Definition | Pseudomonas fluorescens Pf-5 chromosome, complete genome. |
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Accession | NC_004129 |
Length | 7,074,893 |
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Identifier: 70729435
GI number:
Start: 2283972
End: 2287316
Strand: Reverse
Name: Not Available
Synonym: PFL_2061
Alternate gene names: NA
Gene position: NA
Preceding gene: 70729436
Following gene: 70729428
Centisome position: NA
GC content: NA
Gene sequence:
>3345_bases GTGCCACGCCGCAGCGCCATGAGTATCCCGCACCCGACGAATGACTCAGCTCAAGGCCTGACCTCCATGCCCAAACCCGC TGACCGTATTCCGCCCTTGCCGCGTATCCATGCTGTCGACCCCCGGGAGTCGGAGCAAAGCTGGGAAAACGCACCGCAGC TGCTCGCCGCCCTCAATGGTGCGCGCCTGGGGGCCTGGTATTGGGATATTGAAAGCGGGCAGATCAGTTGGTCCCGGGGC ACCCAGGCGCTGTTCGGCTTCGACCCGCGCCAGCCCTTGCCGGAAAACCTCGAATACCTCGACCTGCTGCCCATCGAGGA CCGGGCCAGGACGATTCGCGCCTTTCATTCAGTGCTGGCCGGCGCGCCGCTGGAACACGCCATGCACCACCGCATCCGCT GGCCCGACGGCAGCCTGCACTGGCTGGAGATCAACGGCAGCGTGTTACCGGACAAGCACGGCAAGCCGCGAATGATCGGG GTGATCCGCGAGATCACCCACCAGCGCCAACGCGAAGAAGCCCTCAGCAGTTCGGAAAAGCGCTTTGCCACGCTGTTTCA CCTGTGCCCCAACACCGTGCTGCTGACCCGCCTGGAAGATGGCCTGATCAGCGAGGCCAACCAGTACTTCGAAAGCCAGT TCGGCTGGCCCGCCGAGCACGTGATCGGCCGTACCACCCTGGAGATCGGCCTGTGGGTCAACCCCGAACAGCGCGCCCAA CTGATCAAGGCGGTCCAGAAGAAGGGCCAGGCCGCCAGCCTCGAAGTGCAATTTCGCGCCAGCAACGGGCAGATCCATGA CGGCATCCTCAGTGCCCAGAAGGTTGAACTGGAGGGCAAGGCCTACCTGCTCAGCACCTTTCTCGACACCAGCGAGCGCA AACGATCCGAACAGGCGCTCAAGGACAGCCAGGAACGCCTGGACCTGGCCCTGGATTCGGCGCAACTGGGCACCTGGGAC TGGCACATTCCCAGCGGCATGCTCTACGGCTCGGCCCGCGCCGCGCAATTGCATGGCCTGGAACCCATCCCCTTCCATGA ATCCTTCGACGCCTTCTTCGAAGGCGTACCCACCGAAGAGCGCAACTCCATGCGCGATGCCTACCGCAGCCTGCGCGAAG GCCCGGCGGGCAACTATCAACTGACCTACCGGGTGCAACTGGAGGACGGCAGCTCGCGCTACCTGGAAAGCCGCGCCCGC CTCTACCGCGACGAACAGGGCAGCCCGCTGCGCATGGCCGGCACTCTGCTGGACATCACCGAGCAGGTGGAACGGGAACA GCGCCTGATCACCTCCGAAGAGAAATTCGCCAGCCTGTTCCAGGTCAGCCCCGACCCAATCTGCGTGACCTTGCTGGAAA CCGGTCAGTTCATCGAGATCAACTCCAGCTTCACCCAGACCTTCGGCTGGACCCTGGACGAAGTACTAAACCGCAGCGCC GAACAGATCGGCCTTTGGGAAGACGCCGCGCCGCGCCTGCGGCGCATCGAGCAGGTGATTCGTGAACAGGCGCTGAATAA TGTGGCAGTGGTGGTCCACCACAAGAACGGCCAGCCGCTGACCTGCATCATTTCCAGCCGCCTGATCACCGTGGACAAGC AGCCCTGCATCGTCACCAACCTGCGGGACATCACCCAGCAGCAGCGCTCGGAGGCGGCCCTCAAGGCCAGCGAAGAGAAG TTCGCCAAGGCCTTTCACTCCAGCCCTGATGCCATCAGCATCACCGAGCGCGACACGGGCCGCTATCTGGAAGTCAACGA TGGTTTCTGCCGCCTGACCGGCCACCGCAACGACGAGGTGATCGGCCGCACCATGTACCAGATCGGCATCTGGGCCGAAG AAGCGCAACTCTCCACCTTGCTGGCGGAGCTCCAGATCAAGGGCCGGGTGCACCACCTGGAAATGCTCGGGCGCAACAAG CGCGGGGAAATCCTTACCCTGGAAGTCTCGGTGGAACCCATCACTCTCAACGAAACGCCCTGCCTGCTAATGACCGCCCG GGACGTCAGCCTGCTGAAGAACGCCCAGGCACAGATCCGCCACCTGGCTTACCACGACCCCCTGACCAACCTGCCCAACC GCGCCCTGCTGATGGACCGCCTGAGCCAGCAGATTGCCCTGCTCAAGCGTCATAACCTGCGCGGTGCCCTACTGTTTCTC GACCTCGATCACTTCAAGCACATCAACGACTCCCTGGGCCACCCGGTGGGCGACACCGTGTTGAAAATCATCACCGCCCG