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The map label for this gene is ywbD [H]

Identifier: 23097913

GI number: 23097913

Start: 482981

End: 484162

Strand: Direct

Name: ywbD [H]

Synonym: OB0458

Alternate gene names: 23097913

Gene position: 482981-484162 (Clockwise)

Preceding gene: 23097912

Following gene: 23097914

Centisome position: 13.3

GC content: 35.11

Gene sequence:

>1182_bases
ATGAAAAAATTAAAAGTTAAGCAAAACTATGTGAAGAACTTTAAAAACCAGACCCCGTTAATTTTAAGTGAAGCGGTAGA
TAATACGAAACAACTTAATGAAGGAGAAATTATTGAATTAGTAGATCCTCGTGGAGGTTTCTTAGGAAAAGGGTATGTTG
GTTTTCAAAATAAAGGAATGGGTTGGGTACTAACATTTAAAGAGAACCAACCGATTGACCAGGTACTATTTAAACAAAAG
ATACTTACTGCATTAAACAAACGTACCTCTTATTATCAGGATGAAATGACAAATGCTTTTCGTATTTTTAATGGAGAGGG
AGATGGCATAGGTGGCCTAATCATTGATTATTTTGACGGATATTACGTCATTCAGTGGTACAGTGAAGGCATCTATCAAT
TTAAAGAATGGGTACTAGAAGTGTTTGAAGAACTTGGTGATTATCGAGCAATTTACGAAAAGAAACGCTTTGATACCAAG
GGTAAGTATATTAATGATGATGACTTTGTAAGAGGAGAGCGTGGGGAGTTTCCGATTATCGTGCAAGAAAATGGGATGAA
CTATGCTGTTTATTTAAACGATGGTGCTATGGTAGGAATCTTTCTTGATCAGCGTGATGTACGAAAAGCCTTAAGAGATA
AGTATGCATGGGACAAGCATGTATTAAATACATTTTCGTATACGGGTGCTTTTTCCGTAGCTGCAGCTTTAGGAGGAGCG
AACAAAACGACTAGTGTTGACTTAGCGAAGCGTAGTAAGGCTAAAACGATTGAGCAGTTCAGTGTAAATGGAATTGATTT
TGAGCAGCAAGATATTATTGTAATGGATGTGTTTGATTACTTTAATTATGCGAAGCGAAAAAACCTTCGTTTTGATGTCG
TAGTGCTTGATCCTCCAAGTTTTGCAAGATCCAAAAAACGTACATTTCGAACAGCAAAGGATTACCCAGAATTAATTAAG
AATTCCATTGATATAGTAGAAAAAGATGGAATGATTATTGCGTCTACTAATACGGCATCGTTTGGTATGAAAAAATTTAA
AGAAATGATTGATCGAGGGTTTAAGGATAAAAATAAAAAATACACTATAGTCGAGGAATTCACACTACCTGGAGATTTCA
TGGTGAATAATCGTTATAAACAAGGTGATTATCTGAAAGTGGTAGTACTGCAATTGAAATAG

Upstream 100 bases:

>100_bases
AATGATGAAATAGATCATAAAGGGATATTGCGTGACACATGCGTTTATTCAAAAATAAAATTATAAAGAGTTTCCTTTAA
AGGAAAGATAGGATGACAAT

Downstream 100 bases:

>100_bases
ACAGGAGAAATTATTCTTGACTAATATGCAGGATTTAGAAAAGAAGATGCAAGAAGTATGTAGACGCTAATAAATGGTAA
AAATTTACATTTTTTAAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
MKKLKVKQNYVKNFKNQTPLILSEAVDNTKQLNEGEIIELVDPRGGFLGKGYVGFQNKGMGWVLTFKENQPIDQVLFKQK
ILTALNKRTSYYQDEMTNAFRIFNGEGDGIGGLIIDYFDGYYVIQWYSEGIYQFKEWVLEVFEELGDYRAIYEKKRFDTK
GKYINDDDFVRGERGEFPIIVQENGMNYAVYLNDGAMVGIFLDQRDVRKALRDKYAWDKHVLNTFSYTGAFSVAAALGGA
NKTTSVDLAKRSKAKTIEQFSVNGIDFEQQDIIVMDVFDYFNYAKRKNLRFDVVVLDPPSFARSKKRTFRTAKDYPELIK
NSIDIVEKDGMIIASTNTASFGMKKFKEMIDRGFKDKNKKYTIVEEFTLPGDFMVNNRYKQGDYLKVVVLQLK

Sequences:

