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The map label for this gene is ygjR [H]

Identifier: 22127467

GI number: 22127467

Start: 3988893

End: 3989921

Strand: Direct

Name: ygjR [H]

Synonym: y3594

Alternate gene names: 22127467

Gene position: 3988893-3989921 (Clockwise)

Preceding gene: 22127466

Following gene: 22127469

Centisome position: 86.7

GC content: 47.04

Gene sequence:

>1029_bases
GTGCTTTTATTTTATAGGAATGGAGTTAACGATATGATTCGCTTCGCTGTTATTGGCACCAATTGGATCACCGCACGCTT
TGTCGATGCTGCCCACGAAAGTGGCAAAATGAAACTGGTAGCCGTTTACTCCCGCAAGCTGGACCAGGCTCAGACTTTTG
GCGATGATTATCACGTCACTGACTGTTTTGATAATTTGGAAGCCTTAGCCGCAAGTGATTTGATTGATGCGGTGTATATC
GCCAGCCCGAATGCCTTGCATTATTCTCAAGCCAAACTCTTCCTTAGCCATAAAAAGCACGTTATTTGCGAAAAGTCGCT
AGCATCGAATCTGGCAGAGGTAGAGTCTCTGATCGCTTGCGCCCACCAGCATCAGGTGGTGCTCTTTGAGGCCTTTAAAA
CGGCTTATCTCCCCAACTTTATACAACTACAGCAAGCGCTACCGCGTGTGGGGAAATTACGTAAAGCCTTTATTAACTTC
TGCCAATATTCCTCTCGTTATCAGCGCTATTTGAACGGCGAAAATCCCAATACCTTTAATCCCGCTTTTTCTAATGGTTC
AATCATGGATATTGGCTATTACTGTCTGGCCAGCGCCCTGGCGTTATGGGGAGAACCCAAATCGGTGTGGGCAAGCGCAA
GTTTACTCCCAAGCGGTGTCGATGCTCACGGTACGGTCAGTCTGAATTACGGTGATTTTGATGTCATTATCATCCACTCA
AAAGTCAGCCAATCGGATATTCCCAGTGAAATTCAGGGAGAAGATGGCTCGTTAGTCATTGAAAGTATTTCTGAATGCTT
ATCCGTGGCCTTCACGCCAAGAGGAAGCCATTCACAAGACCTGACGCAACCACAGCATATTAATACCATGCTGTATGAAG
CAGAGGCCTTTGCCCGTTTGGTGGAGAATAATCGGGTGGATCACGATGGCTTACACCTGTCATTACTGACGTCACGCATT
CAAACAGAAATCCGCCGCCAGACGGGTGTTATATTCCCGGCAGATACTCAATACCCCGCCGCGAGTTAA

Upstream 100 bases:

>100_bases
AACTCAAAATAACCAAACTGTAGCTCTGCGGGCCGTAATAATCTGACGGCTCAACCTGTTTTTCTTCTACCCGTTTTTCT
TTTACTGGTTTTTCTTCTAC

Downstream 100 bases:

>100_bases
TGTTTCGTTTAAAGACTGTTTGCAGATATCGGTGCAAAACAGCAACCAACAAATAAAAGGTTGCAATAAAGCAAGCGGTT
AATAAAGCATCTAATCACTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MLLFYRNGVNDMIRFAVIGTNWITARFVDAAHESGKMKLVAVYSRKLDQAQTFGDDYHVTDCFDNLEALAASDLIDAVYI
ASPNALHYSQAKLFLSHKKHVICEKSLASNLAEVESLIACAHQHQVVLFEAFKTAYLPNFIQLQQALPRVGKLRKAFINF
CQYSSRYQRYLNGENPNTFNPAFSNGSIMDIGYYCLASALALWGEPKSVWASASLLPSGVDAHGTVSLNYGDFDVIIIHS
KVSQSDIPSEIQGEDGSLVIESISECLSVAFTPRGSHSQDLTQPQHINTMLYEAEAFARLVENNRVDHDGLHLSLLTSRI
QTEIRRQTGVIFPADTQYPAAS

Sequences:

