Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
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Accession | NC_004088 |
Length | 4,600,755 |
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The map label for this gene is 22127306
Identifier: 22127306
GI number: 22127306
Start: 3814743
End: 3816083
Strand: Direct
Name: 22127306
Synonym: y3431
Alternate gene names: NA
Gene position: 3814743-3816083 (Clockwise)
Preceding gene: 22127305
Following gene: 22127307
Centisome position: 82.92
GC content: 46.16
Gene sequence:
>1341_bases TTGTCAGGAAGGATATTTGGTATGGAAACCCCAGGGGTAAGTAATCCTATTGAGCGTCGTTTTATGCAGGCGCATGATGA CTGGTTAACGTTTGCCGGCAATAAAAAAGCGAAATTATTATTATGGCAAGCGAATGAAGCCGATGAACCTTTGCTTAAAA CCTATTTTCAGGTGCAGGAAGAGAATGCCTGTGCGGTTATTCAATTTGATGATGTTTTTGAAACGGCAGAGCAATTTACT GATGCGATAATAAAGCACATTATTCATTTTTATCATCAACGGCGTGAGGGGTCTGCGGCGGCGGGAATTACTGCCGATTG GCACCCCCCTGAACTTACCTCACCGGGTTCTCATCAGGTGCTATTTACTATCGCGAAAAGCCTTATTCAGCATCATCCCG ATGTTTTCCCAGGATTTGTTTGGGTATTCAGACCCAATATTGTTGTTTCCGAACCGCGCTTTACTGAATGGCTTTTAACA TTAACCGCGGATCTCTGTCTTGACCCCTGGCTTGCCGAGCGCCTGCGTTTGGTTCTTTACGGTGAGCTTTCAGACGGTAT TCAATCCTTATCACAGGCTGCGCCTGAAAATATTCAGTTGATTAACGGCGTATATCATATGGCCGGTGCGCCGGGTGAAA TGGTTGAGGAATCCACGGAGCGGGGGCCGGGTGCTGATTTTCGTCGTTTATTTATTGCCCTAACAGAAACAATCCCATTG AATGACCCTTCGCGTCTGGCGCGCTTACAAAAGCAGGCGTTGAATATTTCACAAAAAGAGGGCTGGTTCGATCAAAGCGT AGTGATTTATTTATTAGTGGGAGCCGCACAATTAAAATGGCAGGATTTCCCACGAGCATTAAGCGCTTATCAATCAGCGG CGCAAGAAGGCGAGAATGCCATAATAGCGGACCATCCTGCGGGCAATAAGTTGGTTGCGAATGCATTATTTGGTGAAGCC AGTGTTTATTTCAGCCAAAAAGAATATGCCATGGCAGCACAATGCTATGAAAGTATTGCGCCTTATACCGAGGCGGCGGC TGATGCGGTATTAACGATTGAAACCTGGCGTATGAGTGCTTATTGCTGGTGGGAAGATAATTATTTTACGCTGGCCTGGA ATGCCGGATTGAATGCATTGAAAATCGGCTTACCGCTGGGCGACGATATAAAAACTAACAGTAGCCTTGGCGTCGCGGCT TATTGGATGCATCAACATTATGGGCGCTGGGAGAATTATGACGATGAGCTGCGCACTGTTCTTTCTGCGCTATACGGTGA TGAATGGCTAGATATTATCACGCCGCTTGATCAAAGAAATATAACGTTAGCCGCAGGCTAA
Upstream 100 bases:
>100_bases GCATCGACGACACATACGATAAAAGCTAAAACAGTGACATCCTGCGGTGATACGGAAAATATCGTGGAAGGTGGCATTCT AAAATTAAATCCTTAACGTA
Downstream 100 bases:
>100_bases TCAGGGAGCGATAATGGCAATGCCAGCGGTAAAACATTTTGATCCGGTCATTGGGCTGGATGTCCATACGGTCATTATTC CTCCCTCACCGGCTCCTATC
Product: hypothetical protein
Products: NA
Alternate protein names: TPR Repeat-Containing Protein
Number of amino acids: Translated: 446; Mature: 445
Protein sequence:
>446_residues MSGRIFGMETPGVSNPIERRFMQAHDDWLTFAGNKKAKLLLWQANEADEPLLKTYFQVQEENACAVIQFDDVFETAEQFT DAIIKHIIHFYHQRREGSAAAGITADWHPPELTSPGSHQVLFTIAKSLIQHHPDVFPGFVWVFRPNIVVSEPRFTEWLLT LTADLCLDPWLAERLRLVLYGELSDGIQSLSQAAPENIQLINGVYHMAGAPGEMVEESTERGPGADFRRLFIALTETIPL NDPSRLARLQKQALNISQKEGWFDQSVVIYLLVGAAQLKWQDFPRALSAYQSAAQEGENAIIADHPAGNKLVANALFGEA SVYFSQKEYAMAAQCYESIAPYTEAAADAVLTIETWRMSAYCWWEDNYFTLAWNAGLNALKIGLPLGDDIKTNSSLGVAA YWMHQHYGRWENYDDELRTVLSALYGDEWLDIITPLDQRNITLAAG
Sequences:
