Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
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Accession | NC_004088 |
Length | 4,600,755 |
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The map label for this gene is ygjP [H]
Identifier: 22127466
GI number: 22127466
Start: 3988214
End: 3988723
Strand: Direct
Name: ygjP [H]
Synonym: y3592
Alternate gene names: 22127466
Gene position: 3988214-3988723 (Clockwise)
Preceding gene: 22127465
Following gene: 22127467
Centisome position: 86.69
GC content: 44.51
Gene sequence:
>510_bases ATGTCGGTATTGACCTATCTACAAGGTTATCCAGAACACTTACAAACTCAAGTCCGCCAGTTGATCACTGAACAACGGTT GGGGAATGTCTTACGCCAACGCTATCCACAACCTCATGATTACAATACGGATAAAACGCTGTATCACTACACGATTGAAT TGAAGAACCAGTATCTGCGCAATGCACAGCCGTTGAGCAAAGTCGCCTATGACAACAAAATTCAAGTGATGAAGCATGCG CTAGGTCTGCACACGGCCATCTCTCGGGTACAAGGGGGGAAATTAAAATCCAAGGCGGAAATTCGGGTGGCTACAGTGTT TAAAAATGCCCCGGAGGCCTTCCTGAAAATGATTGTGGTCCACGAATTGGCACACCTGAAAGAAAAAGATCACAACAAAG CATTCTATAATCTGTGTTGCCATATGGAGCCGCAATATCATCAGCTAGAGTTTGATACCCGCCTCTATCTGACTCACTTA GATTTGTTTGGCTCGATTTATGCGTATTAG
Upstream 100 bases:
>100_bases TTTAATCCCCTATTCAGGCTATTATCGTTAGATGATTGATTTCTCTCACTGTTGCTCTTAACTTAATCAGAGTATTAATT TAACCAGAGTAGCCCCCTTT
Downstream 100 bases:
>100_bases ATTGATCAAAATATCGCTAAAGTCATTGGGCTTGCAGTTAATCTGCTGCGCCATCAAATACGAAGGGGTAACTCAAAATA ACCAAACTGTAGCTCTGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MSVLTYLQGYPEHLQTQVRQLITEQRLGNVLRQRYPQPHDYNTDKTLYHYTIELKNQYLRNAQPLSKVAYDNKIQVMKHA LGLHTAISRVQGGKLKSKAEIRVATVFKNAPEAFLKMIVVHELAHLKEKDHNKAFYNLCCHMEPQYHQLEFDTRLYLTHL DLFGSIYAY
Sequences:
>Translated_169_residues MSVLTYLQGYPEHLQTQVRQLITEQRLGNVLRQRYPQPHDYNTDKTLYHYTIELKNQYLRNAQPLSKVAYDNKIQVMKHA LGLHTAISRVQGGKLKSKAEIRVATVFKNAPEAFLKMIVVHELAHLKEKDHNKAFYNLCCHMEPQYHQLEFDTRLYLTHL DLFGSIYAY >Mature_168_residues SVLTYLQGYPEHLQTQVRQLITEQRLGNVLRQRYPQPHDYNTDKTLYHYTIELKNQYLRNAQPLSKVAYDNKIQVMKHAL GLHTAISRVQGGKLKSKAEIRVATVFKNAPEAFLKMIVVHELAHLKEKDHNKAFYNLCCHMEPQYHQLEFDTRLYLTHLD LFGSIYAY
Specific function: Unknown
COG id: COG1451
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082207, Length=162, Percent_Identity=77.7777777777778, Blast_Score=267, Evalue=3e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002725 [H]
Pfam domain/function: PF01863 DUF45 [H]
EC number: NA
Molecular weight: Translated: 19888; Mature: 19757
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVLTYLQGYPEHLQTQVRQLITEQRLGNVLRQRYPQPHDYNTDKTLYHYTIELKNQYLR CCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEHHHHHHHH NAQPLSKVAYDNKIQVMKHALGLHTAISRVQGGKLKSKAEIRVATVFKNAPEAFLKMIVV CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHCCCHHHHHHHHHH HELAHLKEKDHNKAFYNLCCHMEPQYHQLEFDTRLYLTHLDLFGSIYAY HHHHHHHHCCCCHHHHHHHHCCCCCHHEECCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure SVLTYLQGYPEHLQTQVRQLITEQRLGNVLRQRYPQPHDYNTDKTLYHYTIELKNQYLR CHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEHHHHHHHH NAQPLSKVAYDNKIQVMKHALGLHTAISRVQGGKLKSKAEIRVATVFKNAPEAFLKMIVV CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHCCCHHHHHHHHHH HELAHLKEKDHNKAFYNLCCHMEPQYHQLEFDTRLYLTHLDLFGSIYAY HHHHHHHHCCCCHHHHHHHHCCCCCHHEECCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]