>Translated_393_residues
MKKLKVKQNYVKNFKNQTPLILSEAVDNTKQLNEGEIIELVDPRGGFLGKGYVGFQNKGMGWVLTFKENQPIDQVLFKQK
ILTALNKRTSYYQDEMTNAFRIFNGEGDGIGGLIIDYFDGYYVIQWYSEGIYQFKEWVLEVFEELGDYRAIYEKKRFDTK
GKYINDDDFVRGERGEFPIIVQENGMNYAVYLNDGAMVGIFLDQRDVRKALRDKYAWDKHVLNTFSYTGAFSVAAALGGA
NKTTSVDLAKRSKAKTIEQFSVNGIDFEQQDIIVMDVFDYFNYAKRKNLRFDVVVLDPPSFARSKKRTFRTAKDYPELIK
NSIDIVEKDGMIIASTNTASFGMKKFKEMIDRGFKDKNKKYTIVEEFTLPGDFMVNNRYKQGDYLKVVVLQLK
>Mature_393_residues
MKKLKVKQNYVKNFKNQTPLILSEAVDNTKQLNEGEIIELVDPRGGFLGKGYVGFQNKGMGWVLTFKENQPIDQVLFKQK
ILTALNKRTSYYQDEMTNAFRIFNGEGDGIGGLIIDYFDGYYVIQWYSEGIYQFKEWVLEVFEELGDYRAIYEKKRFDTK
GKYINDDDFVRGERGEFPIIVQENGMNYAVYLNDGAMVGIFLDQRDVRKALRDKYAWDKHVLNTFSYTGAFSVAAALGGA
NKTTSVDLAKRSKAKTIEQFSVNGIDFEQQDIIVMDVFDYFNYAKRKNLRFDVVVLDPPSFARSKKRTFRTAKDYPELIK
NSIDIVEKDGMIIASTNTASFGMKKFKEMIDRGFKDKNKKYTIVEEFTLPGDFMVNNRYKQGDYLKVVVLQLK

Specific function: Unknown

COG id: COG1092

COG function: function code R; Predicted SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PUA domain [H]

Homologues:

Organism=Escherichia coli, GI145693111, Length=389, Percent_Identity=27.2493573264781, Blast_Score=166, Evalue=2e-42,
Organism=Escherichia coli, GI1787181, Length=174, Percent_Identity=33.9080459770115, Blast_Score=89, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002478
- InterPro:   IPR015947
- InterPro:   IPR019614 [H]

Pfam domain/function: PF10672 Methyltrans_SAM [H]

EC number: NA

Molecular weight: Translated: 45463; Mature: 45463

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: PS50890 PUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLKVKQNYVKNFKNQTPLILSEAVDNTKQLNEGEIIELVDPRGGFLGKGYVGFQNKGM
CCCCCHHHHHHHHHCCCCCEEEHHHHCHHHCCCCCCEEEEECCCCCCCCCCEECCCCCCC
GWVLTFKENQPIDQVLFKQKILTALNKRTSYYQDEMTNAFRIFNGEGDGIGGLIIDYFDG
EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEECCC
YYVIQWYSEGIYQFKEWVLEVFEELGDYRAIYEKKRFDTKGKYINDDDFVRGERGEFPII
EEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEE
VQENGMNYAVYLNDGAMVGIFLDQRDVRKALRDKYAWDKHVLNTFSYTGAFSVAAALGGA
EEECCCEEEEEECCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC
NKTTSVDLAKRSKAKTIEQFSVNGIDFEQQDIIVMDVFDYFNYAKRKNLRFDVVVLDPPS
CCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHCCCEEEEEEECCCH
FARSKKRTFRTAKDYPELIKNSIDIVEKDGMIIASTNTASFGMKKFKEMIDRGFKDKNKK
HHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCE
YTIVEEFTLPGDFMVNNRYKQGDYLKVVVLQLK
EEEEEEEECCCCEEECCCCCCCCEEEEEEEEEC
>Mature Secondary Structure
MKKLKVKQNYVKNFKNQTPLILSEAVDNTKQLNEGEIIELVDPRGGFLGKGYVGFQNKGM
CCCCCHHHHHHHHHCCCCCEEEHHHHCHHHCCCCCCEEEEECCCCCCCCCCEECCCCCCC
GWVLTFKENQPIDQVLFKQKILTALNKRTSYYQDEMTNAFRIFNGEGDGIGGLIIDYFDG
EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEECCC
YYVIQWYSEGIYQFKEWVLEVFEELGDYRAIYEKKRFDTKGKYINDDDFVRGERGEFPII
EEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEE
VQENGMNYAVYLNDGAMVGIFLDQRDVRKALRDKYAWDKHVLNTFSYTGAFSVAAALGGA
EEECCCEEEEEECCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC
NKTTSVDLAKRSKAKTIEQFSVNGIDFEQQDIIVMDVFDYFNYAKRKNLRFDVVVLDPPS
CCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHCCCEEEEEEECCCH
FARSKKRTFRTAKDYPELIKNSIDIVEKDGMIIASTNTASFGMKKFKEMIDRGFKDKNKK
HHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCE
YTIVEEFTLPGDFMVNNRYKQGDYLKVVVLQLK
EEEEEEEECCCCEEECCCCCCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]