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The map label for this gene is yhgF [H]

Identifier: 22127783

GI number: 22127783

Start: 4368216

End: 4370591

Strand: Reverse

Name: yhgF [H]

Synonym: y3913

Alternate gene names: 22127783

Gene position: 4370591-4368216 (Counterclockwise)

Preceding gene: 22127788

Following gene: 22127782

Centisome position: 95.0

GC content: 54.17

Gene sequence:

>2376_bases
ATGAATGAACCACTGAGCCGCATTATTGCAAGCGAACTGCAGGCCCGGCCGGAGCAAGTTATCTCCGCTATCCGCCTGCT
TGATGAAGGTAATACCGTGCCCTTTATTTCACGGTATCGTAAGGAAGTTACCGGCGGGTTAGATGATATCCAACTGCGTC
AGTTGGAAAGCCGTCTGGGGTATCTGCGTGAATTAGAAGATCGCCGCCAAACCATTCTTAAATCAATTGAAGATCAAGGA
AAACTCACCGACCAGCTGGCCGGGGCGATCAACGCCACCCTAAGTAAGACCGAGCTGGAAGATCTGTATCTTCCTTATAA
ACCGAAGCGCCGCACTCGCGGACAAATTGCCATTGAAGCCGGGTTAGAACCCCTGGCAGAGCGTTTATGGCAGGATCCAC
AACAAGACCCTGAACACACCGCGCTGGCCTATGTTGATGCCGATAAAGGCGTCGCTGATACTAAAGCCGCGTTGGATGGT
GCTCGCTATATTTTGATGGAGCGGTTTGCCGAAGATGCCACCCTGCTGGCGAAAGTGCGTCAGTATCTGTGGAAAAACGC
CCATCTGGTGTCAAAAGTCGTGGAAGGTAAAGAGCAGGAAGGCGCTAAATTCCGCGATTACTTCGATCACCACGAACCTA
TCGCACAAGTCCCTTCTCACCGCGCATTGGCCATGTTCCGTGGCCGCAATGAGGGGGTACTGCAACTGGCCTTGGATCCT
GATCCGCAATTTGACGAACCGCCGCGTGAAAGTCAGGGTGAACAGATCATTATCAACCATCTTGATCTGCGCTTGAATAA
TGCGCCGGCAGACGGCTGGCGTAAGGCGGTGGTCAACTGGACCTGGCGTATCAAGGTGCTGTTGCATCTGGAAACCGAGC
TGATGAGCACCTTGCGTGAACGGGCTGAAGATGAGGCTATTAATGTCTTTGCCCGTAATATGCAAGATTTACTGATGGCC
GCGCCAGCAGGTATGCGCGCGACCATGGGCCTCGATCCCGGCCTGCGTACTGGCGTGAAAGTCGCGGTGGTGGATGCAAC
AGGCAAGCTGGTCGCTTTCGATACCATCTACCCACACACCGGCCAGGCAGCAAAAGCCGCCGCCGTTGTCGCCGCCCTGT
GCATCAAACACCAGGTTGAACTGGTGGCTATCGGTAACGGTACTGCCTCACGGGAAACCGAGCGCTTCTTTGTGGAGCTA
CAGCAACAGTACCCGGCCGTCACCGCCCAAAAAGTCATTGTCAGTGAGGCCGGTGCCTCGGTCTATTCAGCCTCTGAATT
GGCCTCGCAAGAGTTTCCTGATCTGGATGTCTCCATCCGTGGCGCGGTTTCCATTGCCCGCCGTCTGCAAGATCCGTTGG
CTGAACTGGTAAAAATCGATCCGAAATCTATCGGTGTTGGTCAGTATCAGCACGATGTCAGCCAAAGCCAATTGGCGAAA
AAGCTGGATGCGGTGGTGGAAGACTGCGTAAACGCCGTTGGCGTGGATTTAAACACGGCTTCGGTGCCGTTACTGACACG
TGTTGCCGGTTTGACGCGCATGATGGCACAGAACATCGTGAACTGGCGTGATGAGAATGGCCGCTTCCGCAACCGTGAGC
AATTACTGAAAGTCAGCCGCCTCGGGCCGAAAGCCTTCGAACAGTGTGCAGGCTTCTTGCGTATTAACCACGGCGATAAC
CCCTTAGACGCCTCGACAGTTCACCCAGAAGCCTATCCGGTAGTTGAGCGTATTTTAGCGGCCACCGAGCAGGCGTTGCA
GGACTTAATGGGCAATGCCAATGCGCTGCGCAACCTTAATGCTCGCGATTTTACTACTGAGCGTTTTGGCGTACCAACGG
TAACCGATATTCTGCGAGAGCTGGAAAAGCCAGGCCGTGACCCGCGCTCTGAATTTAAAACAGCCACCTTCGCGGAAGGG
GTGGAAACACTGAATGACCTGACACCGGGCATGATCCTTGAAGGCGCGGTCACTAACGTGACAAATTTTGGTGCTTTTGT
GGATATCGGCGTTCATCAGGATGGTTTGGTGCATATCTCTTCACTGGCCGATAAGTTTGTCGATGATCCACATAAAGTGG
TGAAAGCCGGCGATATCGTCAAAGTCAAAGTGATGGAAGTGGATCTGCAACGTAAGCGCATCGCCCTGACCATGCGCCTT
GATGAGCAGCCAGGTGAAACTCACTCCCGCCGATCCAACAATGGCACGGGTAGCGAGCGCACCAATAATGACAACCGCGG
GGTAAATCGCCCACATAACGACGCGAAAGGTCATAATGCGCCTAACCGTGCTCCGGCCAAAGGGCGATCAGATAGCAGCT
CGGCGGGTAACAGCGCCATGAGCGATGCGCTGGCGGCGGCCTTTAAAAAGCGTTAG

Upstream 100 bases:

>100_bases
CACCGTAAAGTCTACTACAGGTAAGTGATTCGGGTGAGTGAGCACCGCTACCCCCTACGGCCTCAAGTACAAAGGGTAAA
TCAAAATTGATATCAGACTT

Downstream 100 bases:

>100_bases
TCCCTGACAAGGACGGCCATTAAACTGCCCTCCTCATTATTAGATTGATATCCAATAATGAGGAGGGCAGTTTAATAATT
TAACAAAATAATTAATCCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 791; Mature: 791

Protein sequence:

>791_residues
MNEPLSRIIASELQARPEQVISAIRLLDEGNTVPFISRYRKEVTGGLDDIQLRQLESRLGYLRELEDRRQTILKSIEDQG
KLTDQLAGAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLAERLWQDPQQDPEHTALAYVDADKGVADTKAALDG
ARYILMERFAEDATLLAKVRQYLWKNAHLVSKVVEGKEQEGAKFRDYFDHHEPIAQVPSHRALAMFRGRNEGVLQLALDP
DPQFDEPPRESQGEQIIINHLDLRLNNAPADGWRKAVVNWTWRIKVLLHLETELMSTLRERAEDEAINVFARNMQDLLMA
APAGMRATMGLDPGLRTGVKVAVVDATGKLVAFDTIYPHTGQAAKAAAVVAALCIKHQVELVAIGNGTASRETERFFVEL
QQQYPAVTAQKVIVSEAGASVYSASELASQEFPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQSQLAK
KLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVNWRDENGRFRNREQLLKVSRLGPKAFEQCAGFLRINHGDN
PLDASTVHPEAYPVVERILAATEQALQDLMGNANALRNLNARDFTTERFGVPTVTDILRELEKPGRDPRSEFKTATFAEG
VETLNDLTPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLADKFVDDPHKVVKAGDIVKVKVMEVDLQRKRIALTMRL
DEQPGETHSRRSNNGTGSERTNNDNRGVNRPHNDAKGHNAPNRAPAKGRSDSSSAGNSAMSDALAAAFKKR

Sequences:

