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The map label for this gene is smp

Identifier: 22127611

GI number: 22127611

Start: 4158035

End: 4158736

Strand: Direct

Name: smp

Synonym: y3739

Alternate gene names: 22127611

Gene position: 4158035-4158736 (Clockwise)

Preceding gene: 22127607

Following gene: 22127622

Centisome position: 90.38

GC content: 50.28

Gene sequence:

>702_bases
ATGGCACGGGCTAAATTAAAATTTCGACTACACCGAACAGCAATTGTACTGATCTGTTTGGCATTATTGGTCTTGCTGAT
GCAAGGCGCATCCTATTTCAGCCTGAGCCACCAGTTAGCACGTTCAGAGCAGGTCGAAGAGCTGGCACAAACACTCGCCA
AACAAGTTGCTTTTAGCTTGTCGCCCATTATGGATAGCGGTGACGACAATATTGATAGCCAGAAAGTCGATGCCATTCTT
CAACAACTGACACAATCCAGCCGTATTTTAGATGCCAGCGTCTATCAGATTGACGGTACGTTGGTTGCCAGCGCCGGAGA
AAATGTGAAGGTACGCGACCGGTTGGCACTGGATGGTAAACGCCCTGGCAGTTATTTCAACCACCAAATAGTTGAAATGA
TCGCGGGTAACAGTGGGCCAAGTGGTTTTCTGCGCATGACACTGGATACCCACGTGTTGGCGACGGAATCCAAGCAAGTG
GATAACACCACTAACTTACTGCGTCTGATGATTCTGGTGGCTCTGGCCGTGGGGATTATTCTGGCCCGCACCCTGTTACA
AGGCCGCCGTAGCCGTTGGCAGCAATCCCCTTATCTGCTGACGGCCAATATACCGGTTAAAGAAGAAGATGAAAGCGAAG
ATGACACGCCAGAAGCCCTCGTCGGTCAGGCGGAAACCGACCATAAGCCTGCCGATAAATAG

Upstream 100 bases:

>100_bases
CCAAAAGAATTGGCGCTGCAGTCAATGAAGGGTGAATCAGAACCGCTGCGTCACGCAGCAACATCAAGTATGCAGGGTAT
CATTCTCGTGAGGAACCGGT

Downstream 100 bases:

>100_bases
CCTCTCGGGGACACGTTAGTGATTCAGAGAGGAATAAATCAATTCAGCGGCAGAGATCTCTACCGCTGAAGAAAGAAAAA
ACCGCTGGAAAGGGAGAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 232

Protein sequence:

>233_residues
MARAKLKFRLHRTAIVLICLALLVLLMQGASYFSLSHQLARSEQVEELAQTLAKQVAFSLSPIMDSGDDNIDSQKVDAIL
QQLTQSSRILDASVYQIDGTLVASAGENVKVRDRLALDGKRPGSYFNHQIVEMIAGNSGPSGFLRMTLDTHVLATESKQV
DNTTNLLRLMILVALAVGIILARTLLQGRRSRWQQSPYLLTANIPVKEEDESEDDTPEALVGQAETDHKPADK

Sequences:

>Translated_233_residues
MARAKLKFRLHRTAIVLICLALLVLLMQGASYFSLSHQLARSEQVEELAQTLAKQVAFSLSPIMDSGDDNIDSQKVDAIL
QQLTQSSRILDASVYQIDGTLVASAGENVKVRDRLALDGKRPGSYFNHQIVEMIAGNSGPSGFLRMTLDTHVLATESKQV
DNTTNLLRLMILVALAVGIILARTLLQGRRSRWQQSPYLLTANIPVKEEDESEDDTPEALVGQAETDHKPADK
>Mature_232_residues
ARAKLKFRLHRTAIVLICLALLVLLMQGASYFSLSHQLARSEQVEELAQTLAKQVAFSLSPIMDSGDDNIDSQKVDAILQ
QLTQSSRILDASVYQIDGTLVASAGENVKVRDRLALDGKRPGSYFNHQIVEMIAGNSGPSGFLRMTLDTHVLATESKQVD
NTTNLLRLMILVALAVGIILARTLLQGRRSRWQQSPYLLTANIPVKEEDESEDDTPEALVGQAETDHKPADK

Specific function: Unknown

COG id: COG3726

COG function: function code R; Uncharacterized membrane protein affecting hemolysin expression

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smp family

Homologues:

Organism=Escherichia coli, GI1790847, Length=206, Percent_Identity=65.5339805825243, Blast_Score=267, Evalue=5e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SMP_YERPE (Q8ZIQ1)

Other databases:

- EMBL:   AL590842
- EMBL:   AE009952
- EMBL:   AE017042
- PIR:   AG0054
- RefSeq:   NP_671034.1
- RefSeq:   NP_995012.1
- RefSeq:   YP_002345515.1
- ProteinModelPortal:   Q8ZIQ1
- GeneID:   1148686
- GeneID:   1173286
- GeneID:   2765454
- GenomeReviews:   AE009952_GR
- GenomeReviews:   AE017042_GR
- GenomeReviews:   AL590842_GR
- KEGG:   ype:YPO0441
- KEGG:   ypk:y3739
- KEGG:   ypm:YP_3741
- HOGENOM:   HBG416714
- OMA:   RITLDTH
- ProtClustDB:   PRK11246
- BioCyc:   YPES187410:Y3739-MONOMER
- BioCyc:   YPES214092:YPO0441-MONOMER
- InterPro:   IPR019305

Pfam domain/function: PF10144 SMP_2

EC number: NA

Molecular weight: Translated: 25637; Mature: 25506

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARAKLKFRLHRTAIVLICLALLVLLMQGASYFSLSHQLARSEQVEELAQTLAKQVAFSL
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SPIMDSGDDNIDSQKVDAILQQLTQSSRILDASVYQIDGTLVASAGENVKVRDRLALDGK
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCEEEECCCCCCEEHHHHCCCCC
RPGSYFNHQIVEMIAGNSGPSGFLRMTLDTHVLATESKQVDNTTNLLRLMILVALAVGII
CCCCHHHHHHHHHHHCCCCCCCEEEEEECHHEEECCCHHCCCHHHHHHHHHHHHHHHHHH
LARTLLQGRRSRWQQSPYLLTANIPVKEEDESEDDTPEALVGQAETDHKPADK
HHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
ARAKLKFRLHRTAIVLICLALLVLLMQGASYFSLSHQLARSEQVEELAQTLAKQVAFSL
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SPIMDSGDDNIDSQKVDAILQQLTQSSRILDASVYQIDGTLVASAGENVKVRDRLALDGK
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCEEEECCCCCCEEHHHHCCCCC
RPGSYFNHQIVEMIAGNSGPSGFLRMTLDTHVLATESKQVDNTTNLLRLMILVALAVGII
CCCCHHHHHHHHHHHCCCCCCCEEEEEECHHEEECCCHHCCCHHHHHHHHHHHHHHHHHH
LARTLLQGRRSRWQQSPYLLTANIPVKEEDESEDDTPEALVGQAETDHKPADK
HHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430