>Translated_446_residues MSGRIFGMETPGVSNPIERRFMQAHDDWLTFAGNKKAKLLLWQANEADEPLLKTYFQVQEENACAVIQFDDVFETAEQFT DAIIKHIIHFYHQRREGSAAAGITADWHPPELTSPGSHQVLFTIAKSLIQHHPDVFPGFVWVFRPNIVVSEPRFTEWLLT LTADLCLDPWLAERLRLVLYGELSDGIQSLSQAAPENIQLINGVYHMAGAPGEMVEESTERGPGADFRRLFIALTETIPL NDPSRLARLQKQALNISQKEGWFDQSVVIYLLVGAAQLKWQDFPRALSAYQSAAQEGENAIIADHPAGNKLVANALFGEA SVYFSQKEYAMAAQCYESIAPYTEAAADAVLTIETWRMSAYCWWEDNYFTLAWNAGLNALKIGLPLGDDIKTNSSLGVAA YWMHQHYGRWENYDDELRTVLSALYGDEWLDIITPLDQRNITLAAG >Mature_445_residues SGRIFGMETPGVSNPIERRFMQAHDDWLTFAGNKKAKLLLWQANEADEPLLKTYFQVQEENACAVIQFDDVFETAEQFTD AIIKHIIHFYHQRREGSAAAGITADWHPPELTSPGSHQVLFTIAKSLIQHHPDVFPGFVWVFRPNIVVSEPRFTEWLLTL TADLCLDPWLAERLRLVLYGELSDGIQSLSQAAPENIQLINGVYHMAGAPGEMVEESTERGPGADFRRLFIALTETIPLN DPSRLARLQKQALNISQKEGWFDQSVVIYLLVGAAQLKWQDFPRALSAYQSAAQEGENAIIADHPAGNKLVANALFGEAS VYFSQKEYAMAAQCYESIAPYTEAAADAVLTIETWRMSAYCWWEDNYFTLAWNAGLNALKIGLPLGDDIKTNSSLGVAAY WMHQHYGRWENYDDELRTVLSALYGDEWLDIITPLDQRNITLAAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50162; Mature: 50031
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGRIFGMETPGVSNPIERRFMQAHDDWLTFAGNKKAKLLLWQANEADEPLLKTYFQVQE CCCEEEECCCCCCCCHHHHHHHHHCCCEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHC ENACAVIQFDDVFETAEQFTDAIIKHIIHFYHQRREGSAAAGITADWHPPELTSPGSHQV CCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHH LFTIAKSLIQHHPDVFPGFVWVFRPNIVVSEPRFTEWLLTLTADLCLDPWLAERLRLVLY HHHHHHHHHHHCCCCCCCEEEEEECCEEEECCCHHHHHHHHHHHHHCCHHHHHHEEEEEE GELSDGIQSLSQAAPENIQLINGVYHMAGAPGEMVEESTERGPGADFRRLFIALTETIPL ECHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCC NDPSRLARLQKQALNISQKEGWFDQSVVIYLLVGAAQLKWQDFPRALSAYQSAAQEGENA CCHHHHHHHHHHHHCCCHHCCCCCCHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHCCCCC IIADHPAGNKLVANALFGEASVYFSQKEYAMAAQCYESIAPYTEAAADAVLTIETWRMSA EEEECCCCCCEEHHHHHCCHHEEECHHHHHHHHHHHHHHCCHHHHHCCEEEEEEEEEEEE YCWWEDNYFTLAWNAGLNALKIGLPLGDDIKTNSSLGVAAYWMHQHYGRWENYDDELRTV EEEEECCEEEEEECCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHH LSALYGDEWLDIITPLDQRNITLAAG HHHHHCCCHHHHHCCCCCCCEEEECC >Mature Secondary Structure SGRIFGMETPGVSNPIERRFMQAHDDWLTFAGNKKAKLLLWQANEADEPLLKTYFQVQE CCEEEECCCCCCCCHHHHHHHHHCCCEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHC ENACAVIQFDDVFETAEQFTDAIIKHIIHFYHQRREGSAAAGITADWHPPELTSPGSHQV CCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHH LFTIAKSLIQHHPDVFPGFVWVFRPNIVVSEPRFTEWLLTLTADLCLDPWLAERLRLVLY HHHHHHHHHHHCCCCCCCEEEEEECCEEEECCCHHHHHHHHHHHHHCCHHHHHHEEEEEE GELSDGIQSLSQAAPENIQLINGVYHMAGAPGEMVEESTERGPGADFRRLFIALTETIPL ECHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCC NDPSRLARLQKQALNISQKEGWFDQSVVIYLLVGAAQLKWQDFPRALSAYQSAAQEGENA CCHHHHHHHHHHHHCCCHHCCCCCCHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHCCCCC IIADHPAGNKLVANALFGEASVYFSQKEYAMAAQCYESIAPYTEAAADAVLTIETWRMSA EEEECCCCCCEEHHHHHCCHHEEECHHHHHHHHHHHHHHCCHHHHHCCEEEEEEEEEEEE YCWWEDNYFTLAWNAGLNALKIGLPLGDDIKTNSSLGVAAYWMHQHYGRWENYDDELRTV EEEEECCEEEEEECCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHH LSALYGDEWLDIITPLDQRNITLAAG HHHHHCCCHHHHHCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA