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The map label for this gene is yihI

Identifier: 22127679

GI number: 22127679

Start: 4230013

End: 4230579

Strand: Reverse

Name: yihI

Synonym: y3808

Alternate gene names: 22127679

Gene position: 4230579-4230013 (Counterclockwise)

Preceding gene: 22127681

Following gene: 161484735

Centisome position: 91.95

GC content: 48.5

Gene sequence:

>567_bases
ATGAAGCAGCCAAATAAAGCACCACGCGCGAATATTGCGGCCCCGAAGGGTACAGCAACACCAAAACGTAGAAGAAAGAC
CCGTGATGAGCTGGATGCTGAAGCACGTGACCGTAAACGTCAGAAGAAACACAGTGGCAATCGCTCAGGTGCGAGAACCA
ATGTTGAGGGCAGCAATAAGAAAGGGCATAGCCAGACTCAAGAGAAAGATCCGCGTGTCGGTAGTAAAGTGCCTGTACCG
CTGGTCATTGAGAGCCAGGTCAAAGCCAAGTCAATGCCTAAGCCTGTAGAGAAAAATGTGGTTAAGCCACGCCTGACGCC
GGAAGAAGAGCTAGCCAAGCTGGAGAATGACGAACGTCTGGATGCGCTGCTTGATCGTCTGGATAATGACGAAGTATTGA
ACAAAGAAGACCAGGCCTATGTCGATCTGACATTAGACCGTATTGATGCCCTGATGGAGCAATTAGGCATCGAACTGGGT
GATGACGAAGATGATGTTGAGCGAGAAGAGAAGCAGGAAGATATCTTGCAGCTACTGAAACGTGGTAATCCAAAAGATAC
ATTTTAA

Upstream 100 bases:

>100_bases
TGCAGGAAGGCGGCAAACGAGAGCGGCCAACACATCTGCAACTTGGACGGTGGCGGGTATATACTAAATCCGATCCCATA
CTCATTTAAGAGCACAGGTT

Downstream 100 bases:

>100_bases
GTCATGAACTGGGTGGTCCCACTAATAGCCCTACTACTCACGTGTTATCTATTGTGGTTATTAGGTAAACTATGGCGGCT
GTCGCAACGCAAATCACGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MKQPNKAPRANIAAPKGTATPKRRRKTRDELDAEARDRKRQKKHSGNRSGARTNVEGSNKKGHSQTQEKDPRVGSKVPVP
LVIESQVKAKSMPKPVEKNVVKPRLTPEEELAKLENDERLDALLDRLDNDEVLNKEDQAYVDLTLDRIDALMEQLGIELG
DDEDDVEREEKQEDILQLLKRGNPKDTF

Sequences:

>Translated_188_residues
MKQPNKAPRANIAAPKGTATPKRRRKTRDELDAEARDRKRQKKHSGNRSGARTNVEGSNKKGHSQTQEKDPRVGSKVPVP
LVIESQVKAKSMPKPVEKNVVKPRLTPEEELAKLENDERLDALLDRLDNDEVLNKEDQAYVDLTLDRIDALMEQLGIELG
DDEDDVEREEKQEDILQLLKRGNPKDTF
>Mature_188_residues
MKQPNKAPRANIAAPKGTATPKRRRKTRDELDAEARDRKRQKKHSGNRSGARTNVEGSNKKGHSQTQEKDPRVGSKVPVP
LVIESQVKAKSMPKPVEKNVVKPRLTPEEELAKLENDERLDALLDRLDNDEVLNKEDQAYVDLTLDRIDALMEQLGIELG
DDEDDVEREEKQEDILQLLKRGNPKDTF

Specific function: A GTPase-activating protein (GAP) that modifies Der/EngA GTPase function. May play a role in ribosome biogenesis

COG id: COG3078

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YihI family

Homologues:

Organism=Escherichia coli, GI1790297, Length=150, Percent_Identity=48.6666666666667, Blast_Score=110, Evalue=6e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YIHI_YERP3 (A7FCP6)

Other databases:

- EMBL:   CP000720
- RefSeq:   YP_001399024.1
- ProteinModelPortal:   A7FCP6
- STRING:   A7FCP6
- GeneID:   5384775
- GenomeReviews:   CP000720_GR
- KEGG:   ypi:YpsIP31758_0023
- eggNOG:   COG3078
- HOGENOM:   HBG303443
- OMA:   AQKKDPR
- ProtClustDB:   PRK05244
- BioCyc:   YPSE349747:YPSIP31758_0023-MONOMER
- HAMAP:   MF_01058
- InterPro:   IPR007336

Pfam domain/function: PF04220 DUF414

EC number: NA

Molecular weight: Translated: 21348; Mature: 21348

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQPNKAPRANIAAPKGTATPKRRRKTRDELDAEARDRKRQKKHSGNRSGARTNVEGSNK
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
KGHSQTQEKDPRVGSKVPVPLVIESQVKAKSMPKPVEKNVVKPRLTPEEELAKLENDERL
CCCCCHHHCCCCCCCCCCCCEEECCHHHHHCCCCCHHHHCCCCCCCCHHHHHHCCCCHHH
DALLDRLDNDEVLNKEDQAYVDLTLDRIDALMEQLGIELGDDEDDVEREEKQEDILQLLK
HHHHHHCCCCHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
RGNPKDTF
CCCCCCCC
>Mature Secondary Structure
MKQPNKAPRANIAAPKGTATPKRRRKTRDELDAEARDRKRQKKHSGNRSGARTNVEGSNK
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
KGHSQTQEKDPRVGSKVPVPLVIESQVKAKSMPKPVEKNVVKPRLTPEEELAKLENDERL
CCCCCHHHCCCCCCCCCCCCEEECCHHHHHCCCCCHHHHCCCCCCCCHHHHHHCCCCHHH
DALLDRLDNDEVLNKEDQAYVDLTLDRIDALMEQLGIELGDDEDDVEREEKQEDILQLLK
HHHHHHCCCCHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
RGNPKDTF
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA