Click here to switch to the map view.

The map label for this gene is yrbG [H]

Identifier: 23097898

GI number: 23097898

Start: 469496

End: 470452

Strand: Direct

Name: yrbG [H]

Synonym: OB0443

Alternate gene names: 23097898

Gene position: 469496-470452 (Clockwise)

Preceding gene: 23097897

Following gene: 23097907

Centisome position: 12.93

GC content: 34.9

Gene sequence:

>957_bases
GTGGAGTATGTTTGGTTGGTAGTAGGATTTGCACTATTAGTTAAAGGAGCGGACTGGTTTGTGGATGGTTCTTCTAATAT
TGCAAAACTACTCCGGGTACCACCGATATTAATTGGGTTAACAATTGTTGCTCTAGGGACGAGCTCACCCGAAGCTACTG
TTAGTATTATTGCTGCATTAGAAGGAACTGCAGATGTGTCCATTGGTAATGTTATTGGGAGTAATATTTTTAATATTACA
CTCACAGTTGGCTTGGCAGCTTTTATTTTCCCGCTTCAAGTACAAAATGAGACAATAAAAAAAGAAATCCCATTTACGTT
ACTCGCGAGTGTTGCTTTACTTGTACTTATGTCTGACATTTTTCTTCAAGGCTTATCTTCGAATATGATTACAAGAAGTG
ATGGGGTTATCCTGTTACTATTCTTAACTATTTTTATGTACTATATTATCGAAGTGGGCTTAAAAAGTCGGAAAGAATCA
CGTGAAGAAGAGATATCGAATGAAGATATTTCGTGGGGGAAAAATGGTCTTATTACGATTATTGGTTTAGCTGGAATCAT
TGGTGGAGGACAACTTGTTGTCACAAATGCTACTGAAATTGCTTATTCACTAGGGATGAGTGAAACACTTGTTGGTTTGA
CAATAGTTGCAATTGGAACTTCACTACCGGAATTAGTTACGTCTATATCGGCAGCGTTGAAAAAAGAAAGTGAAATAGCA
CTTGGTAATATTGTTGGAAGTAATATCTTTAACATTTTATTTGTGTTAGGTGCATCATCAGTAATTACCCCGCTTGCGAT
AAATGAAAAGATATTTACAGATATTTGGCTTATGATCATCTTAACTATCTTACTTCTCATTTTCTCAAGAACGAAATATC
GAATTGGAAGAAAAGAAGGATTAATTTTAGCATTATTTTACATTGCCTATATGGTATTTATCATTATTCGAAATTAA

Upstream 100 bases:

>100_bases
TACGATTTTATTAAGTAGTGAACAATAGAAAATGGACGCAGTATTCATAAGAAGATAGAATGGATACAAAGAACTTTTTA
AAATCGAAAGGGTGGAAAAC

Downstream 100 bases:

>100_bases
AGCTGACCTTATAAGAAACTATGTCTTAAAAGACAAATGATAGCTAAAATTATCGACGCAGCAGACTAAGGCAGCAGGTA
AGATTCCCGGTGTATAAGCA

Product: hypothetical protein

Products: Na (I) [Cytoplasm]; Ca (II) [Periplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MEYVWLVVGFALLVKGADWFVDGSSNIAKLLRVPPILIGLTIVALGTSSPEATVSIIAALEGTADVSIGNVIGSNIFNIT
LTVGLAAFIFPLQVQNETIKKEIPFTLLASVALLVLMSDIFLQGLSSNMITRSDGVILLLFLTIFMYYIIEVGLKSRKES
REEEISNEDISWGKNGLITIIGLAGIIGGGQLVVTNATEIAYSLGMSETLVGLTIVAIGTSLPELVTSISAALKKESEIA
LGNIVGSNIFNILFVLGASSVITPLAINEKIFTDIWLMIILTILLLIFSRTKYRIGRKEGLILALFYIAYMVFIIIRN

Sequences:

