| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22127531
Identifier: 22127531
GI number: 22127531
Start: 4061912
End: 4062271
Strand: Reverse
Name: 22127531
Synonym: y3657
Alternate gene names: NA
Gene position: 4062271-4061912 (Counterclockwise)
Preceding gene: 22127532
Following gene: 22127528
Centisome position: 88.3
GC content: 42.5
Gene sequence:
>360_bases ATGCAAATGCTAGATCCTAAAAACATCCAGAATGTATTGAAGTCATCTACTGACCTTGGTCAGCAATCTCAATCTGATTT GCAGAAACCTTTTGTAAAAGGAATGCAAAATATGGAGATGTCAGGGGCCGATGCCGCTCGCAGTATCATGCAATCGGTTA ATCAATCCTGCGAAACCATGATGAGCGATATGAATAAGATATTGGGAGGATTGCAGGACAATGTTGATGCTCACCAGAAA ATGCAAAGTGAGGAGCGTCCGAAGGACTTCGAGAGAGCCATGAGTGATCTTCGCAGCACACTCTCCAATGGTTTCCCAGA GGAAATGAAAAGTATGTTTGATAAATTGCCCAAAATGTAG
Upstream 100 bases:
>100_bases CAAAATTGAGTTGAGTTCCACCATGAAAGATTATCCGCTGTGGTCAAAAGCATTGGCACAGTTCTCATGTCCTAAGAATC TCTAACCGCGAAATAAGGAA
Downstream 100 bases:
>100_bases CGGGCAGTCGTCAGACAAAAAAATATCCGGGGGAATGCCCCGGATATCAGACTGCTGACAAACCCCGATGACTCACTCTT GAACGGTGAGGATAGGCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MQMLDPKNIQNVLKSSTDLGQQSQSDLQKPFVKGMQNMEMSGADAARSIMQSVNQSCETMMSDMNKILGGLQDNVDAHQK MQSEERPKDFERAMSDLRSTLSNGFPEEMKSMFDKLPKM
Sequences:
>Translated_119_residues MQMLDPKNIQNVLKSSTDLGQQSQSDLQKPFVKGMQNMEMSGADAARSIMQSVNQSCETMMSDMNKILGGLQDNVDAHQK MQSEERPKDFERAMSDLRSTLSNGFPEEMKSMFDKLPKM >Mature_119_residues MQMLDPKNIQNVLKSSTDLGQQSQSDLQKPFVKGMQNMEMSGADAARSIMQSVNQSCETMMSDMNKILGGLQDNVDAHQK MQSEERPKDFERAMSDLRSTLSNGFPEEMKSMFDKLPKM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13442; Mature: 13442
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 11.8 %Met (Translated Protein) 12.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 11.8 %Met (Mature Protein) 12.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQMLDPKNIQNVLKSSTDLGQQSQSDLQKPFVKGMQNMEMSGADAARSIMQSVNQSCETM CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH MSDMNKILGGLQDNVDAHQKMQSEERPKDFERAMSDLRSTLSNGFPEEMKSMFDKLPKM HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC >Mature Secondary Structure MQMLDPKNIQNVLKSSTDLGQQSQSDLQKPFVKGMQNMEMSGADAARSIMQSVNQSCETM CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH MSDMNKILGGLQDNVDAHQKMQSEERPKDFERAMSDLRSTLSNGFPEEMKSMFDKLPKM HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA