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The map label for this gene is rsmC [H]

Identifier: 22127624

GI number: 22127624

Start: 4171842

End: 4172885

Strand: Direct

Name: rsmC [H]

Synonym: y3753

Alternate gene names: 22127624

Gene position: 4171842-4172885 (Clockwise)

Preceding gene: 22127622

Following gene: 22127627

Centisome position: 90.68

GC content: 52.11

Gene sequence:

>1044_bases
ATGTCAGCATTAACCCCAGCCAGTGAAGTGATACTGCGCCATAGTGATGAATTTATAGCCCGCCACGTCCTGTTTGCCGG
TGATTTACAAGATGCGCTGCCAGCGCAATTTGATGCAGCCGGGGTGCGGGTTCACACCAATCAATATCACCACTGGCAAT
TACTGAGCAACACGCTGGAAGAGAATGTGCAATTCGGTCTTTTAGCCACGGCAGAAACTCTCGCAGCTTGCGACACCCTG
ATTTACTACTGGCCCAAAAGCAAACAAGAAGCCCAATTCCAGTTGGCTAACCTGCTTTCTATACTGCCTGTTGGCACCGA
TATTTTTGTTGTGGGTGAAAACCGCAGTGGTGTACGCAGCGCAGAAGAAATGTTGGCAGACTTCGCGCAGTTAGCCAAGA
TAGACAGCGCTCGCCGCTGTGGTTTGTACCATGGCCGTTTAGACAAACAACCCGAATTTGATGCTGATGCCTGGTGGGAA
AGCTATCAGGTCGGTGGTGTGACGGTCAAAACATTGCCGGGTGTCTTCAGCCGCGATTCTCTGGATTCGGGTAGTCATCT
GTTGCTGTCCACCTTTAACGAGCCCTTTAAAGGCAGCGTATTGGATGTCGGTTGTGGTGCTGGAGTATTAGCCTCGGTTC
TGGCGCAGCAATCGCCAAAAATCAAATGGACGTTGAGTGATGTCAGTGCCGCAGCCATTGAAGCCAGCCGAGCCACATTG
GCGGTGAATAATATTGAGGCGCAAGTGATTGCCAGTAACGTCTATTCCGACATCAAAGGCCGCTTTGAGATGATCATTTC
GAACCCGCCTTTCCATGATGGGATCCAAACCAGCCTGACCGCCGCTGAGATGCTGATCCGTGGAGCGACCGCCCACCTAC
ATGTGGGGGGGAAATTACGCATCGTAGCGAACTCCTTCCTGCCGTATCCTGCCTTGCTGGATGCCGCATTTGGTAGCCAC
GAAGTGCTGGCACAGAATGGCCGCTTTAAAGTGTATCAGGCAACTGTCGGGCGTCCGCCACGGGATCCGAAGAAAAAACG
TTAA

Upstream 100 bases:

>100_bases
CAGAGCAAGCCGTAATTTGGCGCTATGCTAGCAAACCCATCGAACATGCGCCAACAAACCTCTATAATCCCCGATTATAT
TATTAAGGAGCCAAAGACTG

Downstream 100 bases:

>100_bases
TATTAAAGCACTAAGATTCAAACAGTAAGATAGGCCACCTCTTCCTCGCCGTAGCATTCATTCGCTGCGGCATGGAACGG
GAACAGCGCCTCCAGTCCCC

Product: 16S ribosomal RNA m2G1207 methyltransferase

Products: NA

Alternate protein names: 16S rRNA m2G1207 methyltransferase; rRNA (guanine-N(2)-)-methyltransferase rsmC [H]

Number of amino acids: Translated: 347; Mature: 346

Protein sequence:

>347_residues
MSALTPASEVILRHSDEFIARHVLFAGDLQDALPAQFDAAGVRVHTNQYHHWQLLSNTLEENVQFGLLATAETLAACDTL
IYYWPKSKQEAQFQLANLLSILPVGTDIFVVGENRSGVRSAEEMLADFAQLAKIDSARRCGLYHGRLDKQPEFDADAWWE
SYQVGGVTVKTLPGVFSRDSLDSGSHLLLSTFNEPFKGSVLDVGCGAGVLASVLAQQSPKIKWTLSDVSAAAIEASRATL
AVNNIEAQVIASNVYSDIKGRFEMIISNPPFHDGIQTSLTAAEMLIRGATAHLHVGGKLRIVANSFLPYPALLDAAFGSH
EVLAQNGRFKVYQATVGRPPRDPKKKR

Sequences:

