Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
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Accession | NC_004088 |
Length | 4,600,755 |
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The map label for this gene is yegL [H]
Identifier: 22127458
GI number: 22127458
Start: 3974919
End: 3975620
Strand: Direct
Name: yegL [H]
Synonym: y3584
Alternate gene names: 22127458
Gene position: 3974919-3975620 (Clockwise)
Preceding gene: 22127456
Following gene: 22127459
Centisome position: 86.4
GC content: 51.57
Gene sequence:
>702_bases ATGCCATTGGTGAGCCTTCTGATTCTGACACCTTTGTCACTCATCTTAAGAACTACCTCTGATATGAGAAGGCTACCCGT TTATTTGCTGATTGACACCTCTGGGTCAATGCGCGGTGAATCCATCCATGCCGTCAATGTTGGCATTCAGGCGATGATGA GCGCACTGCGTCAAGACCCTTACGCACTTGAAAGCGTTCATCTCTCTATCATTACTTACGATAACCAAGCTCGGGAGTAT ATCCCCTTGACGGCACTGGAGAATTTCCAGTTCACCGATATTACTGTCCCCAGCGCGGGAGGCACATTCACCGGTGCAGC ACTTGAATGCCTGATCCATTGTGTTGATCGCGATATCCAACGATCTGATGGCGATCAGAAAGGCGACTGGCGTCCTCTGG TGTTTCTCATGACTGACAGCACCCCTTCAGATGTCTACGCTTACGGCGAGGCAATCAAAGAGGTTAAAAAGCGGGCGTTC GGCTCCATTATCGCCTGTGCTGTCGGCGCGAAGGCTAAACATGAACACCTCAAGCAACTGACCTCTCAGGTCGTGGCGCT TGAAACGCTGGATTCAACCGCATTTTCAGGTTTCTTCAAGTGGGTTTCGGCAAGCGTCGCCGCAGGAAGCTCAAGTGCGG GTATCAACACCGGGCAGGATAACCTACCGCCACCGCCCCCAGAAATTCAGTTGGTACTGTAA
Upstream 100 bases:
>100_bases GAAATGGCTCGCTTCAACCTCTCCGGTGGCCCCGCCTTTAATCAACAGTGTTCAATGCTATTTGCTGAACTGGTCCGTGA AAGTACAGGCTGGAAACTGA
Downstream 100 bases:
>100_bases TGTAAAGGCAAAGCCCCCATTCACGGCGCTTTGCCTTATTTTTTTGTCGCATCGGTAGCCAACTGGCACACATTGAAAAA ACCTAAGCCTGACGAGGTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MPLVSLLILTPLSLILRTTSDMRRLPVYLLIDTSGSMRGESIHAVNVGIQAMMSALRQDPYALESVHLSIITYDNQAREY IPLTALENFQFTDITVPSAGGTFTGAALECLIHCVDRDIQRSDGDQKGDWRPLVFLMTDSTPSDVYAYGEAIKEVKKRAF GSIIACAVGAKAKHEHLKQLTSQVVALETLDSTAFSGFFKWVSASVAAGSSSAGINTGQDNLPPPPPEIQLVL
Sequences:
>Translated_233_residues MPLVSLLILTPLSLILRTTSDMRRLPVYLLIDTSGSMRGESIHAVNVGIQAMMSALRQDPYALESVHLSIITYDNQAREY IPLTALENFQFTDITVPSAGGTFTGAALECLIHCVDRDIQRSDGDQKGDWRPLVFLMTDSTPSDVYAYGEAIKEVKKRAF GSIIACAVGAKAKHEHLKQLTSQVVALETLDSTAFSGFFKWVSASVAAGSSSAGINTGQDNLPPPPPEIQLVL >Mature_232_residues PLVSLLILTPLSLILRTTSDMRRLPVYLLIDTSGSMRGESIHAVNVGIQAMMSALRQDPYALESVHLSIITYDNQAREYI PLTALENFQFTDITVPSAGGTFTGAALECLIHCVDRDIQRSDGDQKGDWRPLVFLMTDSTPSDVYAYGEAIKEVKKRAFG SIIACAVGAKAKHEHLKQLTSQVVALETLDSTAFSGFFKWVSASVAAGSSSAGINTGQDNLPPPPPEIQLVL
Specific function: Unknown
COG id: COG4245
COG function: function code R; Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 VWFA domain [H]
Homologues:
Organism=Escherichia coli, GI1788388, Length=144, Percent_Identity=34.7222222222222, Blast_Score=68, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011392 - InterPro: IPR002035 [H]
Pfam domain/function: PF00092 VWA [H]
EC number: NA
Molecular weight: Translated: 25225; Mature: 25094
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: PS50234 VWFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLVSLLILTPLSLILRTTSDMRRLPVYLLIDTSGSMRGESIHAVNVGIQAMMSALRQDP CCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCEEEEEHHHHHHHHHHHHCCC YALESVHLSIITYDNQAREYIPLTALENFQFTDITVPSAGGTFTGAALECLIHCVDRDIQ CCHHEEEEEEEEECCCCCCEECEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHH RSDGDQKGDWRPLVFLMTDSTPSDVYAYGEAIKEVKKRAFGSIIACAVGAKAKHEHLKQL HCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH TSQVVALETLDSTAFSGFFKWVSASVAAGSSSAGINTGQDNLPPPPPEIQLVL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEC >Mature Secondary Structure PLVSLLILTPLSLILRTTSDMRRLPVYLLIDTSGSMRGESIHAVNVGIQAMMSALRQDP CHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCEEEEEHHHHHHHHHHHHCCC YALESVHLSIITYDNQAREYIPLTALENFQFTDITVPSAGGTFTGAALECLIHCVDRDIQ CCHHEEEEEEEEECCCCCCEECEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHH RSDGDQKGDWRPLVFLMTDSTPSDVYAYGEAIKEVKKRAFGSIIACAVGAKAKHEHLKQL HCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH TSQVVALETLDSTAFSGFFKWVSASVAAGSSSAGINTGQDNLPPPPPEIQLVL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]