GCTCGAAGCCAGCGTGCGCATGGAAGACACCGTGGCACGCCTGGGCGGCGATGAGTTCGTGGTCCTGCTGAGTGGCCTTG AGGGCACGCGCAACGAAGTCAGCGAACAGGTCCGCCAGTTGGCCGACACCCTACGCGAACTGCTGTCCGAACCGATGTTC CTCGATGGCCAGCGCCTGCAGGTCACCCCGAGCATCGGTGTGGCACTGATTCCCGACCACGGCTCGACCCCCACCGACCT GCTCAAGCGCGCCGACATCGCCCTTTATCGGGCCAAGGATTCAGGGCGCAACACCACCCAGATGTTCCACAACACCATGC AAAAAGCCGCCAGCGAACGCCTGCGCATGGAAACCGACCTGCGCCTGGCCCTGTCCCGGGGCGAATTCAGCGTGCACTTC CAGCCCCAGGTGGACGCCCGCGACAACCGCATCGTCGGCGCCGAAGCCTTGGTGCGCTGGCAACACCCGGAGTTGGGCGC ACAGTCGCCGACCGAGTTCATCAAGGTGCTGGAGGACAGCGGCCTGATCCTCGAAGTGGGCACCTGGATTCTCGACGAGG CCTGCCTGGCCTTCAGCCAGTTGATCGATCAGAAACTGGTGGATCCCCAGCACTTCAGCCTGTGCGTCAACATCAGCCCG CGGCAGTTCCGCCAGACCGACTTTGTCGAGCGGGTCGAACACAGCCTGCACGCCTACGCACTGCCCTCGAGCCTGCTGAA GCTGGAGATCACCGAAGGCATCGTGATCCAGAACCTGGAAGACACCATCAACAAGATGCGCCGGCTGAAGAAACTCGGAG TGAGCTTTGCCATGGACGACTTCGGCACCGGCTACTCGTCCCTGACCTACCTCAAGCGCTTGCCGGTGGACACCTTGAAG ATCGACCAGTCCTTCGTCCGCGATGCGACCCACGACCCCAACGATGCGGAAATCATCCGGGCCATTGTCGCCATGGCCCG CAGCCTGAACCTCAAGGTCATCGCCGAAGGCGTGGAAACCCCGCAGCAGCTCGAATTCCTCCAGGGCCTGGAGTGCCACC TGTACCAGGGTTTCCTCCATAGCAGGCCGTTGCCGCTGAGCGAATTCAAGAAGCTGCTGGAATGA
Upstream 100 bases:
>100_bases CCGAACGGACACTTTCGAACGCTGCGCGGGCTTTCATGGCCTTACTGGATGCACAAGTCGATTGGCCAGGGAACCCGGCA TAACACTCCGGGTATCGCCC
Downstream 100 bases:
>100_bases CAGGCACGAAAAAGGGCGCCACCAGGGCGCCCTTTTTTTGCAGCGGTCTTAGTGTTGCAGAGCCGCCTGCTGCGCACCGT TGATCGGGATGCGCTTGGCT
Product: sensory box protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1114_residues MPRRSAMSIPHPTNDSAQGLTSMPKPADRIPPLPRIHAVDPRESEQSWENAPQLLAALNGARLGAWYWDIESGQISWSRG TQALFGFDPRQPLPENLEYLDLLPIEDRARTIRAFHSVLAGAPLEHAMHHRIRWPDGSLHWLEINGSVLPDKHGKPRMIG VIREITHQRQREEALSSSEKRFATLFHLCPNTVLLTRLEDGLISEANQYFESQFGWPAEHVIGRTTLEIGLWVNPEQRAQ LIKAVQKKGQAASLEVQFRASNGQIHDGILSAQKVELEGKAYLLSTFLDTSERKRSEQALKDSQERLDLALDSAQLGTWD WHIPSGMLYGSARAAQLHGLEPIPFHESFDAFFEGVPTEERNSMRDAYRSLREGPAGNYQLTYRVQLEDGSSRYLESRAR LYRDEQGSPLRMAGTLLDITEQVEREQRLITSEEKFASLFQVSPDPICVTLLETGQFIEINSSFTQTFGWTLDEVLNRSA EQIGLWEDAAPRLRRIEQVIREQALNNVAVVVHHKNGQPLTCIISSRLITVDKQPCIVTNLRDITQQQRSEAALKASEEK FAKAFHSSPDAISITERDTGRYLEVNDGFCRLTGHRNDEVIGRTMYQIGIWAEEAQLSTLLAELQIKGRVHHLEMLGRNK RGEILTLEVSVEPITLNETPCLLMTARDVSLLKNAQAQIRHLAYHDPLTNLPNRALLMDRLSQQIALLKRHNLRGALLFL DLDHFKHINDSLGHPVGDTVLKIITARLEASVRMEDTVARLGGDEFVVLLSGLEGTRNEVSEQVRQLADTLRELLSEPMF LDGQRLQVTPSIGVALIPDHGSTPTDLLKRADIALYRAKDSGRNTTQMFHNTMQKAASERLRMETDLRLALSRGEFSVHF QPQVDARDNRIVGAEALVRWQHPELGAQSPTEFIKVLEDSGLILEVGTWILDEACLAFSQLIDQKLVDPQHFSLCVNISP RQFRQTDFVERVEHSLHAYALPSSLLKLEITEGIVIQNLEDTINKMRRLKKLGVSFAMDDFGTGYSSLTYLKRLPVDTLK IDQSFVRDATHDPNDAEIIRAIVAMARSLNLKVIAEGVETPQQLEFLQGLECHLYQGFLHSRPLPLSEFKKLLE
Sequences:
NA
Specific function: NA
COG id: COG5001
COG function: function code T; Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA