- RefSeq:   NP_692377.1
- ProteinModelPortal:   Q8ER59
- SMR:   Q8ER59
- GeneID:   1017698
- GenomeReviews:   BA000028_GR
- KEGG:   oih:OB1456
- NMPDR:   fig|221109.1.peg.1458
- HOGENOM:   HBG728381
- OMA:   MAKHPVP
- BioCyc:   OIHE221109:OB1456-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00340
- InterPro:   IPR002677
- InterPro:   IPR011332
- TIGRFAMs:   TIGR01031

Pfam domain/function: PF01783 Ribosomal_L32p; SSF57829 Ribosomal_zn-bd

EC number: NA

Molecular weight: Translated: 6445; Mature: 6313

Theoretical pI: Translated: 10.73; Mature: 10.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
10.5 %Cys+Met (Translated Protein)
7.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
8.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVPKRRTSKKVKNQRRTHKKLHVPGMVECSNCGELTKPHRVCKSCGHYDGKEVVNG
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHCCCC
>Mature Secondary Structure 
AVPKRRTSKKVKNQRRTHKKLHVPGMVECSNCGELTKPHRVCKSCGHYDGKEVVNG
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12235376