>Translated_318_residues
MEYVWLVVGFALLVKGADWFVDGSSNIAKLLRVPPILIGLTIVALGTSSPEATVSIIAALEGTADVSIGNVIGSNIFNIT
LTVGLAAFIFPLQVQNETIKKEIPFTLLASVALLVLMSDIFLQGLSSNMITRSDGVILLLFLTIFMYYIIEVGLKSRKES
REEEISNEDISWGKNGLITIIGLAGIIGGGQLVVTNATEIAYSLGMSETLVGLTIVAIGTSLPELVTSISAALKKESEIA
LGNIVGSNIFNILFVLGASSVITPLAINEKIFTDIWLMIILTILLLIFSRTKYRIGRKEGLILALFYIAYMVFIIIRN
>Mature_318_residues
MEYVWLVVGFALLVKGADWFVDGSSNIAKLLRVPPILIGLTIVALGTSSPEATVSIIAALEGTADVSIGNVIGSNIFNIT
LTVGLAAFIFPLQVQNETIKKEIPFTLLASVALLVLMSDIFLQGLSSNMITRSDGVILLLFLTIFMYYIIEVGLKSRKES
REEEISNEDISWGKNGLITIIGLAGIIGGGQLVVTNATEIAYSLGMSETLVGLTIVAIGTSLPELVTSISAALKKESEIA
LGNIVGSNIFNILFVLGASSVITPLAINEKIFTDIWLMIILTILLLIFSRTKYRIGRKEGLILALFYIAYMVFIIIRN

Specific function: Unknown

COG id: COG0530

COG function: function code P; Ca2+/Na+ antiporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium/potassium/calcium exchanger family [H]

Homologues:

Organism=Escherichia coli, GI1789587, Length=306, Percent_Identity=34.3137254901961, Blast_Score=145, Evalue=4e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004481
- InterPro:   IPR004837 [H]

Pfam domain/function: PF01699 Na_Ca_ex [H]

EC number: NA

Molecular weight: Translated: 34303; Mature: 34303

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYVWLVVGFALLVKGADWFVDGSSNIAKLLRVPPILIGLTIVALGTSSPEATVSIIAAL
CCCHHHHHHHHHHHCCCCEEEECCHHHHHHHHCCHHHHHHHHHEECCCCCHHHHHHEEEC
EGTADVSIGNVIGSNIFNITLTVGLAAFIFPLQVQNETIKKEIPFTLLASVALLVLMSDI
CCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHH
FLQGLSSNMITRSDGVILLLFLTIFMYYIIEVGLKSRKESREEEISNEDISWGKNGLITI
HHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEE
IGLAGIIGGGQLVVTNATEIAYSLGMSETLVGLTIVAIGTSLPELVTSISAALKKESEIA
EEHHHHCCCCEEEEECHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHH
LGNIVGSNIFNILFVLGASSVITPLAINEKIFTDIWLMIILTILLLIFSRTKYRIGRKEG
HHHHHHHHHHHHHHHHCCHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCC
LILALFYIAYMVFIIIRN
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEYVWLVVGFALLVKGADWFVDGSSNIAKLLRVPPILIGLTIVALGTSSPEATVSIIAAL
CCCHHHHHHHHHHHCCCCEEEECCHHHHHHHHCCHHHHHHHHHEECCCCCHHHHHHEEEC
EGTADVSIGNVIGSNIFNITLTVGLAAFIFPLQVQNETIKKEIPFTLLASVALLVLMSDI
CCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHH
FLQGLSSNMITRSDGVILLLFLTIFMYYIIEVGLKSRKESREEEISNEDISWGKNGLITI
HHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEE
IGLAGIIGGGQLVVTNATEIAYSLGMSETLVGLTIVAIGTSLPELVTSISAALKKESEIA
EEHHHHCCCCEEEEECHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHH
LGNIVGSNIFNILFVLGASSVITPLAINEKIFTDIWLMIILTILLLIFSRTKYRIGRKEG
HHHHHHHHHHHHHHHHCCHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCC
LILALFYIAYMVFIIIRN
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; Ca (II) [Cytoplasm] [C]

Specific reaction: Na (I) [Periplasm] + Ca (II) [Cytoplasm] = Na (I) [Cytoplasm] + Ca (II) [Periplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]