>Translated_342_residues
MLLFYRNGVNDMIRFAVIGTNWITARFVDAAHESGKMKLVAVYSRKLDQAQTFGDDYHVTDCFDNLEALAASDLIDAVYI
ASPNALHYSQAKLFLSHKKHVICEKSLASNLAEVESLIACAHQHQVVLFEAFKTAYLPNFIQLQQALPRVGKLRKAFINF
CQYSSRYQRYLNGENPNTFNPAFSNGSIMDIGYYCLASALALWGEPKSVWASASLLPSGVDAHGTVSLNYGDFDVIIIHS
KVSQSDIPSEIQGEDGSLVIESISECLSVAFTPRGSHSQDLTQPQHINTMLYEAEAFARLVENNRVDHDGLHLSLLTSRI
QTEIRRQTGVIFPADTQYPAAS
>Mature_342_residues
MLLFYRNGVNDMIRFAVIGTNWITARFVDAAHESGKMKLVAVYSRKLDQAQTFGDDYHVTDCFDNLEALAASDLIDAVYI
ASPNALHYSQAKLFLSHKKHVICEKSLASNLAEVESLIACAHQHQVVLFEAFKTAYLPNFIQLQQALPRVGKLRKAFINF
CQYSSRYQRYLNGENPNTFNPAFSNGSIMDIGYYCLASALALWGEPKSVWASASLLPSGVDAHGTVSLNYGDFDVIIIHS
KVSQSDIPSEIQGEDGSLVIESISECLSVAFTPRGSHSQDLTQPQHINTMLYEAEAFARLVENNRVDHDGLHLSLLTSRI
QTEIRRQTGVIFPADTQYPAAS

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Homo sapiens, GI7657212, Length=346, Percent_Identity=24.2774566473988, Blast_Score=88, Evalue=1e-17,
Organism=Escherichia coli, GI145693182, Length=325, Percent_Identity=73.5384615384615, Blast_Score=496, Evalue=1e-141,
Organism=Drosophila melanogaster, GI24581117, Length=349, Percent_Identity=26.3610315186246, Blast_Score=106, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24581115, Length=302, Percent_Identity=23.5099337748344, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24584727, Length=310, Percent_Identity=24.5161290322581, Blast_Score=69, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 37987; Mature: 37987

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLFYRNGVNDMIRFAVIGTNWITARFVDAAHESGKMKLVAVYSRKLDQAQTFGDDYHVT
CEEEEECCHHHHEEEEEECCCHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHCCCCCCHH
DCFDNLEALAASDLIDAVYIASPNALHYSQAKLFLSHKKHVICEKSLASNLAEVESLIAC
HHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHCCCHHEEHHHHHHHHHHHHHHHHH
AHQHQVVLFEAFKTAYLPNFIQLQQALPRVGKLRKAFINFCQYSSRYQRYLNGENPNTFN
HHCCCEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PAFSNGSIMDIGYYCLASALALWGEPKSVWASASLLPSGVDAHGTVSLNYGDFDVIIIHS
CCCCCCCEEHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEEEC
KVSQSDIPSEIQGEDGSLVIESISECLSVAFTPRGSHSQDLTQPQHINTMLYEAEAFARL
CCCCCCCCCHHCCCCCCCHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
VENNRVDHDGLHLSLLTSRIQTEIRRQTGVIFPADTQYPAAS
HHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCC
>Mature Secondary Structure
MLLFYRNGVNDMIRFAVIGTNWITARFVDAAHESGKMKLVAVYSRKLDQAQTFGDDYHVT
CEEEEECCHHHHEEEEEECCCHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHCCCCCCHH
DCFDNLEALAASDLIDAVYIASPNALHYSQAKLFLSHKKHVICEKSLASNLAEVESLIAC
HHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHCCCHHEEHHHHHHHHHHHHHHHHH
AHQHQVVLFEAFKTAYLPNFIQLQQALPRVGKLRKAFINFCQYSSRYQRYLNGENPNTFN
HHCCCEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PAFSNGSIMDIGYYCLASALALWGEPKSVWASASLLPSGVDAHGTVSLNYGDFDVIIIHS
CCCCCCCEEHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEEEC
KVSQSDIPSEIQGEDGSLVIESISECLSVAFTPRGSHSQDLTQPQHINTMLYEAEAFARL
CCCCCCCCCHHCCCCCCCHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
VENNRVDHDGLHLSLLTSRIQTEIRRQTGVIFPADTQYPAAS
HHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]