Click here to switch to the map view.

The map label for this gene is 22127358

Identifier: 22127358

GI number: 22127358

Start: 3867160

End: 3868014

Strand: Direct

Name: 22127358

Synonym: y3484

Alternate gene names: NA

Gene position: 3867160-3868014 (Clockwise)

Preceding gene: 22127357

Following gene: 22127359

Centisome position: 84.05

GC content: 35.79

Gene sequence:

>855_bases
ATGAATCTATATCAACTAAAAGATAAAAAACAAAATATAATTATATTCTTGTCTATTGTTATTCTCTATTTTTTGTTTGA
AAATTCAGCTAACGCCAAGCAAATTTATCTGCCTATTGGTGGTTCACACATTATAAAAGTGCAGGAAGAGATTGATACCG
TTTTTGTCTCTGCCGCAAAAACAGCTGACTATGAAATAGTTGATAATAACAGTGTCATTATTTATGCCAAAAAAGAAGGC
TTAGCTGAATTCACTTTGTTCAACAAAAATCATCAGCCGATAAGCAAAACACGGGTGCTGGTGAATAATACTATTAATGA
TGCCTATCGAAGAATACGCACAGAGTTTCCTGATAGTAAGATAGAAATAAATAAAATAGGCGAAAGCTATATACTTACGG
GCAGTGCCGAAACCGAGGAAGCAAAAGATACCATTGCCAGCATTGTCGGCGAGGCGACTGCAAGTAAAAAAGAAAAAGAG
AGAGAAACGAGTTATCAAAGCAACCCTGAGTATCAGGGGGTTATTAATAAAATTAAATTACCTCAAGCCAATCAAGTTAA
TGTAAAGCTCACTATTGTAGAAATAACTAAAGATTTTACTGAAAACATAGGGCTAGATTGGAATTCAATAAAAAGTGCGG
CAGGCGCTTTTCAGTTTTTAAATTTTAATGCACAAAGCATCAGCACATTAGTCCATGCTATTAATGATGAGGCGATTGCC
AAAGTACTGGCAGAACCGAATCTATCGGTCTTATCCGGTGAATATGCCTCCTTCTTGGTCGGCGGTGAAATACCGATTGT
TAGCACCAATCAGAATGGTATTAGTGTCGAATTAAAGAGTTTGGCATTAAGTTAA

Upstream 100 bases:

>100_bases
AAGCCGGCGAGGTGTTTTTAACCCCCAAGAGTGGCGATCACAAACGAATAGATTTGGATGACATAATCCCTACGTTACAG
ACAATAAGAGAGCTAAGAGG

Downstream 100 bases:

>100_bases
ACATTGGTGCCAAAGTGAATGAGAAGAAACGTATCCGTGTCATGTTGGGTGAAGAGGTCAGCAGTATTGATAAGGTATTT
AATCTTAGGGGTGGGGACTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MNLYQLKDKKQNIIIFLSIVILYFLFENSANAKQIYLPIGGSHIIKVQEEIDTVFVSAAKTADYEIVDNNSVIIYAKKEG
LAEFTLFNKNHQPISKTRVLVNNTINDAYRRIRTEFPDSKIEINKIGESYILTGSAETEEAKDTIASIVGEATASKKEKE
RETSYQSNPEYQGVINKIKLPQANQVNVKLTIVEITKDFTENIGLDWNSIKSAAGAFQFLNFNAQSISTLVHAINDEAIA
KVLAEPNLSVLSGEYASFLVGGEIPIVSTNQNGISVELKSLALS

Sequences:

>Translated_284_residues
MNLYQLKDKKQNIIIFLSIVILYFLFENSANAKQIYLPIGGSHIIKVQEEIDTVFVSAAKTADYEIVDNNSVIIYAKKEG
LAEFTLFNKNHQPISKTRVLVNNTINDAYRRIRTEFPDSKIEINKIGESYILTGSAETEEAKDTIASIVGEATASKKEKE
RETSYQSNPEYQGVINKIKLPQANQVNVKLTIVEITKDFTENIGLDWNSIKSAAGAFQFLNFNAQSISTLVHAINDEAIA
KVLAEPNLSVLSGEYASFLVGGEIPIVSTNQNGISVELKSLALS
>Mature_284_residues
MNLYQLKDKKQNIIIFLSIVILYFLFENSANAKQIYLPIGGSHIIKVQEEIDTVFVSAAKTADYEIVDNNSVIIYAKKEG
LAEFTLFNKNHQPISKTRVLVNNTINDAYRRIRTEFPDSKIEINKIGESYILTGSAETEEAKDTIASIVGEATASKKEKE
RETSYQSNPEYQGVINKIKLPQANQVNVKLTIVEITKDFTENIGLDWNSIKSAAGAFQFLNFNAQSISTLVHAINDEAIA
KVLAEPNLSVLSGEYASFLVGGEIPIVSTNQNGISVELKSLALS

Specific function: Involved in the secretion of an unknown compound (Potential) [H]

COG id: COG4964

COG function: function code U; Flp pilus assembly protein, secretin CpaC

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 BON domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001775
- InterPro:   IPR004846
- InterPro:   IPR007055 [H]

Pfam domain/function: PF04972 BON; PF00263 Secretin [H]

EC number: NA

Molecular weight: Translated: 31455; Mature: 31455

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLYQLKDKKQNIIIFLSIVILYFLFENSANAKQIYLPIGGSHIIKVQEEIDTVFVSAAK
CCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEHHHHCEEEEEECC
TADYEIVDNNSVIIYAKKEGLAEFTLFNKNHQPISKTRVLVNNTINDAYRRIRTEFPDSK
CCCEEEEECCEEEEEEECCCCEEEEEECCCCCCHHHEEEEEECCHHHHHHHHHHCCCCCE
IEINKIGESYILTGSAETEEAKDTIASIVGEATASKKEKERETSYQSNPEYQGVINKIKL
EEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCC
PQANQVNVKLTIVEITKDFTENIGLDWNSIKSAAGAFQFLNFNAQSISTLVHAINDEAIA
CCCCCEEEEEEEEEEEHHHHHHCCCCHHHHHHHHHHEEEECCCHHHHHHHHHHHCHHHHH
KVLAEPNLSVLSGEYASFLVGGEIPIVSTNQNGISVELKSLALS
HHHCCCCCEEECCCHHEEEECCCEEEEECCCCCEEEEEEEEECC
>Mature Secondary Structure
MNLYQLKDKKQNIIIFLSIVILYFLFENSANAKQIYLPIGGSHIIKVQEEIDTVFVSAAK
CCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEHHHHCEEEEEECC
TADYEIVDNNSVIIYAKKEGLAEFTLFNKNHQPISKTRVLVNNTINDAYRRIRTEFPDSK
CCCEEEEECCEEEEEEECCCCEEEEEECCCCCCHHHEEEEEECCHHHHHHHHHHCCCCCE
IEINKIGESYILTGSAETEEAKDTIASIVGEATASKKEKERETSYQSNPEYQGVINKIKL
EEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCC
PQANQVNVKLTIVEITKDFTENIGLDWNSIKSAAGAFQFLNFNAQSISTLVHAINDEAIA
CCCCCEEEEEEEEEEEHHHHHHCCCCHHHHHHHHHHEEEECCCHHHHHHHHHHHCHHHHH
KVLAEPNLSVLSGEYASFLVGGEIPIVSTNQNGISVELKSLALS
HHHCCCCCEEECCCHHEEEECCCEEEEECCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]