>Translated_347_residues
MSALTPASEVILRHSDEFIARHVLFAGDLQDALPAQFDAAGVRVHTNQYHHWQLLSNTLEENVQFGLLATAETLAACDTL
IYYWPKSKQEAQFQLANLLSILPVGTDIFVVGENRSGVRSAEEMLADFAQLAKIDSARRCGLYHGRLDKQPEFDADAWWE
SYQVGGVTVKTLPGVFSRDSLDSGSHLLLSTFNEPFKGSVLDVGCGAGVLASVLAQQSPKIKWTLSDVSAAAIEASRATL
AVNNIEAQVIASNVYSDIKGRFEMIISNPPFHDGIQTSLTAAEMLIRGATAHLHVGGKLRIVANSFLPYPALLDAAFGSH
EVLAQNGRFKVYQATVGRPPRDPKKKR
>Mature_346_residues
SALTPASEVILRHSDEFIARHVLFAGDLQDALPAQFDAAGVRVHTNQYHHWQLLSNTLEENVQFGLLATAETLAACDTLI
YYWPKSKQEAQFQLANLLSILPVGTDIFVVGENRSGVRSAEEMLADFAQLAKIDSARRCGLYHGRLDKQPEFDADAWWES
YQVGGVTVKTLPGVFSRDSLDSGSHLLLSTFNEPFKGSVLDVGCGAGVLASVLAQQSPKIKWTLSDVSAAAIEASRATLA
VNNIEAQVIASNVYSDIKGRFEMIISNPPFHDGIQTSLTAAEMLIRGATAHLHVGGKLRIVANSFLPYPALLDAAFGSHE
VLAQNGRFKVYQATVGRPPRDPKKKR

Specific function: Specifically methylates the guanosine in position 1207 of 16S rRNA in the 30S particle [H]

COG id: COG2813

COG function: function code J; 16S RNA G1207 methylase RsmC

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmC family [H]

Homologues:

Organism=Escherichia coli, GI1790830, Length=338, Percent_Identity=69.8224852071006, Blast_Score=498, Evalue=1e-142,
Organism=Escherichia coli, GI87082206, Length=186, Percent_Identity=31.7204301075269, Blast_Score=92, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002052
- InterPro:   IPR013675
- InterPro:   IPR007848 [H]

Pfam domain/function: PF05175 MTS; PF08468 MTS_N [H]

EC number: =2.1.1.172 [H]

Molecular weight: Translated: 37799; Mature: 37668

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSALTPASEVILRHSDEFIARHVLFAGDLQDALPAQFDAAGVRVHTNQYHHWQLLSNTLE
CCCCCCHHHHHHHCCHHHHHHHHHHCCCHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHH
ENVQFGLLATAETLAACDTLIYYWPKSKQEAQFQLANLLSILPVGTDIFVVGENRSGVRS
HCCCEEEEHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHH
AEEMLADFAQLAKIDSARRCGLYHGRLDKQPEFDADAWWESYQVGGVTVKTLPGVFSRDS
HHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCHHHHHHCEEECCEEEEECCCCCCCCC
LDSGSHLLLSTFNEPFKGSVLDVGCGAGVLASVLAQQSPKIKWTLSDVSAAAIEASRATL
CCCCCEEEEECCCCCCCCCEEEECCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHCCEEE
AVNNIEAQVIASNVYSDIKGRFEMIISNPPFHDGIQTSLTAAEMLIRGATAHLHVGGKLR
EEECCCHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCEEE
IVANSFLPYPALLDAAFGSHEVLAQNGRFKVYQATVGRPPRDPKKKR
EEECCCCCCHHHHHHCCCCCHHEECCCCEEEEEEECCCCCCCCCCCC
>Mature Secondary Structure 
SALTPASEVILRHSDEFIARHVLFAGDLQDALPAQFDAAGVRVHTNQYHHWQLLSNTLE
CCCCCHHHHHHHCCHHHHHHHHHHCCCHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHH
ENVQFGLLATAETLAACDTLIYYWPKSKQEAQFQLANLLSILPVGTDIFVVGENRSGVRS
HCCCEEEEHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHH
AEEMLADFAQLAKIDSARRCGLYHGRLDKQPEFDADAWWESYQVGGVTVKTLPGVFSRDS
HHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCHHHHHHCEEECCEEEEECCCCCCCCC
LDSGSHLLLSTFNEPFKGSVLDVGCGAGVLASVLAQQSPKIKWTLSDVSAAAIEASRATL
CCCCCEEEEECCCCCCCCCEEEECCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHCCEEE
AVNNIEAQVIASNVYSDIKGRFEMIISNPPFHDGIQTSLTAAEMLIRGATAHLHVGGKLR
EEECCCHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCEEE
IVANSFLPYPALLDAAFGSHEVLAQNGRFKVYQATVGRPPRDPKKKR
EEECCCCCCHHHHHHCCCCCHHEECCCCEEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA