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The map label for this gene is nolA [H]

Identifier: 23097880

GI number: 23097880

Start: 451725

End: 452558

Strand: Direct

Name: nolA [H]

Synonym: OB0425

Alternate gene names: 23097880

Gene position: 451725-452558 (Clockwise)

Preceding gene: 23097876

Following gene: 23097881

Centisome position: 12.44

GC content: 32.85

Gene sequence:

>834_bases
ATGACAAAAGATATCTTCTCCGTAAGTGAGTTTGCTCAATATACAGGGTTATCGATACGAACGTTGCATTATTATGAAGA
AAAAGGGATATTACATCCTCTAAGAGATAAGGATACAGGACATCGTAGATATGTAAAAGAAGATTTGCTTCAGCTACATC
AAATAGTCACACTAAAATTTTTAGGTTTTACTCTAGAAGAAATTAAGGATATTACAATGTCAACAAGTGTTGATTTAAGT
TTTATTGAAACATTAAGGTTACAAGAAGCGAAATTAGTAGAAGATAAAGAAAAAATTGAAGTGTCTTTGGAAATGATTAA
AAGAACCGTAAAACTTATTGAAGATGAAAAACAAATTGACAAGGATATGTTAGTAAGCTTACTCGCGAGTATGCAAACTG
AAAAACAGCAGAAAGAAATTTCCAAAGGTATTTTGTCGGATCAAGCGATTGATCAATTATTTAGAGCAACAGATAGTGAG
AAATTACTATGGGAAAAAGAAATATTACGATTTTATAAAGAAACGAAGCGGTTAGTAGGCAGGTCAAGTGATGACCCGGA
AGTAATGAAGTTGTTTCAACGTTTTTTTACGTATGTGCTAGATATATTTAAAATGGAAGGCTTTCATGAGCTTGAAAATA
TACTGAAATCAAAAAAAGCGGAGGACATTAGTGATGAAGAGTTGGATCGGTTTATCTTAGAAATGGAGAAGTTAGTTCCG
AACCCATTAACAAAGGAGGAGGTACAATGGTTAGATGGAATAATGACAACATATATGACAGAAAACAGCGATTTTTGGAA
GGGAGTAGTAAGGAATGGAAAAAGGTCAACGTAA

Upstream 100 bases:

>100_bases
TTGCATGAGCAAAAGCAAAGTTTTTTTATGAGCTCAAATAAAAAACTTGCGCCTAACGTTACGTAAGGTGATATGATTTT
CTTAGGAAAGGGGATCATTC

Downstream 100 bases:

>100_bases
TAATAAGGCATTTTTATCTTTAATTTTAACAGCGAATATCCCAAAGTTTGTTCTTGCTTTAGGGTTAATTGGAAGTATCA
TAACGACATTGGTGGGGCTT

Product: transcriptional activator of multidrug-efflux transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 276

Protein sequence:

>277_residues
MTKDIFSVSEFAQYTGLSIRTLHYYEEKGILHPLRDKDTGHRRYVKEDLLQLHQIVTLKFLGFTLEEIKDITMSTSVDLS
FIETLRLQEAKLVEDKEKIEVSLEMIKRTVKLIEDEKQIDKDMLVSLLASMQTEKQQKEISKGILSDQAIDQLFRATDSE
KLLWEKEILRFYKETKRLVGRSSDDPEVMKLFQRFFTYVLDIFKMEGFHELENILKSKKAEDISDEELDRFILEMEKLVP
NPLTKEEVQWLDGIMTTYMTENSDFWKGVVRNGKRST

Sequences:

>Translated_277_residues
MTKDIFSVSEFAQYTGLSIRTLHYYEEKGILHPLRDKDTGHRRYVKEDLLQLHQIVTLKFLGFTLEEIKDITMSTSVDLS
FIETLRLQEAKLVEDKEKIEVSLEMIKRTVKLIEDEKQIDKDMLVSLLASMQTEKQQKEISKGILSDQAIDQLFRATDSE
KLLWEKEILRFYKETKRLVGRSSDDPEVMKLFQRFFTYVLDIFKMEGFHELENILKSKKAEDISDEELDRFILEMEKLVP
NPLTKEEVQWLDGIMTTYMTENSDFWKGVVRNGKRST
>Mature_276_residues
TKDIFSVSEFAQYTGLSIRTLHYYEEKGILHPLRDKDTGHRRYVKEDLLQLHQIVTLKFLGFTLEEIKDITMSTSVDLSF
IETLRLQEAKLVEDKEKIEVSLEMIKRTVKLIEDEKQIDKDMLVSLLASMQTEKQQKEISKGILSDQAIDQLFRATDSEK
LLWEKEILRFYKETKRLVGRSSDDPEVMKLFQRFFTYVLDIFKMEGFHELENILKSKKAEDISDEELDRFILEMEKLVPN
PLTKEEVQWLDGIMTTYMTENSDFWKGVVRNGKRST

Specific function: Involved in genotype-specific nodulation of soybeans [H]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR015358 [H]

Pfam domain/function: PF00376 MerR; PF09278 MerR-DNA-bind [H]

EC number: NA

Molecular weight: Translated: 32695; Mature: 32564

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: PS00552 HTH_MERR_1 ; PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKDIFSVSEFAQYTGLSIRTLHYYEEKGILHPLRDKDTGHRRYVKEDLLQLHQIVTLKF
CCCHHHHHHHHHHHCCCCHHEEHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LGFTLEEIKDITMSTSVDLSFIETLRLQEAKLVEDKEKIEVSLEMIKRTVKLIEDEKQID
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KDMLVSLLASMQTEKQQKEISKGILSDQAIDQLFRATDSEKLLWEKEILRFYKETKRLVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
RSSDDPEVMKLFQRFFTYVLDIFKMEGFHELENILKSKKAEDISDEELDRFILEMEKLVP
CCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC
NPLTKEEVQWLDGIMTTYMTENSDFWKGVVRNGKRST
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCC
>Mature Secondary Structure 
TKDIFSVSEFAQYTGLSIRTLHYYEEKGILHPLRDKDTGHRRYVKEDLLQLHQIVTLKF
CCHHHHHHHHHHHCCCCHHEEHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LGFTLEEIKDITMSTSVDLSFIETLRLQEAKLVEDKEKIEVSLEMIKRTVKLIEDEKQID
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KDMLVSLLASMQTEKQQKEISKGILSDQAIDQLFRATDSEKLLWEKEILRFYKETKRLVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
RSSDDPEVMKLFQRFFTYVLDIFKMEGFHELENILKSKKAEDISDEELDRFILEMEKLVP
CCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC
NPLTKEEVQWLDGIMTTYMTENSDFWKGVVRNGKRST
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7949325 [H]