>Translated_791_residues
MNEPLSRIIASELQARPEQVISAIRLLDEGNTVPFISRYRKEVTGGLDDIQLRQLESRLGYLRELEDRRQTILKSIEDQG
KLTDQLAGAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLAERLWQDPQQDPEHTALAYVDADKGVADTKAALDG
ARYILMERFAEDATLLAKVRQYLWKNAHLVSKVVEGKEQEGAKFRDYFDHHEPIAQVPSHRALAMFRGRNEGVLQLALDP
DPQFDEPPRESQGEQIIINHLDLRLNNAPADGWRKAVVNWTWRIKVLLHLETELMSTLRERAEDEAINVFARNMQDLLMA
APAGMRATMGLDPGLRTGVKVAVVDATGKLVAFDTIYPHTGQAAKAAAVVAALCIKHQVELVAIGNGTASRETERFFVEL
QQQYPAVTAQKVIVSEAGASVYSASELASQEFPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQSQLAK
KLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVNWRDENGRFRNREQLLKVSRLGPKAFEQCAGFLRINHGDN
PLDASTVHPEAYPVVERILAATEQALQDLMGNANALRNLNARDFTTERFGVPTVTDILRELEKPGRDPRSEFKTATFAEG
VETLNDLTPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLADKFVDDPHKVVKAGDIVKVKVMEVDLQRKRIALTMRL
DEQPGETHSRRSNNGTGSERTNNDNRGVNRPHNDAKGHNAPNRAPAKGRSDSSSAGNSAMSDALAAAFKKR
>Mature_791_residues
MNEPLSRIIASELQARPEQVISAIRLLDEGNTVPFISRYRKEVTGGLDDIQLRQLESRLGYLRELEDRRQTILKSIEDQG
KLTDQLAGAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLAERLWQDPQQDPEHTALAYVDADKGVADTKAALDG
ARYILMERFAEDATLLAKVRQYLWKNAHLVSKVVEGKEQEGAKFRDYFDHHEPIAQVPSHRALAMFRGRNEGVLQLALDP
DPQFDEPPRESQGEQIIINHLDLRLNNAPADGWRKAVVNWTWRIKVLLHLETELMSTLRERAEDEAINVFARNMQDLLMA
APAGMRATMGLDPGLRTGVKVAVVDATGKLVAFDTIYPHTGQAAKAAAVVAALCIKHQVELVAIGNGTASRETERFFVEL
QQQYPAVTAQKVIVSEAGASVYSASELASQEFPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQSQLAK
KLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVNWRDENGRFRNREQLLKVSRLGPKAFEQCAGFLRINHGDN
PLDASTVHPEAYPVVERILAATEQALQDLMGNANALRNLNARDFTTERFGVPTVTDILRELEKPGRDPRSEFKTATFAEG
VETLNDLTPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLADKFVDDPHKVVKAGDIVKVKVMEVDLQRKRIALTMRL
DEQPGETHSRRSNNGTGSERTNNDNRGVNRPHNDAKGHNAPNRAPAKGRSDSSSAGNSAMSDALAAAFKKR

Specific function: Unknown

COG id: COG2183

COG function: function code K; Transcriptional accessory protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Homo sapiens, GI221136781, Length=800, Percent_Identity=34.125, Blast_Score=403, Evalue=1e-112,
Organism=Homo sapiens, GI27597090, Length=771, Percent_Identity=23.3463035019455, Blast_Score=105, Evalue=1e-22,
Organism=Escherichia coli, GI87082262, Length=760, Percent_Identity=84.2105263157895, Blast_Score=1301, Evalue=0.0,
Organism=Escherichia coli, GI1787140, Length=109, Percent_Identity=38.5321100917431, Blast_Score=73, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI17511129, Length=734, Percent_Identity=27.3841961852861, Blast_Score=217, Evalue=2e-56,
Organism=Caenorhabditis elegans, GI17552892, Length=659, Percent_Identity=22.4582701062215, Blast_Score=87, Evalue=3e-17,
Organism=Saccharomyces cerevisiae, GI6321552, Length=229, Percent_Identity=25.764192139738, Blast_Score=70, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6320850, Length=118, Percent_Identity=35.5932203389831, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI62484314, Length=781, Percent_Identity=30.089628681178, Blast_Score=347, Evalue=2e-95,
Organism=Drosophila melanogaster, GI24640080, Length=431, Percent_Identity=23.8979118329466, Blast_Score=103, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR022967
- InterPro:   IPR018974
- InterPro:   IPR023097 [H]

Pfam domain/function: PF00575 S1; PF09371 Tex_N [H]

EC number: NA

Molecular weight: Translated: 87348; Mature: 87348

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEPLSRIIASELQARPEQVISAIRLLDEGNTVPFISRYRKEVTGGLDDIQLRQLESRLG
CCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH
YLRELEDRRQTILKSIEDQGKLTDQLAGAINATLSKTELEDLYLPYKPKRRTRGQIAIEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHH
GLEPLAERLWQDPQQDPEHTALAYVDADKGVADTKAALDGARYILMERFAEDATLLAKVR
CHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QYLWKNAHLVSKVVEGKEQEGAKFRDYFDHHEPIAQVPSHRALAMFRGRNEGVLQLALDP
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHCCCCCEEHHHCCCCCCEEEEEECC
DPQFDEPPRESQGEQIIINHLDLRLNNAPADGWRKAVVNWTWRIKVLLHLETELMSTLRE
CCCCCCCCCCCCCCEEEEEEEEEEECCCCCHHHHHHHHCEEEEEEEEEEEHHHHHHHHHH
RAEDEAINVFARNMQDLLMAAPAGMRATMGLDPGLRTGVKVAVVDATGKLVAFDTIYPHT
HHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEEEECCCCEEEEEECCCCC
GQAAKAAAVVAALCIKHQVELVAIGNGTASRETERFFVELQQQYPAVTAQKVIVSEAGAS
CCHHHHHHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCH
VYSASELASQEFPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQSQLAK
HHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
KLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVNWRDENGRFRNREQLLKVSR
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
LGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATEQALQDLMGNANALRNLN
CCHHHHHHHHCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCC
ARDFTTERFGVPTVTDILRELEKPGRDPRSEFKTATFAEGVETLNDLTPGMILEGAVTNV
CCCCCHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHH
TNFGAFVDIGVHQDGLVHISSLADKFVDDPHKVVKAGDIVKVKVMEVDLQRKRIALTMRL
HHCCCEEEECCCCCCHHHHHHHHHHHCCCHHHHHHCCCEEEEEEEEECCCCCEEEEEEEE
DEQPGETHSRRSNNGTGSERTNNDNRGVNRPHNDAKGHNAPNRAPAKGRSDSSSAGNSAM
CCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
SDALAAAFKKR
HHHHHHHHHCC
>Mature Secondary Structure
MNEPLSRIIASELQARPEQVISAIRLLDEGNTVPFISRYRKEVTGGLDDIQLRQLESRLG
CCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH
YLRELEDRRQTILKSIEDQGKLTDQLAGAINATLSKTELEDLYLPYKPKRRTRGQIAIEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHH
GLEPLAERLWQDPQQDPEHTALAYVDADKGVADTKAALDGARYILMERFAEDATLLAKVR
CHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QYLWKNAHLVSKVVEGKEQEGAKFRDYFDHHEPIAQVPSHRALAMFRGRNEGVLQLALDP
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHCCCCCEEHHHCCCCCCEEEEEECC
DPQFDEPPRESQGEQIIINHLDLRLNNAPADGWRKAVVNWTWRIKVLLHLETELMSTLRE
CCCCCCCCCCCCCCEEEEEEEEEEECCCCCHHHHHHHHCEEEEEEEEEEEHHHHHHHHHH
RAEDEAINVFARNMQDLLMAAPAGMRATMGLDPGLRTGVKVAVVDATGKLVAFDTIYPHT
HHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEEEECCCCEEEEEECCCCC
GQAAKAAAVVAALCIKHQVELVAIGNGTASRETERFFVELQQQYPAVTAQKVIVSEAGAS
CCHHHHHHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCH
VYSASELASQEFPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQSQLAK
HHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
KLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVNWRDENGRFRNREQLLKVSR
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
LGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATEQALQDLMGNANALRNLN
CCHHHHHHHHCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCC
ARDFTTERFGVPTVTDILRELEKPGRDPRSEFKTATFAEGVETLNDLTPGMILEGAVTNV
CCCCCHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHH
TNFGAFVDIGVHQDGLVHISSLADKFVDDPHKVVKAGDIVKVKVMEVDLQRKRIALTMRL
HHCCCEEEECCCCCCHHHHHHHHHHHCCCHHHHHHCCCEEEEEEEEECCCCCEEEEEEEE
DEQPGETHSRRSNNGTGSERTNNDNRGVNRPHNDAKGHNAPNRAPAKGRSDSSSAGNSAM
CCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
SDALAAAFKKR
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503; 10493123 [H]